RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 ATP1A1-AS1Q5TC04 95 aa15.96■□□□□ 0.15
PHGDH-234ENST00000642041 ARHGAP22Q7Z5H3 698 aa15.96■□□□□ 0.15
PHGDH-234ENST00000642041 VTCN1Q7Z7D3 282 aa15.96■□□□□ 0.15
PHGDH-234ENST00000642041 AGBL5Q8NDL9 886 aa15.96■□□□□ 0.15
PHGDH-234ENST00000642041 GIMAP5Q96F15 307 aa15.96■□□□□ 0.15
PHGDH-234ENST00000642041 CCDC74BQ96LY2 380 aa15.96■□□□□ 0.15
PHGDH-234ENST00000642041 CNBD2Q96M20 576 aa15.96■□□□□ 0.15
PHGDH-234ENST00000642041 APOL4Q9BPW4 351 aa15.96■□□□□ 0.15
PHGDH-234ENST00000642041 G6PC3Q9BUM1 346 aa15.96■□□□□ 0.15
PHGDH-234ENST00000642041 ALOXE3Q9BYJ1 711 aa15.96■□□□□ 0.15
PHGDH-234ENST00000642041 SLC7A5P2Q9GIP4 190 aa15.96■□□□□ 0.15
PHGDH-234ENST00000642041 SAP130Q9H0E3 1048 aa15.96■□□□□ 0.15
PHGDH-234ENST00000642041 CXorf21Q9HAI6 301 aa15.96■□□□□ 0.15
PHGDH-234ENST00000642041 FGF21Q9NSA1 209 aa15.96■□□□□ 0.15
PHGDH-234ENST00000642041 MAT2BQ9NZL9 334 aa15.96■□□□□ 0.15
PHGDH-234ENST00000642041 TMEM9Q9P0T7 183 aa15.96■□□□□ 0.15
PHGDH-234ENST00000642041 SH3GLB1Q9Y371 365 aa15.96■□□□□ 0.15
PHGDH-234ENST00000642041 NAV3Q8IVL0 2385 aa15.95■□□□□ 0.14
PHGDH-234ENST00000642041 DSPPQ9NZW4 1301 aa15.95■□□□□ 0.14
PHGDH-234ENST00000642041 PDLIM1O00151 329 aa15.95■□□□□ 0.14
PHGDH-234ENST00000642041 PCDH17O14917 1159 aa15.95■□□□□ 0.14
PHGDH-234ENST00000642041 NKX2-2O95096 273 aa15.95■□□□□ 0.14
PHGDH-234ENST00000642041 GADD45GO95257 159 aa15.95■□□□□ 0.14
PHGDH-234ENST00000642041 H6PDO95479 791 aa15.95■□□□□ 0.14
PHGDH-234ENST00000642041 ONECUT2O95948 504 aa15.95■□□□□ 0.14
PHGDH-234ENST00000642041 LGI1O95970 557 aa15.95■□□□□ 0.14
PHGDH-234ENST00000642041 PABPC4LP0CB38 370 aaKnown RBP15.95■□□□□ 0.14
PHGDH-234ENST00000642041 IGFBP5P24593 272 aa15.95■□□□□ 0.14
PHGDH-234ENST00000642041 SEPHS1P49903 392 aa15.95■□□□□ 0.14
PHGDH-234ENST00000642041 RAB15P59190 212 aa15.95■□□□□ 0.14
PHGDH-234ENST00000642041 ADARB1P78563 741 aaKnown RBP15.95■□□□□ 0.14
PHGDH-234ENST00000642041 IL11RAQ14626 422 aa15.95■□□□□ 0.14
PHGDH-234ENST00000642041 DEFB110Q30KQ9 67 aa15.95■□□□□ 0.14
PHGDH-234ENST00000642041 KCTD21Q4G0X4 260 aa15.95■□□□□ 0.14
PHGDH-234ENST00000642041 IQCCQ4KMZ1 466 aa15.95■□□□□ 0.14
PHGDH-234ENST00000642041 RHBDD2Q6NTF9 364 aa15.95■□□□□ 0.14
PHGDH-234ENST00000642041 TMEM154Q6P9G4 183 aa15.95■□□□□ 0.14
PHGDH-234ENST00000642041 UGT2A3Q6UWM9 527 aa15.95■□□□□ 0.14
PHGDH-234ENST00000642041 TIPARPQ7Z3E1 657 aaKnown RBP15.95■□□□□ 0.14
PHGDH-234ENST00000642041 C8orf59Q8N0T1 100 aaPredicted RBP15.95■□□□□ 0.14
PHGDH-234ENST00000642041 TAGAPQ8N103 731 aa15.95■□□□□ 0.14
PHGDH-234ENST00000642041 OR7G2Q8NG99 324 aa15.95■□□□□ 0.14
PHGDH-234ENST00000642041 PHF10Q8WUB8 498 aaKnown RBP15.95■□□□□ 0.14
PHGDH-234ENST00000642041 RAB8BQ92930 207 aa15.95■□□□□ 0.14
PHGDH-234ENST00000642041 MAGED4Q96JG8 741 aa15.95■□□□□ 0.14
PHGDH-234ENST00000642041 CSF3RQ99062 836 aa15.95■□□□□ 0.14
PHGDH-234ENST00000642041 LMF2Q9BU23 707 aaKnown RBP15.95■□□□□ 0.14
PHGDH-234ENST00000642041 TGIF2Q9GZN2 237 aa15.95■□□□□ 0.14
PHGDH-234ENST00000642041 FAM192AQ9GZU8 254 aa15.95■□□□□ 0.14
PHGDH-234ENST00000642041 HOXD1Q9GZZ0 328 aa15.95■□□□□ 0.14
PHGDH-234ENST00000642041 KRCC1Q9NPI7 259 aaPredicted RBP15.95■□□□□ 0.14
PHGDH-234ENST00000642041 C14orf105Q9NVL8 296 aa15.95■□□□□ 0.14
PHGDH-234ENST00000642041 ERRFI1Q9UJM3 462 aaPredicted RBP15.95■□□□□ 0.14
PHGDH-234ENST00000642041 KCND3Q9UK17 655 aa15.95■□□□□ 0.14
PHGDH-234ENST00000642041 RARRES3Q9UL19 164 aa15.95■□□□□ 0.14
PHGDH-234ENST00000642041 POFUT2Q9Y2G5 429 aa15.95■□□□□ 0.14
PHGDH-234ENST00000642041 MRPS2Q9Y399 296 aaKnown RBP15.95■□□□□ 0.14
PHGDH-234ENST00000642041 WDR45Q9Y484 360 aa15.95■□□□□ 0.14
PHGDH-234ENST00000642041 MED13LQ71F56 2210 aa15.94■□□□□ 0.14
PHGDH-234ENST00000642041 B4E171 279 aa15.94■□□□□ 0.14
PHGDH-234ENST00000642041 H3BMH7 237 aa15.94■□□□□ 0.14
PHGDH-234ENST00000642041 HS6ST1O60243 411 aa15.94■□□□□ 0.14
PHGDH-234ENST00000642041 MRPS14O60783 128 aaKnown RBP15.94■□□□□ 0.14
PHGDH-234ENST00000642041 B4GALT2O60909 372 aa15.94■□□□□ 0.14
PHGDH-234ENST00000642041 PRKRAO75569 313 aaKnown RBP15.94■□□□□ 0.14
PHGDH-234ENST00000642041 CD247P20963 164 aa15.94■□□□□ 0.14
PHGDH-234ENST00000642041 CSTF2P33240 577 aaKnown RBP eCLIP15.94■□□□□ 0.14
PHGDH-234ENST00000642041 RYKP34925 604 aa15.94■□□□□ 0.14
PHGDH-234ENST00000642041 TSPAN7P41732 249 aa15.94■□□□□ 0.14
PHGDH-234ENST00000642041 GCGRP47871 477 aa15.94■□□□□ 0.14
PHGDH-234ENST00000642041 TPD52P55327 224 aaPredicted RBP15.94■□□□□ 0.14
PHGDH-234ENST00000642041 POU6F2P78424 691 aaPredicted RBP15.94■□□□□ 0.14
PHGDH-234ENST00000642041 COX10Q12887 443 aa15.94■□□□□ 0.14
PHGDH-234ENST00000642041 SYPL1Q16563 259 aa15.94■□□□□ 0.14
PHGDH-234ENST00000642041 MICAQ29983 383 aa15.94■□□□□ 0.14
PHGDH-234ENST00000642041 ZNF311Q5JNZ3 666 aa15.94■□□□□ 0.14
PHGDH-234ENST00000642041 C6orf52Q5T4I8 152 aa15.94■□□□□ 0.14
PHGDH-234ENST00000642041 KDM4DQ6B0I6 523 aa15.94■□□□□ 0.14
PHGDH-234ENST00000642041 USP51Q70EK9 711 aa15.94■□□□□ 0.14
PHGDH-234ENST00000642041 TSPYL5Q86VY4 417 aaPredicted RBP15.94■□□□□ 0.14
PHGDH-234ENST00000642041 SLC44A2Q8IWA5 706 aaPredicted RBP15.94■□□□□ 0.14
PHGDH-234ENST00000642041 CMIPQ8IY22 773 aa15.94■□□□□ 0.14
PHGDH-234ENST00000642041 COX18Q8N8Q8 333 aa15.94■□□□□ 0.14
PHGDH-234ENST00000642041 ATG16L2Q8NAA4 619 aa15.94■□□□□ 0.14
PHGDH-234ENST00000642041 PLPP5Q8NEB5 264 aa15.94■□□□□ 0.14
PHGDH-234ENST00000642041 PRR7Q8TB68 274 aa15.94■□□□□ 0.14
PHGDH-234ENST00000642041 CYGBQ8WWM9 190 aa15.94■□□□□ 0.14
PHGDH-234ENST00000642041 KAT2AQ92830 837 aa15.94■□□□□ 0.14
PHGDH-234ENST00000642041 DAZLQ92904 295 aaKnown RBP15.94■□□□□ 0.14
PHGDH-234ENST00000642041 UCN3Q969E3 161 aa15.94■□□□□ 0.14
PHGDH-234ENST00000642041 ZNF501Q96CX3 271 aaPredicted RBP15.94■□□□□ 0.14
PHGDH-234ENST00000642041 RMND5BQ96G75 393 aaPredicted RBP15.94■□□□□ 0.14
PHGDH-234ENST00000642041 PEX11GQ96HA9 241 aa15.94■□□□□ 0.14
PHGDH-234ENST00000642041 HHATLQ9HCP6 504 aa15.94■□□□□ 0.14
PHGDH-234ENST00000642041 Q9N2J8 555 aa15.94■□□□□ 0.14
PHGDH-234ENST00000642041 PDP1Q9P0J1 537 aaPredicted RBP15.94■□□□□ 0.14
PHGDH-234ENST00000642041 ACAD8Q9UKU7 415 aa15.94■□□□□ 0.14
PHGDH-234ENST00000642041 MGAT4BQ9UQ53 548 aa15.94■□□□□ 0.14
PHGDH-234ENST00000642041 ZNF860A6NHJ4 632 aa15.93■□□□□ 0.14
PHGDH-234ENST00000642041 A8MU76 341 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms