RNA–Protein interactions for RNA: ENST00000081029.7

MRPS35-201, Transcript of mitochondrial ribosomal protein S35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS35, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-201ENST00000081029 ATP10DQ9P241 1426 aa13.44□□□□□ -0.26
MRPS35-201ENST00000081029 H0YIN7 160 aa13.44□□□□□ -0.26
MRPS35-201ENST00000081029 PDE6BP35913 854 aa13.44□□□□□ -0.26
MRPS35-201ENST00000081029 SLC4A10Q6U841 1118 aa13.44□□□□□ -0.26
MRPS35-201ENST00000081029 SYNE4Q8N205 404 aa13.44□□□□□ -0.26
MRPS35-201ENST00000081029 MRPL50Q8N5N7 158 aaKnown RBP13.44□□□□□ -0.26
MRPS35-201ENST00000081029 JARID2Q92833 1246 aaPredicted RBP13.44□□□□□ -0.26
MRPS35-201ENST00000081029 ZNF622Q969S3 477 aaKnown RBP eCLIP13.44□□□□□ -0.26
MRPS35-201ENST00000081029 C10orf71Q711Q0 1435 aa13.43□□□□□ -0.26
MRPS35-201ENST00000081029 FAM89AQ96GI7 184 aa13.43□□□□□ -0.26
MRPS35-201ENST00000081029 BCS1LQ9Y276 419 aa13.43□□□□□ -0.26
MRPS35-201ENST00000081029 ADCY9O60503 1353 aa13.42□□□□□ -0.26
MRPS35-201ENST00000081029 NTSR2O95665 410 aa13.42□□□□□ -0.26
MRPS35-201ENST00000081029 CT47B1P0C2W7 299 aaPredicted RBP13.42□□□□□ -0.26
MRPS35-201ENST00000081029 CWF19L2Q2TBE0 894 aaKnown RBP13.42□□□□□ -0.26
MRPS35-201ENST00000081029 DNAAF4Q8WXU2 420 aa13.42□□□□□ -0.26
MRPS35-201ENST00000081029 ISCA1Q9BUE6 129 aa13.42□□□□□ -0.26
MRPS35-201ENST00000081029 PLIN1O60240 522 aa13.42□□□□□ -0.26
MRPS35-201ENST00000081029 HCLS1P14317 486 aaPredicted RBP13.42□□□□□ -0.26
MRPS35-201ENST00000081029 ALDH1L2Q3SY69 923 aa13.42□□□□□ -0.26
MRPS35-201ENST00000081029 PIM2Q9P1W9 311 aa13.42□□□□□ -0.26
MRPS35-201ENST00000081029 N4BP2Q86UW6 1770 aaPredicted RBP13.41□□□□□ -0.26
MRPS35-201ENST00000081029 GOLGB1Q14789 3259 aaKnown RBP13.41□□□□□ -0.26
MRPS35-201ENST00000081029 KCNA3P22001 575 aa13.41□□□□□ -0.26
MRPS35-201ENST00000081029 RARSP54136 660 aaKnown RBP13.41□□□□□ -0.26
MRPS35-201ENST00000081029 CWC25Q9NXE8 425 aaPredicted RBP13.41□□□□□ -0.26
MRPS35-201ENST00000081029 NOB1Q9ULX3 412 aaKnown RBP13.41□□□□□ -0.26
MRPS35-201ENST00000081029 PXDNLA1KZ92 1463 aa13.41□□□□□ -0.26
MRPS35-201ENST00000081029 SH3TC1Q8TE82 1336 aa13.41□□□□□ -0.26
MRPS35-201ENST00000081029 CCDC191Q8NCU4 936 aa13.4□□□□□ -0.26
MRPS35-201ENST00000081029 FRAT1Q92837 279 aaPredicted RBP13.4□□□□□ -0.26
MRPS35-201ENST00000081029 ZNF219Q9P2Y4 722 aaPredicted RBP13.4□□□□□ -0.26
MRPS35-201ENST00000081029 ARFGEF2Q9Y6D5 1785 aa13.4□□□□□ -0.26
MRPS35-201ENST00000081029 CACNA1FO60840 1977 aa13.4□□□□□ -0.26
MRPS35-201ENST00000081029 BCAR3O75815 825 aa13.4□□□□□ -0.26
MRPS35-201ENST00000081029 IGKV5-2P06315 115 aa13.4□□□□□ -0.26
MRPS35-201ENST00000081029 YBX3P16989 372 aaKnown RBP eCLIP13.4□□□□□ -0.261e-6■□□□□ 10.5
MRPS35-201ENST00000081029 TRIM28Q13263 835 aaKnown RBP13.4□□□□□ -0.26
MRPS35-201ENST00000081029 NLRP3Q96P20 1036 aa13.4□□□□□ -0.26
MRPS35-201ENST00000081029 PPP4R2Q9NY27 417 aa13.4□□□□□ -0.26
MRPS35-201ENST00000081029 ABCC12Q96J65 1359 aa13.39□□□□□ -0.27
MRPS35-201ENST00000081029 NRXN2Q9P2S2 1712 aa13.39□□□□□ -0.27
MRPS35-201ENST00000081029 DALRD3Q5D0E6 543 aaKnown RBP13.39□□□□□ -0.27
MRPS35-201ENST00000081029 NEURL1BA8MQ27 555 aa13.38□□□□□ -0.27
MRPS35-201ENST00000081029 SRGNP10124 158 aa13.38□□□□□ -0.27
MRPS35-201ENST00000081029 TTLL6Q8N841 843 aa13.38□□□□□ -0.27
MRPS35-201ENST00000081029 ZBTB38Q8NAP3 1195 aaPredicted RBP13.38□□□□□ -0.27
MRPS35-201ENST00000081029 RPGRQ92834 1020 aaKnown RBP13.38□□□□□ -0.27
MRPS35-201ENST00000081029 UTRNP46939 3433 aa13.38□□□□□ -0.27
MRPS35-201ENST00000081029 KIF13BQ9NQT8 1826 aa13.38□□□□□ -0.27
MRPS35-201ENST00000081029 IRS4O14654 1257 aaPredicted RBP13.38□□□□□ -0.27
MRPS35-201ENST00000081029 C3orf67Q6ZVT6 689 aa13.38□□□□□ -0.27
MRPS35-201ENST00000081029 LINS1Q8NG48 757 aa13.38□□□□□ -0.27
MRPS35-201ENST00000081029 MASTLQ96GX5 879 aa13.38□□□□□ -0.27
MRPS35-201ENST00000081029 PTPRCP08575 1304 aa13.37□□□□□ -0.27
MRPS35-201ENST00000081029 ANKRD36CQ5JPF3 1778 aa13.37□□□□□ -0.27
MRPS35-201ENST00000081029 SLC10A5Q5PT55 438 aa13.37□□□□□ -0.27
MRPS35-201ENST00000081029 BEND3Q5T5X7 828 aa13.37□□□□□ -0.27
MRPS35-201ENST00000081029 UBE3BQ7Z3V4 1068 aa13.37□□□□□ -0.27
MRPS35-201ENST00000081029 PDZRN3Q9UPQ7 1066 aa13.37□□□□□ -0.27
MRPS35-201ENST00000081029 ANKRD31Q8N7Z5 1873 aa13.36□□□□□ -0.27
MRPS35-201ENST00000081029 NPR1P16066 1061 aa13.36□□□□□ -0.27
MRPS35-201ENST00000081029 GCKRQ14397 625 aa13.36□□□□□ -0.27
MRPS35-201ENST00000081029 ARHGAP27Q6ZUM4 889 aa13.36□□□□□ -0.27
MRPS35-201ENST00000081029 CCDC85AQ96PX6 553 aaPredicted RBP13.36□□□□□ -0.27
MRPS35-201ENST00000081029 SRCIN1Q9C0H9 1055 aa13.36□□□□□ -0.27
MRPS35-201ENST00000081029 IBTKQ9P2D0 1353 aaPredicted RBP13.36□□□□□ -0.27
MRPS35-201ENST00000081029 PCCAP05165 728 aaPredicted RBP13.36□□□□□ -0.27
MRPS35-201ENST00000081029 C20orf194Q5TEA3 1177 aa13.36□□□□□ -0.27
MRPS35-201ENST00000081029 STYK1Q6J9G0 422 aa13.36□□□□□ -0.27
MRPS35-201ENST00000081029 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.36□□□□□ -0.27
MRPS35-201ENST00000081029 EXOC6Q8TAG9 804 aa13.36□□□□□ -0.27
MRPS35-201ENST00000081029 CNKSR1Q969H4 720 aa13.36□□□□□ -0.27
MRPS35-201ENST00000081029 C9orf78Q9NZ63 289 aaPredicted RBP13.36□□□□□ -0.27
MRPS35-201ENST00000081029 KLRG2A4D1S0 409 aaPredicted RBP13.35□□□□□ -0.27
MRPS35-201ENST00000081029 C21orf2O43822 256 aa13.35□□□□□ -0.27
MRPS35-201ENST00000081029 GRIN3BO60391 1043 aa13.35□□□□□ -0.27
MRPS35-201ENST00000081029 CLUAP1Q96AJ1 413 aa13.35□□□□□ -0.27
MRPS35-201ENST00000081029 RBM17Q96I25 401 aaKnown RBP13.35□□□□□ -0.27
MRPS35-201ENST00000081029 KIF16BQ96L93 1317 aa13.34□□□□□ -0.27
MRPS35-201ENST00000081029 IPO8O15397 1037 aaKnown RBP13.34□□□□□ -0.27
MRPS35-201ENST00000081029 ALDH1B1P30837 517 aa13.34□□□□□ -0.27
MRPS35-201ENST00000081029 PRPF40BQ6NWY9 871 aaKnown RBP13.34□□□□□ -0.27
MRPS35-201ENST00000081029 API5Q9BZZ5 524 aaKnown RBP13.34□□□□□ -0.27
MRPS35-201ENST00000081029 HSP90B1P14625 803 aaKnown RBP13.33□□□□□ -0.27
MRPS35-201ENST00000081029 CRY2Q49AN0 593 aa13.33□□□□□ -0.27
MRPS35-201ENST00000081029 DDX46Q7L014 1031 aaKnown RBP13.33□□□□□ -0.27
MRPS35-201ENST00000081029 KIAA1551Q9HCM1 1747 aa13.33□□□□□ -0.28
MRPS35-201ENST00000081029 H7C1W4 665 aa13.33□□□□□ -0.28
MRPS35-201ENST00000081029 PDE8AO60658 829 aa13.33□□□□□ -0.28
MRPS35-201ENST00000081029 BRPF1P55201 1214 aaPredicted RBP13.33□□□□□ -0.28
MRPS35-201ENST00000081029 CRBNQ96SW2 442 aa13.33□□□□□ -0.28
MRPS35-201ENST00000081029 TNRC6CQ9HCJ0 1690 aaKnown RBP13.32□□□□□ -0.28
MRPS35-201ENST00000081029 ALDH1L1O75891 902 aa13.32□□□□□ -0.28
MRPS35-201ENST00000081029 TNNQ9UQP3 1299 aa13.32□□□□□ -0.28
MRPS35-201ENST00000081029 GRM8O00222 908 aa13.31□□□□□ -0.28
MRPS35-201ENST00000081029 ZKSCAN2Q63HK3 967 aa13.31□□□□□ -0.28
MRPS35-201ENST00000081029 B4GALNT3Q6L9W6 998 aa13.31□□□□□ -0.28
MRPS35-201ENST00000081029 OLFM4Q6UX06 510 aa13.31□□□□□ -0.28
MRPS35-201ENST00000081029 ATF7IPQ6VMQ6 1270 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms