RNA–Protein interactions for RNA: ENSMUST00000038665.5

Ptchd1-201, Transcript of Patched domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptchd1, Length 2,768 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd1-201ENSMUST00000038665 ZgpatQ8VDM1 511 aa10.22□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Mrpl50Q8VDT9 159 aaKnown RBP10.22□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Cwc25Q9DBF7 416 aa10.22□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Sytl4Q9R0Q1 673 aa10.22□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Shank2Q80Z38 1476 aa10.22□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Elmsan1E9Q2I4 1089 aaKnown RBP10.21□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Gadd45bP22339 160 aa10.21□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Ccdc129Q14B48 1034 aa10.21□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Gnat3Q3V3I2 354 aa10.21□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Ifit2Q64112 472 aa10.21□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Atg9aQ68FE2 551 aa10.21□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Rufy3Q9D394 469 aa10.21□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 LlphQ9D945 130 aaKnown RBP10.21□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Hdac6Q9Z2V5 1149 aa10.21□□□□□ -0.77
Ptchd1-201ENSMUST00000038665 Rbm8a2A0A0N4SUH6 174 aa10.21□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Sult6b1P0CC03 303 aa10.21□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Sik1Q60670 779 aa10.21□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Dcaf5Q80T85 946 aa10.21□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Kcnq3Q8K3F6 873 aa10.21□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Rbm8aQ9CWZ3 174 aa10.21□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Rbm33Q9CXK9 1231 aaKnown RBP10.21□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Rbbp8nlA2ABX0 614 aa10.2□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Ppfia1B2RXQ2 1266 aa10.2□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 MccE9PWI3 1003 aa10.2□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Lmbrd2Q8C561 694 aa10.2□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Lrrc59Q922Q8 307 aaKnown RBP10.2□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Ybx3Q9JKB3 361 aaKnown RBP10.2□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Ak2Q9WTP6 239 aa10.2□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Cyp2d10P24456 504 aa10.2□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Babam1Q3UI43 333 aa10.2□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Zkscan1Q8BGS3 561 aaKnown RBP10.2□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Tsr2Q8C8T8 191 aa10.2□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Ubap1lG3UW59 384 aa10.2□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Rab3gap1Q80UJ7 981 aa10.2□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Polr3dQ91WD1 398 aa10.2□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Shank3Q4ACU6 1730 aa10.19□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Zfp804bA0A0G2JGH6 1343 aa10.19□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 EappQ5BU09 281 aa10.19□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Ggt6Q6PDE7 497 aa10.19□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Tti2Q8BGV4 512 aa10.19□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Miga2Q8BK03 593 aa10.19□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Golim4Q8BXA1 655 aa10.19□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 IncenpQ9WU62 880 aa10.19□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Sos2Q02384 1333 aa10.19□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Stard3nlQ9DCI3 235 aa10.19□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Cyp19a1P28649 503 aa10.18□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Naa30Q8CES0 364 aa10.18□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Noc3lQ8VI84 807 aaKnown RBP10.18□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Add2Q9QYB8 725 aa10.18□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Rnf123Q5XPI3 1314 aa10.18□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Utp18Q5SSI6 552 aaKnown RBP10.18□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Filip1lQ6P6L0 1131 aa10.18□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Clca2Q8BG22 942 aa10.18□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Tmem87bQ8BKU8 555 aa10.18□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Sgsm1Q8BPQ7 1093 aa10.17□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Q8BT18 775 aa10.17□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 DpydQ8CHR6 1025 aa10.17□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Popdc2Q9ES82 367 aa10.17□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Mast2Q60592 1734 aa10.17□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Prl3d3A0A0M6L0J6 224 aa10.17□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 MecomP14404 1042 aa10.17□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Exoc5Q3TPX4 708 aa10.17□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 AnlnQ8K298 1121 aaKnown RBP10.17□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Fam213aQ9CYH2 218 aa10.17□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Ccne2Q9Z238 404 aa10.17□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Golgb1E9PVZ8 3238 aa10.17□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Kcnh4A2A5F7 1018 aa10.16□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 SlkO54988 1233 aa10.16□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Slc4a1P04919 929 aa10.16□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 FosbP13346 338 aa10.16□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 VeztQ3ZK22 780 aa10.16□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Tmc2Q8R4P4 888 aa10.16□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Sept12Q9D451 317 aa10.16□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Gm9992B2RWK3 458 aa10.16□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Unc93aQ710D3 458 aa10.16□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Sp8Q8BMJ8 486 aa10.16□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Ptcd1Q8C2E4 695 aaKnown RBP10.16□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Rbm17Q8JZX4 405 aaKnown RBP10.16□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Gigyf1Q99MR1 1044 aaKnown RBP10.16□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Nav1Q8CH77 1875 aa10.16□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Ssc5dQ8BV57 1371 aa10.16□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Bicdl1A0JNT9 577 aa10.15□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Anapc15P60007 132 aa10.15□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Ddx11Q6AXC6 880 aa10.15□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Bms1Q6PGF5 1284 aaKnown RBP10.15□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Gm45015A0A140LII9 184 aa10.15□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Gm18336A0A140LIU8 765 aa10.15□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Eya2O08575 532 aa10.15□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Ubxn10Q8BG34 277 aa10.15□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Lrrfip2Q91WK0 415 aa10.15□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 StrbpQ91WM1 672 aaKnown RBP10.15□□□□□ -0.78
Ptchd1-201ENSMUST00000038665 Dctn1O08788 1281 aa10.14□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Gpr182P43142 395 aa10.14□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Morc2aQ69ZX6 1030 aa10.14□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Kank4Q6P9J5 1016 aa10.14□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Trim56Q80VI1 734 aaKnown RBP10.14□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Ankrd23Q812A3 306 aa10.14□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Rassf8Q8CJ96 419 aa10.14□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Dnttip2Q8R2M2 758 aaKnown RBP10.14□□□□□ -0.79
Ptchd1-201ENSMUST00000038665 Mrc1Q61830 1456 aa10.14□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 29.4 ms