RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Wisp1O54775 367 aa11.19□□□□□ -0.62
Ccdc54-201ENSMUST00000062439 Pnpla5Q32LZ8 432 aa11.19□□□□□ -0.62
Ccdc54-201ENSMUST00000062439 GpamQ61586 827 aa11.19□□□□□ -0.62
Ccdc54-201ENSMUST00000062439 Clca4aQ6Q473 924 aa11.19□□□□□ -0.62
Ccdc54-201ENSMUST00000062439 Lmntd1Q9D4C1 413 aa11.19□□□□□ -0.62
Ccdc54-201ENSMUST00000062439 Cttnbp2B9EJA2 1648 aa11.19□□□□□ -0.62
Ccdc54-201ENSMUST00000062439 Gm11555B1AQ89 175 aa11.18□□□□□ -0.62
Ccdc54-201ENSMUST00000062439 SarsP26638 512 aaKnown RBP11.18□□□□□ -0.62
Ccdc54-201ENSMUST00000062439 Tmprss9P69525 1065 aa11.18□□□□□ -0.62
Ccdc54-201ENSMUST00000062439 NfiaQ02780 532 aa11.18□□□□□ -0.62
Ccdc54-201ENSMUST00000062439 Ppm1mQ8BU27 406 aa11.18□□□□□ -0.62
Ccdc54-201ENSMUST00000062439 ClasrpQ8CFC7 668 aa11.18□□□□□ -0.62
Ccdc54-201ENSMUST00000062439 Baz1bQ9Z277 1479 aa11.18□□□□□ -0.62
Ccdc54-201ENSMUST00000062439 Fyb1O35601 819 aa11.17□□□□□ -0.62
Ccdc54-201ENSMUST00000062439 Mboat4P0C7A3 435 aa11.17□□□□□ -0.62
Ccdc54-201ENSMUST00000062439 CtskP55097 329 aa11.17□□□□□ -0.62
Ccdc54-201ENSMUST00000062439 Ltbp3Q61810 1268 aa11.17□□□□□ -0.62
Ccdc54-201ENSMUST00000062439 Cep68Q8C0D9 733 aa11.17□□□□□ -0.62
Ccdc54-201ENSMUST00000062439 Champ1Q8K327 802 aaKnown RBP11.17□□□□□ -0.62
Ccdc54-201ENSMUST00000062439 Kcnmb2Q9CZM9 235 aa11.17□□□□□ -0.62
Ccdc54-201ENSMUST00000062439 Cyp2c69E9PXC3 491 aa11.16□□□□□ -0.62
Ccdc54-201ENSMUST00000062439 Cep131Q62036 1060 aa11.16□□□□□ -0.62
Ccdc54-201ENSMUST00000062439 Prickle2Q80Y24 845 aa11.16□□□□□ -0.62
Ccdc54-201ENSMUST00000062439 Prr13Q9CQJ5 137 aa11.16□□□□□ -0.62
Ccdc54-201ENSMUST00000062439 RaraP11416 462 aa11.15□□□□□ -0.62
Ccdc54-201ENSMUST00000062439 Csf2rbP26955 896 aa11.15□□□□□ -0.62
Ccdc54-201ENSMUST00000062439 Irs1P35569 1233 aa11.15□□□□□ -0.62
Ccdc54-201ENSMUST00000062439 Gabpb2P81069 414 aa11.15□□□□□ -0.62
Ccdc54-201ENSMUST00000062439 Slc13a5Q67BT3 572 aa11.15□□□□□ -0.62
Ccdc54-201ENSMUST00000062439 LmlnQ8BMN4 681 aa11.15□□□□□ -0.62
Ccdc54-201ENSMUST00000062439 Phldb1Q6PDH0 1371 aaKnown RBP11.15□□□□□ -0.63
Ccdc54-201ENSMUST00000062439 Q3UJC8 639 aa11.14□□□□□ -0.63
Ccdc54-201ENSMUST00000062439 SpdyaQ5IBH7 310 aa11.14□□□□□ -0.63
Ccdc54-201ENSMUST00000062439 Kdm4aQ8BW72 1064 aa11.14□□□□□ -0.63
Ccdc54-201ENSMUST00000062439 Dctn4Q8CBY8 467 aa11.14□□□□□ -0.63
Ccdc54-201ENSMUST00000062439 Angel2Q8K1C0 544 aa11.14□□□□□ -0.63
Ccdc54-201ENSMUST00000062439 Psmd2Q8VDM4 908 aa11.14□□□□□ -0.63
Ccdc54-201ENSMUST00000062439 S1pr4Q9Z0L1 386 aa11.14□□□□□ -0.63
Ccdc54-201ENSMUST00000062439 Rnf169E9Q7F2 694 aa11.13□□□□□ -0.63
Ccdc54-201ENSMUST00000062439 Tbx3P70324 741 aa11.13□□□□□ -0.63
Ccdc54-201ENSMUST00000062439 Larp7Q05CL8 570 aaKnown RBP11.13□□□□□ -0.63
Ccdc54-201ENSMUST00000062439 Carns1Q6ZPS2 827 aa11.13□□□□□ -0.63
Ccdc54-201ENSMUST00000062439 Adam39Q7M762 756 aa11.13□□□□□ -0.63
Ccdc54-201ENSMUST00000062439 Dmrtc1c1Q9D410 238 aa11.13□□□□□ -0.63
Ccdc54-201ENSMUST00000062439 Synj1Q8CHC4 1574 aa11.12□□□□□ -0.63
Ccdc54-201ENSMUST00000062439 Epn3Q91W69 636 aa11.12□□□□□ -0.63
Ccdc54-201ENSMUST00000062439 Gsdmdc1Q9D8T2 487 aa11.12□□□□□ -0.63
Ccdc54-201ENSMUST00000062439 CftrP26361 1476 aa11.12□□□□□ -0.63
Ccdc54-201ENSMUST00000062439 Arid4aF8VPQ2 1261 aaKnown RBP11.11□□□□□ -0.63
Ccdc54-201ENSMUST00000062439 Hap1O35668 628 aa11.11□□□□□ -0.63
Ccdc54-201ENSMUST00000062439 Antxr2Q6DFX2 487 aa11.11□□□□□ -0.63
Ccdc54-201ENSMUST00000062439 EngaseQ8BX80 734 aa11.11□□□□□ -0.63
Ccdc54-201ENSMUST00000062439 Dcp1aQ91YD3 602 aa11.11□□□□□ -0.63
Ccdc54-201ENSMUST00000062439 Dnajb8Q9QYI7 227 aa11.11□□□□□ -0.63
Ccdc54-201ENSMUST00000062439 Kdf1A2A9F4 397 aa11.1□□□□□ -0.63
Ccdc54-201ENSMUST00000062439 Parp2O88554 559 aa11.1□□□□□ -0.63
Ccdc54-201ENSMUST00000062439 Slc7a13Q91WN3 478 aa11.1□□□□□ -0.63
Ccdc54-201ENSMUST00000062439 Gtf3c6Q9D8P7 227 aa11.1□□□□□ -0.63
Ccdc54-201ENSMUST00000062439 Brd4Q9ESU6 1400 aaKnown RBP11.09□□□□□ -0.63
Ccdc54-201ENSMUST00000062439 Gp6P0C191 313 aa11.09□□□□□ -0.63
Ccdc54-201ENSMUST00000062439 Abhd15Q5F2F2 459 aa11.09□□□□□ -0.63
Ccdc54-201ENSMUST00000062439 Ccdc154Q6RUT8 657 aa11.09□□□□□ -0.63
Ccdc54-201ENSMUST00000062439 Ak5Q920P5 562 aa11.09□□□□□ -0.63
Ccdc54-201ENSMUST00000062439 Tial1P70318 392 aaKnown RBP11.08□□□□□ -0.64
Ccdc54-201ENSMUST00000062439 HelbQ6NVF4 1074 aa11.08□□□□□ -0.64
Ccdc54-201ENSMUST00000062439 IqceQ6PCQ0 778 aa11.08□□□□□ -0.64
Ccdc54-201ENSMUST00000062439 Ankrd1Q9CR42 319 aa11.08□□□□□ -0.64
Ccdc54-201ENSMUST00000062439 Zfp994J3QM38 661 aa11.07□□□□□ -0.64
Ccdc54-201ENSMUST00000062439 Rbm27Q5SFM8 1060 aaKnown RBP11.07□□□□□ -0.64
Ccdc54-201ENSMUST00000062439 RbsnQ80Y56 783 aa11.07□□□□□ -0.64
Ccdc54-201ENSMUST00000062439 Atg14Q8CDJ3 492 aa11.07□□□□□ -0.64
Ccdc54-201ENSMUST00000062439 Wipi1Q8R3E3 446 aa11.07□□□□□ -0.64
Ccdc54-201ENSMUST00000062439 Ube2fQ9CY34 185 aa11.07□□□□□ -0.64
Ccdc54-201ENSMUST00000062439 Fam83dQ9D7I8 585 aa11.07□□□□□ -0.64
Ccdc54-201ENSMUST00000062439 Gfra3O35118 397 aa11.06□□□□□ -0.64
Ccdc54-201ENSMUST00000062439 Thbs1P35441 1170 aa11.06□□□□□ -0.64
Ccdc54-201ENSMUST00000062439 Kcnt1Q6ZPR4 1224 aa11.06□□□□□ -0.64
Ccdc54-201ENSMUST00000062439 Spns2Q91VM4 549 aa11.06□□□□□ -0.64
Ccdc54-201ENSMUST00000062439 Cd209dQ91ZW8 237 aa11.06□□□□□ -0.64
Ccdc54-201ENSMUST00000062439 Clstn1Q9EPL2 979 aa11.06□□□□□ -0.64
Ccdc54-201ENSMUST00000062439 Mrvi1Q9WUX5 899 aaKnown RBP11.06□□□□□ -0.64
Ccdc54-201ENSMUST00000062439 Slfn4Q3UV66 602 aa11.05□□□□□ -0.64
Ccdc54-201ENSMUST00000062439 Hs3st6Q5GFD5 342 aa11.05□□□□□ -0.64
Ccdc54-201ENSMUST00000062439 Cdan1Q8CC12 1239 aa11.05□□□□□ -0.64
Ccdc54-201ENSMUST00000062439 McamQ8R2Y2 648 aaKnown RBP11.05□□□□□ -0.64
Ccdc54-201ENSMUST00000062439 Zcchc8Q9CYA6 709 aaKnown RBP11.05□□□□□ -0.64
Ccdc54-201ENSMUST00000062439 Rfc5Q9D0F6 339 aa11.05□□□□□ -0.64
Ccdc54-201ENSMUST00000062439 Fam217aQ9D9W6 419 aa11.05□□□□□ -0.64
Ccdc54-201ENSMUST00000062439 1700018B08RikQ9DA83 213 aa11.05□□□□□ -0.64
Ccdc54-201ENSMUST00000062439 Bmp4P21275 408 aa11.04□□□□□ -0.64
Ccdc54-201ENSMUST00000062439 Ptpn12P35831 775 aa11.04□□□□□ -0.64
Ccdc54-201ENSMUST00000062439 Zcchc2Q69ZB8 1166 aa11.04□□□□□ -0.64
Ccdc54-201ENSMUST00000062439 NracQ8BNX7 165 aa11.04□□□□□ -0.64
Ccdc54-201ENSMUST00000062439 Card11Q8CIS0 1159 aa11.04□□□□□ -0.64
Ccdc54-201ENSMUST00000062439 QpctQ9CYK2 362 aa11.04□□□□□ -0.64
Ccdc54-201ENSMUST00000062439 Gipc1Q9Z0G0 333 aa11.04□□□□□ -0.64
Ccdc54-201ENSMUST00000062439 Aoc3O70423 765 aa11.03□□□□□ -0.64
Ccdc54-201ENSMUST00000062439 Cd19P25918 547 aa11.03□□□□□ -0.64
Ccdc54-201ENSMUST00000062439 Paxip1Q6NZQ4 1056 aa11.03□□□□□ -0.64
Ccdc54-201ENSMUST00000062439 Adam20Q7M763 760 aa11.03□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 25.4 ms