RNA–Protein interactions for RNA: ENST00000200181.7

ITGB4-201, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene ITGB4, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-201ENST00000200181 ZSCAN23Q3MJ62 389 aa19.66■□□□□ 0.74
ITGB4-201ENST00000200181 MCM10Q7L590 875 aa19.66■□□□□ 0.74
ITGB4-201ENST00000200181 CCDC144CPQ8IYA2 1237 aa19.66■□□□□ 0.74
ITGB4-201ENST00000200181 EVI5LQ96CN4 794 aa19.66■□□□□ 0.74
ITGB4-201ENST00000200181 ATAD2Q6PL18 1390 aa19.66■□□□□ 0.74
ITGB4-201ENST00000200181 ANKS4BQ8N8V4 417 aa19.66■□□□□ 0.74
ITGB4-201ENST00000200181 ZNF830Q96NB3 372 aaPredicted RBP19.66■□□□□ 0.74
ITGB4-201ENST00000200181 SELENOOQ9BVL4 669 aa19.66■□□□□ 0.74
ITGB4-201ENST00000200181 KIF5BP33176 963 aa19.65■□□□□ 0.74
ITGB4-201ENST00000200181 UBASH3AP57075 661 aa19.65■□□□□ 0.74
ITGB4-201ENST00000200181 STMN4Q9H169 189 aaPredicted RBP19.65■□□□□ 0.74
ITGB4-201ENST00000200181 TMEM67Q5HYA8 995 aa19.65■□□□□ 0.74
ITGB4-201ENST00000200181 MMRN2Q9H8L6 949 aa19.65■□□□□ 0.74
ITGB4-201ENST00000200181 AEBP2Q6ZN18 517 aaPredicted RBP19.65■□□□□ 0.74
ITGB4-201ENST00000200181 NAP1L3Q99457 506 aaPredicted RBP19.65■□□□□ 0.74
ITGB4-201ENST00000200181 CCDC174Q6PII3 467 aa19.64■□□□□ 0.74
ITGB4-201ENST00000200181 MICALL1Q8N3F8 863 aa19.64■□□□□ 0.74
ITGB4-201ENST00000200181 SMC6Q96SB8 1091 aa19.64■□□□□ 0.74
ITGB4-201ENST00000200181 CTAGE1Q96RT6 745 aa19.64■□□□□ 0.73
ITGB4-201ENST00000200181 CCDC77Q9BR77 488 aa19.64■□□□□ 0.73
ITGB4-201ENST00000200181 ORC3Q9UBD5 711 aaPredicted RBP19.64■□□□□ 0.73
ITGB4-201ENST00000200181 SLF2Q8IX21 1173 aa19.64■□□□□ 0.73
ITGB4-201ENST00000200181 RARSP54136 660 aaKnown RBP19.64■□□□□ 0.73
ITGB4-201ENST00000200181 MCM6Q14566 821 aa19.64■□□□□ 0.73
ITGB4-201ENST00000200181 THUMPD2Q9BTF0 503 aaKnown RBP19.64■□□□□ 0.73
ITGB4-201ENST00000200181 LRSAM1Q6UWE0 723 aa19.63■□□□□ 0.73
ITGB4-201ENST00000200181 CCDC121Q6ZUS5 278 aa19.63■□□□□ 0.73
ITGB4-201ENST00000200181 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.63■□□□□ 0.73
ITGB4-201ENST00000200181 V9GYY5 206 aaPredicted RBP19.63■□□□□ 0.73
ITGB4-201ENST00000200181 METAP2P50579 478 aaKnown RBP eCLIP19.63■□□□□ 0.73
ITGB4-201ENST00000200181 KLHL40Q2TBA0 621 aa19.63■□□□□ 0.73
ITGB4-201ENST00000200181 WDR78Q5VTH9 848 aa19.63■□□□□ 0.73
ITGB4-201ENST00000200181 RRAGBQ5VZM2 374 aa19.63■□□□□ 0.73
ITGB4-201ENST00000200181 SSH1Q8WYL5 1049 aa19.63■□□□□ 0.73
ITGB4-201ENST00000200181 NSD3Q9BZ95 1437 aa19.63■□□□□ 0.73
ITGB4-201ENST00000200181 KIAA1107Q9UPP5 1409 aa19.63■□□□□ 0.73
ITGB4-201ENST00000200181 DNAI1Q9UI46 699 aa19.63■□□□□ 0.73
ITGB4-201ENST00000200181 TBCAO75347 108 aaKnown RBP19.63■□□□□ 0.73
ITGB4-201ENST00000200181 HCLS1P14317 486 aaPredicted RBP19.63■□□□□ 0.73
ITGB4-201ENST00000200181 TMEM87AQ8NBN3 555 aa19.63■□□□□ 0.73
ITGB4-201ENST00000200181 NBPF8Q3BBV2 869 aa19.63■□□□□ 0.73
ITGB4-201ENST00000200181 TRMT1LQ7Z2T5 733 aaKnown RBP19.63■□□□□ 0.73
ITGB4-201ENST00000200181 LRRC45Q96CN5 670 aa19.63■□□□□ 0.73
ITGB4-201ENST00000200181 TTC14Q96N46 770 aa19.63■□□□□ 0.73
ITGB4-201ENST00000200181 ANAPC4Q9UJX5 808 aa19.63■□□□□ 0.73
ITGB4-201ENST00000200181 TTC16Q8NEE8 873 aa19.62■□□□□ 0.73
ITGB4-201ENST00000200181 ARL1P40616 181 aaPredicted RBP19.62■□□□□ 0.73
ITGB4-201ENST00000200181 GIMAP6Q6P9H5 292 aa19.62■□□□□ 0.73
ITGB4-201ENST00000200181 DDX46Q7L014 1031 aaKnown RBP19.62■□□□□ 0.73
ITGB4-201ENST00000200181 FANCD2Q9BXW9 1451 aa19.62■□□□□ 0.73
ITGB4-201ENST00000200181 TAF7Q15545 349 aaPredicted RBP19.62■□□□□ 0.73
ITGB4-201ENST00000200181 CCDC129Q6ZRS4 1044 aa19.62■□□□□ 0.73
ITGB4-201ENST00000200181 SLC26A6Q9BXS9 759 aa19.62■□□□□ 0.73
ITGB4-201ENST00000200181 OSCARQ8IYS5 282 aa19.62■□□□□ 0.73
ITGB4-201ENST00000200181 KAT14Q9H8E8 782 aa19.62■□□□□ 0.73
ITGB4-201ENST00000200181 SKILP12757 684 aa19.61■□□□□ 0.73
ITGB4-201ENST00000200181 CCDC184Q52MB2 194 aa19.61■□□□□ 0.73
ITGB4-201ENST00000200181 BICD1Q96G01 975 aa19.61■□□□□ 0.73
ITGB4-201ENST00000200181 SPAG5Q96R06 1193 aa19.61■□□□□ 0.73
ITGB4-201ENST00000200181 SYNCQ9H7C4 482 aa19.61■□□□□ 0.73
ITGB4-201ENST00000200181 SYKP43405 635 aa19.61■□□□□ 0.73
ITGB4-201ENST00000200181 SELENOSQ9BQE4 189 aa19.61■□□□□ 0.73
ITGB4-201ENST00000200181 ZSCAN16Q9H4T2 348 aaPredicted RBP19.61■□□□□ 0.73
ITGB4-201ENST00000200181 ZPR1O75312 459 aa19.61■□□□□ 0.73
ITGB4-201ENST00000200181 VAT1LQ9HCJ6 419 aa19.61■□□□□ 0.73
ITGB4-201ENST00000200181 SAMM50Q9Y512 469 aa19.61■□□□□ 0.73
ITGB4-201ENST00000200181 NKTRP30414 1462 aaKnown RBP19.61■□□□□ 0.73
ITGB4-201ENST00000200181 NOL3O60936 208 aaKnown RBP19.61■□□□□ 0.73
ITGB4-201ENST00000200181 NOLC1Q14978 699 aaKnown RBP eCLIP19.61■□□□□ 0.73
ITGB4-201ENST00000200181 CEP57Q86XR8 500 aa19.61■□□□□ 0.73
ITGB4-201ENST00000200181 AFAP1Q8N556 730 aa19.61■□□□□ 0.73
ITGB4-201ENST00000200181 TTC12Q9H892 705 aaPredicted RBP19.61■□□□□ 0.73
ITGB4-201ENST00000200181 ZWINTO95229 277 aa19.61■□□□□ 0.73
ITGB4-201ENST00000200181 IRX3P78415 501 aaPredicted RBP19.61■□□□□ 0.73
ITGB4-201ENST00000200181 ZBTB16Q05516 673 aa19.61■□□□□ 0.73
ITGB4-201ENST00000200181 PRPHP41219 470 aa19.6■□□□□ 0.73
ITGB4-201ENST00000200181 MICU3Q86XE3 530 aa19.6■□□□□ 0.73
ITGB4-201ENST00000200181 NEK1Q96PY6 1258 aa19.6■□□□□ 0.73
ITGB4-201ENST00000200181 WDHD1O75717 1129 aaPredicted RBP19.6■□□□□ 0.73
ITGB4-201ENST00000200181 MRPS9P82933 396 aaKnown RBP19.6■□□□□ 0.73
ITGB4-201ENST00000200181 TBC1D9Q6ZT07 1266 aa19.6■□□□□ 0.73
ITGB4-201ENST00000200181 TMOD3Q9NYL9 352 aa19.6■□□□□ 0.73
ITGB4-201ENST00000200181 CEP83Q9Y592 693 aa19.6■□□□□ 0.73
ITGB4-201ENST00000200181 KRT13P13646 458 aa19.6■□□□□ 0.73
ITGB4-201ENST00000200181 TTF1Q15361 905 aaPredicted RBP19.6■□□□□ 0.73
ITGB4-201ENST00000200181 CCDC63Q8NA47 563 aa19.6■□□□□ 0.73
ITGB4-201ENST00000200181 C11orf95C9JLR9 678 aaPredicted RBP19.6■□□□□ 0.73
ITGB4-201ENST00000200181 SEPT6Q14141 434 aa19.6■□□□□ 0.73
ITGB4-201ENST00000200181 C20orf194Q5TEA3 1177 aa19.6■□□□□ 0.73
ITGB4-201ENST00000200181 PTCD1O75127 700 aaKnown RBP19.59■□□□□ 0.73
ITGB4-201ENST00000200181 TACC1O75410 805 aa19.59■□□□□ 0.73
ITGB4-201ENST00000200181 PSMC4P43686 418 aa19.59■□□□□ 0.73
ITGB4-201ENST00000200181 ANO6Q4KMQ2 910 aa19.59■□□□□ 0.73
ITGB4-201ENST00000200181 THEMISQ8N1K5 641 aaPredicted RBP19.59■□□□□ 0.73
ITGB4-201ENST00000200181 F6X3S4 739 aa19.59■□□□□ 0.73
ITGB4-201ENST00000200181 CAPN2P17655 700 aa19.59■□□□□ 0.73
ITGB4-201ENST00000200181 RGS22Q8NE09 1264 aa19.59■□□□□ 0.73
ITGB4-201ENST00000200181 NCOA7Q8NI08 942 aa19.59■□□□□ 0.73
ITGB4-201ENST00000200181 ZNF526Q8TF50 670 aaPredicted RBP19.59■□□□□ 0.73
ITGB4-201ENST00000200181 GOLGA1Q92805 767 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms