RNA–Protein interactions for RNA: ENSMUST00000112523.7

Clstn3-202, Transcript of Calsyntenin-3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Clstn3, Length 3,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clstn3-202ENSMUST00000112523 Ppip5k2Q6ZQB6 1129 aa11.16□□□□□ -0.62
Clstn3-202ENSMUST00000112523 Pof1bQ8K4L4 587 aa11.16□□□□□ -0.62
Clstn3-202ENSMUST00000112523 Sumf1Q8R0F3 372 aa11.16□□□□□ -0.62
Clstn3-202ENSMUST00000112523 Mical1Q8VDP3 1048 aa11.16□□□□□ -0.62
Clstn3-202ENSMUST00000112523 Tnrc6bQ8BKI2 1810 aaKnown RBP11.16□□□□□ -0.62
Clstn3-202ENSMUST00000112523 Pla2g4fQ50L41 855 aa11.16□□□□□ -0.62
Clstn3-202ENSMUST00000112523 Susd4Q8BH32 490 aa11.16□□□□□ -0.62
Clstn3-202ENSMUST00000112523 Slx1bQ8BX32 270 aa11.16□□□□□ -0.62
Clstn3-202ENSMUST00000112523 Rbm17Q8JZX4 405 aaKnown RBP11.16□□□□□ -0.62
Clstn3-202ENSMUST00000112523 ParvgQ9ERD8 331 aa11.16□□□□□ -0.62
Clstn3-202ENSMUST00000112523 Plagl1Q9JLQ4 704 aa11.16□□□□□ -0.62
Clstn3-202ENSMUST00000112523 Foxo3Q9WVH4 672 aa11.16□□□□□ -0.62
Clstn3-202ENSMUST00000112523 Letm1Q9Z2I0 738 aa11.16□□□□□ -0.62
Clstn3-202ENSMUST00000112523 Top1mtQ8R4U6 593 aa11.15□□□□□ -0.62
Clstn3-202ENSMUST00000112523 Anapc15P60007 132 aa11.15□□□□□ -0.62
Clstn3-202ENSMUST00000112523 Cfap69Q8BH53 942 aa11.15□□□□□ -0.62
Clstn3-202ENSMUST00000112523 Ufl1Q8CCJ3 793 aaKnown RBP11.15□□□□□ -0.62
Clstn3-202ENSMUST00000112523 Sde2Q8K1J5 448 aaKnown RBP11.15□□□□□ -0.62
Clstn3-202ENSMUST00000112523 Pus3Q9JI38 481 aa11.15□□□□□ -0.62
Clstn3-202ENSMUST00000112523 Mapkapk5O54992 473 aa11.14□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Ppp1r21Q3TDD9 780 aa11.14□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Cdca7Q9D0M2 382 aa11.14□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Camta1A2A891 1682 aa11.14□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Fam135bQ9DAI6 1403 aa11.14□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Sult6b1P0CC03 303 aa11.14□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Fam83bQ0VBM2 1012 aa11.14□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Arid3aQ62431 601 aa11.14□□□□□ -0.63
Clstn3-202ENSMUST00000112523 PogkQ80TC5 607 aa11.14□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Tmc1Q8R4P5 757 aa11.14□□□□□ -0.63
Clstn3-202ENSMUST00000112523 VgfQ0VGU4 617 aa11.14□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Glg1Q61543 1175 aaKnown RBP11.14□□□□□ -0.63
Clstn3-202ENSMUST00000112523 B4galnt4Q766D5 1034 aa11.14□□□□□ -0.63
Clstn3-202ENSMUST00000112523 RestQ8VIG1 1082 aa11.14□□□□□ -0.63
Clstn3-202ENSMUST00000112523 RarsQ9D0I9 660 aaKnown RBP11.14□□□□□ -0.63
Clstn3-202ENSMUST00000112523 MypnQ5DTJ9 1315 aa11.14□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Kif20bQ80WE4 1774 aaKnown RBP11.14□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Kcnh4A2A5F7 1018 aa11.13□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Large2Q5XPT3 690 aa11.13□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Gpr182P43142 395 aa11.13□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Cct4P80315 539 aaKnown RBP11.13□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Mum1Q6DID5 682 aa11.13□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Adcy9P51830 1353 aa11.13□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Cdcp1Q5U462 833 aa11.13□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Tmem87bQ8BKU8 555 aa11.13□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Kcnq3Q8K3F6 873 aa11.13□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Ssfa2Q922B9 1252 aa11.13□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Naa16Q9DBB4 864 aa11.13□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Kcnn1Q9EQR3 537 aa11.13□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Plekho1Q9JIY0 408 aa11.13□□□□□ -0.63
Clstn3-202ENSMUST00000112523 IncenpQ9WU62 880 aa11.13□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Prl3d3A0A0M6L0J6 224 aa11.12□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Filip1lQ6P6L0 1131 aa11.12□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Ccp110Q7TSH4 1004 aa11.12□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Mxd3Q80US8 206 aa11.12□□□□□ -0.63
Clstn3-202ENSMUST00000112523 NalcnQ8BXR5 1738 aa11.12□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Rabep1O35551 862 aa11.12□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Pdia3P27773 505 aaKnown RBP11.12□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Tmem67Q8BR76 992 aa11.12□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Tmem119Q8R138 280 aa11.12□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Rai14Q9EP71 979 aaKnown RBP11.12□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Celf1P28659 486 aaKnown RBP11.11□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Ftl2P49945 183 aa11.11□□□□□ -0.63
Clstn3-202ENSMUST00000112523 TrhQ62361 256 aa11.11□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Sf3a1Q8K4Z5 791 aaKnown RBP11.11□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Polr3dQ91WD1 398 aa11.11□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Atp6v1aP50516 617 aaKnown RBP11.11□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Mcm2P97310 904 aa11.11□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Wwc1Q5SXA9 1104 aa11.11□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Mlh1Q9JK91 760 aa11.11□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Eya2O08575 532 aa11.11□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Lonrf3Q9D4H7 753 aa11.11□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Bin2D3Z6Q9 489 aa11.1□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Tm6sf1P58749 370 aa11.1□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Zbtb38Q3LR78 1197 aa11.1□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Pde3bQ61409 1100 aa11.1□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Sil1Q9EPK6 465 aa11.1□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Mad1l1Q9WTX8 717 aaKnown RBP11.1□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Arhgap33Q80YF9 1305 aa11.1□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Ripor2Q80U16 1078 aa11.1□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Irs4Q9Z0Y7 1216 aa11.1□□□□□ -0.63
Clstn3-202ENSMUST00000112523 LifrP42703 1092 aa11.1□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Kiaa0753Q6A000 959 aa11.1□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Znf18Q810A1 556 aa11.1□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Cct2P80314 535 aaKnown RBP11.09□□□□□ -0.63
Clstn3-202ENSMUST00000112523 DbnlQ62418 436 aa11.09□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Ccdc39Q9D5Y1 937 aa11.09□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Irgm2A0A140LIF8 407 aa11.09□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Abtb2Q7TQI7 1024 aa11.09□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Nup133Q8R0G9 1155 aa11.09□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Krt25Q8VCW2 446 aa11.09□□□□□ -0.63
Clstn3-202ENSMUST00000112523 St5Q924W7 1134 aa11.09□□□□□ -0.63
Clstn3-202ENSMUST00000112523 TnksQ6PFX9 1320 aa11.09□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Igsf1Q7TQA1 1317 aa11.09□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Ltbp4Q8K4G1 1666 aa11.09□□□□□ -0.63
Clstn3-202ENSMUST00000112523 TbcaP48428 108 aaKnown RBP11.09□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Clca2Q8BG22 942 aa11.09□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Ncbp3Q8BZR9 615 aaKnown RBP11.09□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Aldh1l2Q8K009 923 aa11.09□□□□□ -0.63
Clstn3-202ENSMUST00000112523 CpzQ8R4V4 654 aa11.09□□□□□ -0.63
Clstn3-202ENSMUST00000112523 Phlpp2Q8BXA7 1320 aa11.08□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 22.3 ms