RNA–Protein interactions for RNA: ENST00000039989.8

TTC17-201, Transcript of tetratricopeptide repeat domain 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC17, Length 4,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC17-201ENST00000039989 ATP2B3Q16720 1220 aa13.05□□□□□ -0.32
TTC17-201ENST00000039989 TTC22Q5TAA0 569 aa13.05□□□□□ -0.32
TTC17-201ENST00000039989 RAB11FIP4Q86YS3 637 aa13.05□□□□□ -0.32
TTC17-201ENST00000039989 PIBF1Q8WXW3 757 aa13.05□□□□□ -0.32
TTC17-201ENST00000039989 UBR1Q8IWV7 1749 aa13.05□□□□□ -0.32
TTC17-201ENST00000039989 CPLX1O14810 134 aa13.05□□□□□ -0.32
TTC17-201ENST00000039989 ATP2B2Q01814 1243 aa13.05□□□□□ -0.32
TTC17-201ENST00000039989 DBNDD2Q9BQY9 259 aa13.05□□□□□ -0.32
TTC17-201ENST00000039989 MINDY4BA8MYZ0 360 aa13.05□□□□□ -0.32
TTC17-201ENST00000039989 PLEKHM2Q8IWE5 1019 aa13.05□□□□□ -0.32
TTC17-201ENST00000039989 H3BQV1 296 aa13.05□□□□□ -0.32
TTC17-201ENST00000039989 HOXB7P09629 217 aa13.05□□□□□ -0.32
TTC17-201ENST00000039989 CCDC152Q4G0S7 254 aa13.05□□□□□ -0.32
TTC17-201ENST00000039989 IFFO2Q5TF58 517 aa13.05□□□□□ -0.32
TTC17-201ENST00000039989 TPTE2Q6XPS3 522 aa13.05□□□□□ -0.32
TTC17-201ENST00000039989 KIAA1210Q9ULL0 1709 aa13.05□□□□□ -0.32
TTC17-201ENST00000039989 ABCC4O15439 1325 aa13.04□□□□□ -0.32
TTC17-201ENST00000039989 SOS1Q07889 1333 aaPredicted RBP13.04□□□□□ -0.32
TTC17-201ENST00000039989 RIMBP2O15034 1052 aa13.04□□□□□ -0.32
TTC17-201ENST00000039989 HLFQ16534 295 aa13.04□□□□□ -0.32
TTC17-201ENST00000039989 KRT27Q7Z3Y8 459 aa13.04□□□□□ -0.32
TTC17-201ENST00000039989 ANKRD18AQ8IVF6 992 aa13.04□□□□□ -0.32
TTC17-201ENST00000039989 SH3TC1Q8TE82 1336 aa13.04□□□□□ -0.32
TTC17-201ENST00000039989 BABAM1Q9NWV8 329 aa13.04□□□□□ -0.32
TTC17-201ENST00000039989 AKAP2Q9Y2D5 859 aa13.04□□□□□ -0.32
TTC17-201ENST00000039989 CAVIN4Q5BKX8 364 aa13.03□□□□□ -0.32
TTC17-201ENST00000039989 MARCH10Q8NA82 808 aaPredicted RBP13.03□□□□□ -0.32
TTC17-201ENST00000039989 CDC5LQ99459 802 aaKnown RBP13.03□□□□□ -0.32
TTC17-201ENST00000039989 RXRBP28702 533 aa13.03□□□□□ -0.32
TTC17-201ENST00000039989 TDO2P48775 406 aa13.03□□□□□ -0.32
TTC17-201ENST00000039989 TCIRG1Q13488 830 aa13.03□□□□□ -0.32
TTC17-201ENST00000039989 SNAP23O00161 211 aa13.03□□□□□ -0.32
TTC17-201ENST00000039989 ZRSR1Q15695 479 aaKnown RBP13.03□□□□□ -0.32
TTC17-201ENST00000039989 AIDAQ96BJ3 306 aa13.03□□□□□ -0.32
TTC17-201ENST00000039989 TRIM34Q9BYJ4 488 aa13.03□□□□□ -0.32
TTC17-201ENST00000039989 PUS3Q9BZE2 481 aaKnown RBP13.03□□□□□ -0.32
TTC17-201ENST00000039989 ATP2B1P20020 1258 aa13.03□□□□□ -0.32
TTC17-201ENST00000039989 NCBP3Q53F19 620 aaKnown RBP13.03□□□□□ -0.32
TTC17-201ENST00000039989 SIRT2Q8IXJ6 389 aa13.03□□□□□ -0.32
TTC17-201ENST00000039989 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.03□□□□□ -0.328e-7■■■□□ 17.5
TTC17-201ENST00000039989 CASTP20810 708 aaKnown RBP13.02□□□□□ -0.32
TTC17-201ENST00000039989 LRRC24Q50LG9 513 aa13.02□□□□□ -0.32
TTC17-201ENST00000039989 CCDC82Q8N4S0 544 aa13.02□□□□□ -0.32
TTC17-201ENST00000039989 LRRC2Q9BYS8 371 aa13.02□□□□□ -0.32
TTC17-201ENST00000039989 SLC5A1P13866 664 aa13.02□□□□□ -0.33
TTC17-201ENST00000039989 ZSCAN29Q8IWY8 852 aaPredicted RBP13.02□□□□□ -0.33
TTC17-201ENST00000039989 C8orf34Q49A92 452 aa13.02□□□□□ -0.33
TTC17-201ENST00000039989 BMP2KLQ5H9B9 411 aa13.02□□□□□ -0.33
TTC17-201ENST00000039989 CNBD1Q8NA66 436 aa13.02□□□□□ -0.33
TTC17-201ENST00000039989 GJD4Q96KN9 370 aaPredicted RBP13.02□□□□□ -0.33
TTC17-201ENST00000039989 KIF24Q5T7B8 1368 aa13.02□□□□□ -0.33
TTC17-201ENST00000039989 CCDC191Q8NCU4 936 aa13.02□□□□□ -0.33
TTC17-201ENST00000039989 GBP4Q96PP9 640 aa13.02□□□□□ -0.33
TTC17-201ENST00000039989 SMC3Q9UQE7 1217 aa13.02□□□□□ -0.33
TTC17-201ENST00000039989 NBPF26B4DH59 902 aa13.01□□□□□ -0.33
TTC17-201ENST00000039989 NBPF14Q5TI25 921 aa13.01□□□□□ -0.33
TTC17-201ENST00000039989 NBPF10Q6P3W6 841 aaKnown RBP13.01□□□□□ -0.33
TTC17-201ENST00000039989 SYNE3Q6ZMZ3 975 aa13.01□□□□□ -0.33
TTC17-201ENST00000039989 NBPF15Q8N660 670 aa13.01□□□□□ -0.33
TTC17-201ENST00000039989 A0A1B0GUL7 405 aa13□□□□□ -0.33
TTC17-201ENST00000039989 HEG1Q9ULI3 1381 aa13□□□□□ -0.33
TTC17-201ENST00000039989 KDM2BQ8NHM5 1336 aa13□□□□□ -0.33
TTC17-201ENST00000039989 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13□□□□□ -0.33
TTC17-201ENST00000039989 AMOTL1Q8IY63 956 aa13□□□□□ -0.33
TTC17-201ENST00000039989 MIGA1Q8NAN2 632 aa13□□□□□ -0.33
TTC17-201ENST00000039989 MAP2P11137 1827 aaKnown RBP13□□□□□ -0.33
TTC17-201ENST00000039989 ST5P78524 1137 aa13□□□□□ -0.33
TTC17-201ENST00000039989 EPHA10Q5JZY3 1008 aa13□□□□□ -0.33
TTC17-201ENST00000039989 CCDC129Q6ZRS4 1044 aa13□□□□□ -0.33
TTC17-201ENST00000039989 PALLDQ8WX93 1383 aa13□□□□□ -0.33
TTC17-201ENST00000039989 CPA1P15085 419 aa13□□□□□ -0.33
TTC17-201ENST00000039989 IL15P40933 162 aaPredicted RBP13□□□□□ -0.33
TTC17-201ENST00000039989 CEBPZQ03701 1054 aaKnown RBP13□□□□□ -0.33
TTC17-201ENST00000039989 DDX11Q96FC9 970 aa13□□□□□ -0.33
TTC17-201ENST00000039989 GREM2Q9H772 168 aa13□□□□□ -0.33
TTC17-201ENST00000039989 SEC31BQ9NQW1 1179 aa13□□□□□ -0.33
TTC17-201ENST00000039989 NUP133Q8WUM0 1156 aa12.99□□□□□ -0.33
TTC17-201ENST00000039989 IGKV5-2P06315 115 aa12.99□□□□□ -0.33
TTC17-201ENST00000039989 VPS53Q5VIR6 699 aa12.99□□□□□ -0.33
TTC17-201ENST00000039989 DZIP1Q86YF9 867 aaKnown RBP12.99□□□□□ -0.33
TTC17-201ENST00000039989 JCADQ9P266 1359 aa12.99□□□□□ -0.33
TTC17-201ENST00000039989 MED14O60244 1454 aa12.98□□□□□ -0.33
TTC17-201ENST00000039989 BLOC1S2Q6QNY1 142 aa12.98□□□□□ -0.33
TTC17-201ENST00000039989 CYP46A1Q9Y6A2 500 aa12.98□□□□□ -0.33
TTC17-201ENST00000039989 EYA2O00167 538 aa12.98□□□□□ -0.33
TTC17-201ENST00000039989 AKAP17AQ02040 695 aaKnown RBP12.98□□□□□ -0.33
TTC17-201ENST00000039989 CHST3Q7LGC8 479 aa12.98□□□□□ -0.33
TTC17-201ENST00000039989 EAF2Q96CJ1 260 aaPredicted RBP12.98□□□□□ -0.33
TTC17-201ENST00000039989 TLR7Q9NYK1 1049 aaKnown RBP12.98□□□□□ -0.33
TTC17-201ENST00000039989 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.98□□□□□ -0.33
TTC17-201ENST00000039989 ERICH2A1L162 156 aa12.98□□□□□ -0.33
TTC17-201ENST00000039989 HIP1O00291 1037 aa12.98□□□□□ -0.33
TTC17-201ENST00000039989 SLC9C2Q5TAH2 1124 aa12.98□□□□□ -0.33
TTC17-201ENST00000039989 CRB1P82279 1406 aa12.98□□□□□ -0.33
TTC17-201ENST00000039989 SF3A1Q15459 793 aaKnown RBP12.97□□□□□ -0.33
TTC17-201ENST00000039989 EVI5LQ96CN4 794 aa12.97□□□□□ -0.33
TTC17-201ENST00000039989 PARP3Q9Y6F1 533 aa12.97□□□□□ -0.33
TTC17-201ENST00000039989 MAP3K15Q6ZN16 1313 aa12.97□□□□□ -0.33
TTC17-201ENST00000039989 NMIQ13287 307 aaPredicted RBP12.97□□□□□ -0.33
TTC17-201ENST00000039989 RABEP1Q15276 862 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms