RNA–Protein interactions for RNA: ENSMUST00000040783.10

Usp40-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp40, Length 5,049 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-201ENSMUST00000040783 Smc5Q8CG46 1101 aaKnown RBP8.69□□□□□ -1.02
Usp40-201ENSMUST00000040783 Trim11Q99PQ2 467 aa8.69□□□□□ -1.02
Usp40-201ENSMUST00000040783 IncenpQ9WU62 880 aa8.69□□□□□ -1.02
Usp40-201ENSMUST00000040783 Psrc1Q9D0P7 329 aa8.69□□□□□ -1.02
Usp40-201ENSMUST00000040783 Sbno1Q689Z5 1390 aa8.69□□□□□ -1.02
Usp40-201ENSMUST00000040783 Atp8b2P98199 1209 aa8.69□□□□□ -1.02
Usp40-201ENSMUST00000040783 Clcn1Q64347 994 aa8.69□□□□□ -1.02
Usp40-201ENSMUST00000040783 ZwintQ9CQU5 252 aa8.69□□□□□ -1.02
Usp40-201ENSMUST00000040783 Luc7lQ9CYI4 371 aaKnown RBP8.69□□□□□ -1.02
Usp40-201ENSMUST00000040783 MthfsQ9D110 203 aa8.69□□□□□ -1.02
Usp40-201ENSMUST00000040783 Hmg20bQ9Z104 317 aa8.69□□□□□ -1.02
Usp40-201ENSMUST00000040783 Ak9G3UYQ4 1894 aa8.69□□□□□ -1.02
Usp40-201ENSMUST00000040783 Palm3A2TJV2 734 aa8.69□□□□□ -1.02
Usp40-201ENSMUST00000040783 Prim1P20664 417 aa8.69□□□□□ -1.02
Usp40-201ENSMUST00000040783 Rad23bP54728 416 aa8.69□□□□□ -1.02
Usp40-201ENSMUST00000040783 Miga2Q8BK03 593 aa8.69□□□□□ -1.02
Usp40-201ENSMUST00000040783 Cfap45Q9D9U9 551 aa8.69□□□□□ -1.02
Usp40-201ENSMUST00000040783 Cep170Q6A065 1588 aa8.68□□□□□ -1.02
Usp40-201ENSMUST00000040783 Kif24Q6NWW5 1356 aa8.68□□□□□ -1.02
Usp40-201ENSMUST00000040783 Rbbp8nlA2ABX0 614 aa8.68□□□□□ -1.02
Usp40-201ENSMUST00000040783 Slc1a4O35874 532 aa8.68□□□□□ -1.02
Usp40-201ENSMUST00000040783 Snrpa1P57784 255 aaKnown RBP8.68□□□□□ -1.02
Usp40-201ENSMUST00000040783 IntuQ059U7 942 aa8.68□□□□□ -1.02
Usp40-201ENSMUST00000040783 Samm50Q8BGH2 469 aa8.68□□□□□ -1.02
Usp40-201ENSMUST00000040783 Rbm17Q8JZX4 405 aaKnown RBP8.68□□□□□ -1.02
Usp40-201ENSMUST00000040783 Msl1Q6PDM1 616 aa8.68□□□□□ -1.02
Usp40-201ENSMUST00000040783 Adck5Q80V03 582 aa8.68□□□□□ -1.02
Usp40-201ENSMUST00000040783 Nup88Q8CEC0 753 aaKnown RBP8.68□□□□□ -1.02
Usp40-201ENSMUST00000040783 Atf7Q8R0S1 413 aa8.68□□□□□ -1.02
Usp40-201ENSMUST00000040783 Bicc1Q99MQ1 977 aaKnown RBP8.68□□□□□ -1.02
Usp40-201ENSMUST00000040783 Foxo3Q9WVH4 672 aa8.68□□□□□ -1.02
Usp40-201ENSMUST00000040783 SphkapQ6NSW3 1687 aa8.68□□□□□ -1.02
Usp40-201ENSMUST00000040783 Lekr1B2RVN1 116 aa8.68□□□□□ -1.02
Usp40-201ENSMUST00000040783 Mctp1E9PV86 951 aa8.68□□□□□ -1.02
Usp40-201ENSMUST00000040783 Stx8O88983 236 aa8.68□□□□□ -1.02
Usp40-201ENSMUST00000040783 Limch1Q3UH68 1057 aa8.68□□□□□ -1.02
Usp40-201ENSMUST00000040783 Sik1Q60670 779 aa8.68□□□□□ -1.02
Usp40-201ENSMUST00000040783 SympkQ80X82 1284 aa8.68□□□□□ -1.02
Usp40-201ENSMUST00000040783 Rdm1Q9CQK3 281 aa8.68□□□□□ -1.02
Usp40-201ENSMUST00000040783 Ppfia1B2RXQ2 1266 aa8.68□□□□□ -1.02
Usp40-201ENSMUST00000040783 Gm12185Q5NCB2 835 aa8.68□□□□□ -1.02
Usp40-201ENSMUST00000040783 Prkab2Q6PAM0 271 aa8.68□□□□□ -1.02
Usp40-201ENSMUST00000040783 HomezQ80W88 542 aa8.68□□□□□ -1.02
Usp40-201ENSMUST00000040783 Gigyf1Q99MR1 1044 aaKnown RBP8.68□□□□□ -1.02
Usp40-201ENSMUST00000040783 Med4Q9CQA5 270 aa8.68□□□□□ -1.02
Usp40-201ENSMUST00000040783 Ccdc83Q9D4V3 305 aa8.68□□□□□ -1.02
Usp40-201ENSMUST00000040783 Ccdc85cE9Q6B2 420 aa8.67□□□□□ -1.02
Usp40-201ENSMUST00000040783 Ddx19aQ61655 478 aaKnown RBP8.67□□□□□ -1.02
Usp40-201ENSMUST00000040783 Zbtb12Q9Z150 459 aa8.67□□□□□ -1.02
Usp40-201ENSMUST00000040783 Kdm5cP41230 1554 aa8.67□□□□□ -1.02
Usp40-201ENSMUST00000040783 Map3k4O08648 1597 aa8.67□□□□□ -1.02
Usp40-201ENSMUST00000040783 Vamp4O70480 141 aa8.67□□□□□ -1.02
Usp40-201ENSMUST00000040783 Cops6O88545 324 aa8.67□□□□□ -1.02
Usp40-201ENSMUST00000040783 DlatQ8BMF4 642 aa8.67□□□□□ -1.02
Usp40-201ENSMUST00000040783 A0A0U1RNP2 1173 aa8.67□□□□□ -1.02
Usp40-201ENSMUST00000040783 Prdm11A2AGX3 565 aa8.67□□□□□ -1.02
Usp40-201ENSMUST00000040783 NcapgE9PWG6 1004 aa8.67□□□□□ -1.02
Usp40-201ENSMUST00000040783 Api5O35841 504 aaKnown RBP8.67□□□□□ -1.02
Usp40-201ENSMUST00000040783 Usp5P56399 858 aaKnown RBP8.67□□□□□ -1.02
Usp40-201ENSMUST00000040783 Ddx17Q501J6 650 aaKnown RBP8.67□□□□□ -1.02
Usp40-201ENSMUST00000040783 Bag4Q8CI61 457 aa8.67□□□□□ -1.02
Usp40-201ENSMUST00000040783 Naa16Q9DBB4 864 aa8.67□□□□□ -1.02
Usp40-201ENSMUST00000040783 Depdc5P61460 1591 aa8.67□□□□□ -1.02
Usp40-201ENSMUST00000040783 Plekhg2Q6KAU7 1340 aa8.67□□□□□ -1.02
Usp40-201ENSMUST00000040783 Hand2Q61039 217 aa8.66□□□□□ -1.02
Usp40-201ENSMUST00000040783 Zcrb1Q9CZ96 217 aaKnown RBP8.66□□□□□ -1.02
Usp40-201ENSMUST00000040783 SarnpQ9D1J3 210 aaKnown RBP8.66□□□□□ -1.02
Usp40-201ENSMUST00000040783 Ccdc94Q9D6J3 314 aa8.66□□□□□ -1.02
Usp40-201ENSMUST00000040783 Usp35M0QWN7 1009 aa8.66□□□□□ -1.02
Usp40-201ENSMUST00000040783 Slc4a4O88343 1079 aa8.66□□□□□ -1.02
Usp40-201ENSMUST00000040783 Suds3Q8BR65 328 aa8.66□□□□□ -1.02
Usp40-201ENSMUST00000040783 Kif3cO35066 796 aa8.66□□□□□ -1.02
Usp40-201ENSMUST00000040783 Cnnm2Q3TWN3 875 aa8.66□□□□□ -1.02
Usp40-201ENSMUST00000040783 Dennd3A2RT67 1274 aa8.66□□□□□ -1.02
Usp40-201ENSMUST00000040783 Mcm4P49717 862 aa8.66□□□□□ -1.02
Usp40-201ENSMUST00000040783 Tbc1d2bQ3U0J8 965 aa8.66□□□□□ -1.02
Usp40-201ENSMUST00000040783 Ano8Q6PB70 1060 aa8.66□□□□□ -1.02
Usp40-201ENSMUST00000040783 Lrrfip2Q91WK0 415 aa8.66□□□□□ -1.02
Usp40-201ENSMUST00000040783 Wdr63B2RY71 923 aa8.65□□□□□ -1.02
Usp40-201ENSMUST00000040783 Ufl1Q8CCJ3 793 aaKnown RBP8.65□□□□□ -1.02
Usp40-201ENSMUST00000040783 Ccdc158Q8CDI6 1109 aa8.65□□□□□ -1.02
Usp40-201ENSMUST00000040783 Fam208aQ69ZR9 1610 aaKnown RBP8.65□□□□□ -1.02
Usp40-201ENSMUST00000040783 Ttll12Q3UDE2 639 aa8.65□□□□□ -1.02
Usp40-201ENSMUST00000040783 Gas2l3Q3UWW6 683 aa8.65□□□□□ -1.02
Usp40-201ENSMUST00000040783 Larp1Q6ZQ58 1072 aaKnown RBP8.65□□□□□ -1.02
Usp40-201ENSMUST00000040783 Brms1Q99N20 246 aa8.65□□□□□ -1.02
Usp40-201ENSMUST00000040783 Mcmdc2E9Q956 681 aa8.65□□□□□ -1.02
Usp40-201ENSMUST00000040783 Metap2O08663 478 aaKnown RBP8.65□□□□□ -1.02
Usp40-201ENSMUST00000040783 Casp1P29452 402 aa8.65□□□□□ -1.02
Usp40-201ENSMUST00000040783 Cct2P80314 535 aaKnown RBP8.65□□□□□ -1.02
Usp40-201ENSMUST00000040783 Morc2aQ69ZX6 1030 aa8.65□□□□□ -1.02
Usp40-201ENSMUST00000040783 Nop14Q8R3N1 860 aaKnown RBP8.65□□□□□ -1.02
Usp40-201ENSMUST00000040783 Antxr1Q9CZ52 562 aa8.65□□□□□ -1.02
Usp40-201ENSMUST00000040783 Pdzd9Q9D9M4 266 aa8.65□□□□□ -1.02
Usp40-201ENSMUST00000040783 Irs4Q9Z0Y7 1216 aa8.65□□□□□ -1.02
Usp40-201ENSMUST00000040783 Cdk13Q69ZA1 1511 aaKnown RBP8.65□□□□□ -1.02
Usp40-201ENSMUST00000040783 Pus7B7ZNL8 666 aaKnown RBP8.65□□□□□ -1.03
Usp40-201ENSMUST00000040783 Abcd1P48410 736 aa8.65□□□□□ -1.03
Usp40-201ENSMUST00000040783 Gnat2P50149 354 aa8.65□□□□□ -1.03
Usp40-201ENSMUST00000040783 LyarQ08288 388 aaKnown RBP8.65□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 18.5 ms