RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Atp2b3Q0VF55 1220 aa19.26■□□□□ 0.67
Trim28-201ENSMUST00000005705 CoilQ5SU73 570 aa19.26■□□□□ 0.67
Trim28-201ENSMUST00000005705 Ano8Q6PB70 1060 aa19.26■□□□□ 0.67
Trim28-201ENSMUST00000005705 Dixdc1Q80Y83 711 aa19.26■□□□□ 0.67
Trim28-201ENSMUST00000005705 Ccdc94Q9D6J3 314 aa19.26■□□□□ 0.67
Trim28-201ENSMUST00000005705 Pes1Q9EQ61 584 aaKnown RBP19.26■□□□□ 0.67
Trim28-201ENSMUST00000005705 PtprvP70289 1705 aa19.25■□□□□ 0.67
Trim28-201ENSMUST00000005705 Mon2Q80TL7 1715 aa19.25■□□□□ 0.67
Trim28-201ENSMUST00000005705 Ddx19aQ61655 478 aaKnown RBP19.25■□□□□ 0.67
Trim28-201ENSMUST00000005705 Rrs1Q9CYH6 365 aaKnown RBP19.25■□□□□ 0.67
Trim28-201ENSMUST00000005705 C3P01027 1663 aa19.25■□□□□ 0.67
Trim28-201ENSMUST00000005705 Wdr93Q402B2 695 aa19.25■□□□□ 0.67
Trim28-201ENSMUST00000005705 SympkQ80X82 1284 aa19.25■□□□□ 0.67
Trim28-201ENSMUST00000005705 Nup88Q8CEC0 753 aaKnown RBP19.25■□□□□ 0.67
Trim28-201ENSMUST00000005705 Gimap6Q8K349 305 aa19.25■□□□□ 0.67
Trim28-201ENSMUST00000005705 Bicd2Q921C5 820 aa19.25■□□□□ 0.67
Trim28-201ENSMUST00000005705 Ak2Q9WTP6 239 aa19.25■□□□□ 0.67
Trim28-201ENSMUST00000005705 Fam184aE9PW83 1143 aa19.25■□□□□ 0.67
Trim28-201ENSMUST00000005705 U2af2P26369 475 aaKnown RBP19.25■□□□□ 0.67
Trim28-201ENSMUST00000005705 Pnpla7A2AJ88 1352 aa19.24■□□□□ 0.67
Trim28-201ENSMUST00000005705 Fam228bQ497Q6 232 aa19.24■□□□□ 0.67
Trim28-201ENSMUST00000005705 Acsbg1Q99PU5 721 aa19.24■□□□□ 0.67
Trim28-201ENSMUST00000005705 Ms4a2P20490 235 aa19.24■□□□□ 0.67
Trim28-201ENSMUST00000005705 Timm10P62073 90 aa19.24■□□□□ 0.67
Trim28-201ENSMUST00000005705 Chmp7Q8R1T1 451 aa19.24■□□□□ 0.67
Trim28-201ENSMUST00000005705 Dnajc14Q921R4 703 aa19.24■□□□□ 0.67
Trim28-201ENSMUST00000005705 Mrps25Q9D125 171 aaKnown RBP19.24■□□□□ 0.67
Trim28-201ENSMUST00000005705 Rad50P70388 1312 aa19.23■□□□□ 0.67
Trim28-201ENSMUST00000005705 Stk36Q69ZM6 1316 aa19.23■□□□□ 0.67
Trim28-201ENSMUST00000005705 Hnrnpul1Q8VDM6 859 aaKnown RBP19.23■□□□□ 0.67
Trim28-201ENSMUST00000005705 Med4Q9CQA5 270 aa19.23■□□□□ 0.67
Trim28-201ENSMUST00000005705 Echdc1Q9D9V3 322 aa19.23■□□□□ 0.67
Trim28-201ENSMUST00000005705 Scn7aB1AYL1 1681 aa19.23■□□□□ 0.67
Trim28-201ENSMUST00000005705 Ppfia1B2RXQ2 1266 aa19.23■□□□□ 0.67
Trim28-201ENSMUST00000005705 Usp25P57080 1055 aa19.23■□□□□ 0.67
Trim28-201ENSMUST00000005705 Hand2Q61039 217 aa19.23■□□□□ 0.67
Trim28-201ENSMUST00000005705 Kcnf1Q7TSH7 493 aa19.23■□□□□ 0.67
Trim28-201ENSMUST00000005705 Pip4k2bQ80XI4 416 aa19.23■□□□□ 0.67
Trim28-201ENSMUST00000005705 Dzip1Q8BMD2 852 aa19.23■□□□□ 0.67
Trim28-201ENSMUST00000005705 Ptcd1Q8C2E4 695 aaKnown RBP19.23■□□□□ 0.67
Trim28-201ENSMUST00000005705 Nrbp1Q99J45 535 aa19.23■□□□□ 0.67
Trim28-201ENSMUST00000005705 Irf9Q61179 399 aa19.23■□□□□ 0.67
Trim28-201ENSMUST00000005705 Gm21698A0A087WQP8 267 aa19.22■□□□□ 0.67
Trim28-201ENSMUST00000005705 Gm21671G3UY31 267 aa19.22■□□□□ 0.67
Trim28-201ENSMUST00000005705 Ddx11Q6AXC6 880 aa19.22■□□□□ 0.67
Trim28-201ENSMUST00000005705 Ano6Q6P9J9 911 aa19.22■□□□□ 0.67
Trim28-201ENSMUST00000005705 Nap1l3Q794H2 544 aa19.22■□□□□ 0.67
Trim28-201ENSMUST00000005705 Kcnh5Q920E3 988 aa19.22■□□□□ 0.67
Trim28-201ENSMUST00000005705 Mctp1E9PV86 951 aa19.22■□□□□ 0.67
Trim28-201ENSMUST00000005705 Ubash3aQ3V3E1 624 aa19.22■□□□□ 0.67
Trim28-201ENSMUST00000005705 Cchcr1Q8K2I2 770 aa19.22■□□□□ 0.67
Trim28-201ENSMUST00000005705 Taf5lQ91WQ5 589 aa19.22■□□□□ 0.67
Trim28-201ENSMUST00000005705 Bag3Q9JLV1 577 aaKnown RBP19.22■□□□□ 0.67
Trim28-201ENSMUST00000005705 Tmem2Q5FWI3 1383 aa19.22■□□□□ 0.67
Trim28-201ENSMUST00000005705 EzrP26040 586 aaKnown RBP19.21■□□□□ 0.67
Trim28-201ENSMUST00000005705 Sass6Q80UK7 654 aa19.21■□□□□ 0.67
Trim28-201ENSMUST00000005705 Nfe2l3Q9WTM4 660 aa19.21■□□□□ 0.67
Trim28-201ENSMUST00000005705 Ptpn23Q6PB44 1692 aa19.21■□□□□ 0.67
Trim28-201ENSMUST00000005705 Wdr17E9Q271 1322 aa19.21■□□□□ 0.67
Trim28-201ENSMUST00000005705 Tns3Q5SSZ5 1440 aa19.21■□□□□ 0.67
Trim28-201ENSMUST00000005705 Cnksr1A2A9K7 700 aa19.21■□□□□ 0.67
Trim28-201ENSMUST00000005705 Tmem132aQ922P8 1018 aa19.21■□□□□ 0.67
Trim28-201ENSMUST00000005705 AceP09470 1312 aa19.2■□□□□ 0.66
Trim28-201ENSMUST00000005705 Arfgef2A2A5R2 1792 aa19.2■□□□□ 0.66
Trim28-201ENSMUST00000005705 Grm8P47743 908 aa19.2■□□□□ 0.66
Trim28-201ENSMUST00000005705 Soga3Q6NZL0 945 aa19.2■□□□□ 0.66
Trim28-201ENSMUST00000005705 Me3Q8BMF3 604 aa19.2■□□□□ 0.66
Trim28-201ENSMUST00000005705 Ccdc7Q9D541 371 aa19.2■□□□□ 0.66
Trim28-201ENSMUST00000005705 Zfp251Q6PCX8 632 aa19.2■□□□□ 0.66
Trim28-201ENSMUST00000005705 Ppp1r37Q8BKR5 712 aa19.2■□□□□ 0.66
Trim28-201ENSMUST00000005705 Cnpy2Q9QXT0 182 aa19.2■□□□□ 0.66
Trim28-201ENSMUST00000005705 Pcdh10E9PXQ7 1057 aa19.19■□□□□ 0.66
Trim28-201ENSMUST00000005705 Cct4P80315 539 aaKnown RBP19.19■□□□□ 0.66
Trim28-201ENSMUST00000005705 Ncoa4Q5U4H9 625 aa19.19■□□□□ 0.66
Trim28-201ENSMUST00000005705 Tbc1d31Q6NXY1 996 aa19.19■□□□□ 0.66
Trim28-201ENSMUST00000005705 Rbm33Q9CXK9 1231 aaKnown RBP19.19■□□□□ 0.66
Trim28-201ENSMUST00000005705 Slain2Q8CI08 581 aa19.19■□□□□ 0.66
Trim28-201ENSMUST00000005705 Kansl3A2RSY1 903 aaKnown RBP19.19■□□□□ 0.66
Trim28-201ENSMUST00000005705 Zkscan7E9PVW1 718 aa19.19■□□□□ 0.66
Trim28-201ENSMUST00000005705 Inpp5bQ8K337 993 aa19.19■□□□□ 0.66
Trim28-201ENSMUST00000005705 Trpm3Q5F4S9 1721 aa19.18■□□□□ 0.66
Trim28-201ENSMUST00000005705 NpeppsQ11011 920 aa19.18■□□□□ 0.66
Trim28-201ENSMUST00000005705 Tbc1d8Q9Z1A9 1134 aa19.18■□□□□ 0.66
Trim28-201ENSMUST00000005705 Adcy9P51830 1353 aa19.18■□□□□ 0.66
Trim28-201ENSMUST00000005705 Gm973E9Q295 1059 aa19.18■□□□□ 0.66
Trim28-201ENSMUST00000005705 CebpaP53566 359 aa19.18■□□□□ 0.66
Trim28-201ENSMUST00000005705 Golim4Q8BXA1 655 aa19.18■□□□□ 0.66
Trim28-201ENSMUST00000005705 Sh3bgrQ9WUZ7 214 aa19.18■□□□□ 0.66
Trim28-201ENSMUST00000005705 Sipa1l2Q80TE4 1722 aa19.18■□□□□ 0.66
Trim28-201ENSMUST00000005705 Tomm22Q9CPQ3 142 aa19.17■□□□□ 0.66
Trim28-201ENSMUST00000005705 Myo5bP21271 1818 aa19.17■□□□□ 0.66
Trim28-201ENSMUST00000005705 Card6E9PWH2 1175 aa19.17■□□□□ 0.66
Trim28-201ENSMUST00000005705 Larp6Q8BN59 492 aa19.17■□□□□ 0.66
Trim28-201ENSMUST00000005705 Rad17Q6NXW6 688 aa19.17■□□□□ 0.66
Trim28-201ENSMUST00000005705 Larp1Q6ZQ58 1072 aaKnown RBP19.17■□□□□ 0.66
Trim28-201ENSMUST00000005705 TnmdQ9EP64 317 aa19.17■□□□□ 0.66
Trim28-201ENSMUST00000005705 Mst1rQ62190 1378 aa19.17■□□□□ 0.66
Trim28-201ENSMUST00000005705 Kiaa0753Q6A000 959 aa19.16■□□□□ 0.66
Trim28-201ENSMUST00000005705 Tbc1d7Q9D0K0 293 aa19.16■□□□□ 0.66
Trim28-201ENSMUST00000005705 Spata31d1bE9QA57 1361 aa19.16■□□□□ 0.66
Retrieved 100 of 22,080 RNA–protein pairs in 24.3 ms