RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 DCAF13Q9NV06 445 aaKnown RBP16.08■□□□□ 0.16
PHGDH-230ENST00000641927 FLRT3Q9NZU0 649 aa16.08■□□□□ 0.16
PHGDH-230ENST00000641927 ABI3Q9P2A4 366 aa16.08■□□□□ 0.16
PHGDH-230ENST00000641927 ZNF232Q9UNY5 417 aa16.08■□□□□ 0.16
PHGDH-230ENST00000641927 SAMD4AQ9UPU9 718 aaKnown RBP16.08■□□□□ 0.16
PHGDH-230ENST00000641927 KCNMB2Q9Y691 235 aa16.08■□□□□ 0.16
PHGDH-230ENST00000641927 ACACAQ13085 2346 aa16.08■□□□□ 0.16
PHGDH-230ENST00000641927 CENPVL1A0A0U1RR11 272 aa16.07■□□□□ 0.16
PHGDH-230ENST00000641927 AGAP5A6NIR3 686 aa16.07■□□□□ 0.16
PHGDH-230ENST00000641927 SCDO00767 359 aa16.07■□□□□ 0.16
PHGDH-230ENST00000641927 DBIP07108 87 aaKnown RBP16.07■□□□□ 0.16
PHGDH-230ENST00000641927 GUSBP08236 651 aa16.07■□□□□ 0.16
PHGDH-230ENST00000641927 FBXO45P0C2W1 286 aa16.07■□□□□ 0.16
PHGDH-230ENST00000641927 PABPC4LP0CB38 370 aaKnown RBP16.07■□□□□ 0.16
PHGDH-230ENST00000641927 ATP12AP54707 1039 aa16.07■□□□□ 0.16
PHGDH-230ENST00000641927 ACTR3P61158 418 aa16.07■□□□□ 0.16
PHGDH-230ENST00000641927 CCNIQ14094 377 aa16.07■□□□□ 0.16
PHGDH-230ENST00000641927 LARS2Q15031 903 aaKnown RBP16.07■□□□□ 0.16
PHGDH-230ENST00000641927 MAPK14Q16539 360 aa16.07■□□□□ 0.16
PHGDH-230ENST00000641927 GRAMD1BQ3KR37 738 aa16.07■□□□□ 0.16
PHGDH-230ENST00000641927 MTX3Q5HYI7 312 aa16.07■□□□□ 0.16
PHGDH-230ENST00000641927 PDZK1Q5T2W1 519 aa16.07■□□□□ 0.16
PHGDH-230ENST00000641927 FKBP9P1Q75LS8 142 aa16.07■□□□□ 0.16
PHGDH-230ENST00000641927 EID3Q8N140 333 aa16.07■□□□□ 0.16
PHGDH-230ENST00000641927 ZNF527Q8NB42 609 aa16.07■□□□□ 0.16
PHGDH-230ENST00000641927 LZICQ8WZA0 190 aa16.07■□□□□ 0.16
PHGDH-230ENST00000641927 PMM1Q92871 262 aa16.07■□□□□ 0.16
PHGDH-230ENST00000641927 TMCO6Q96DC7 493 aa16.07■□□□□ 0.16
PHGDH-230ENST00000641927 HOXD1Q9GZZ0 328 aa16.07■□□□□ 0.16
PHGDH-230ENST00000641927 HPF1Q9NWY4 346 aa16.07■□□□□ 0.16
PHGDH-230ENST00000641927 KCNE5Q9UJ90 142 aa16.07■□□□□ 0.16
PHGDH-230ENST00000641927 PCDHGA10Q9Y5H3 936 aa16.07■□□□□ 0.16
PHGDH-230ENST00000641927 AQP12BA6NM10 295 aa16.06■□□□□ 0.16
PHGDH-230ENST00000641927 PRKD3O94806 890 aa16.06■□□□□ 0.16
PHGDH-230ENST00000641927 F10P00742 488 aa16.06■□□□□ 0.16
PHGDH-230ENST00000641927 LCN1P31025 176 aa16.06■□□□□ 0.16
PHGDH-230ENST00000641927 SOX8P57073 446 aa16.06■□□□□ 0.16
PHGDH-230ENST00000641927 TMPRSS3P57727 454 aa16.06■□□□□ 0.16
PHGDH-230ENST00000641927 OC90Q02509 493 aaPredicted RBP16.06■□□□□ 0.16
PHGDH-230ENST00000641927 ENPP6Q6UWR7 440 aa16.06■□□□□ 0.16
PHGDH-230ENST00000641927 LYPD8Q6UX82 237 aa16.06■□□□□ 0.16
PHGDH-230ENST00000641927 AQP12AQ8IXF9 295 aa16.06■□□□□ 0.16
PHGDH-230ENST00000641927 OR10G3Q8NGC4 313 aa16.06■□□□□ 0.16
PHGDH-230ENST00000641927 RASSF5Q8WWW0 418 aa16.06■□□□□ 0.16
PHGDH-230ENST00000641927 RNF145Q96MT1 663 aa16.06■□□□□ 0.16
PHGDH-230ENST00000641927 SEPHS2Q99611 448 aa16.06■□□□□ 0.16
PHGDH-230ENST00000641927 SLC13A4Q9UKG4 626 aa16.06■□□□□ 0.16
PHGDH-230ENST00000641927 AURKCQ9UQB9 309 aa16.06■□□□□ 0.16
PHGDH-230ENST00000641927 ZNF443Q9Y2A4 671 aaPredicted RBP16.06■□□□□ 0.16
PHGDH-230ENST00000641927 IFT52Q9Y366 437 aa16.06■□□□□ 0.16
PHGDH-230ENST00000641927 URB1O60287 2271 aaKnown RBP16.06■□□□□ 0.16
PHGDH-230ENST00000641927 TCRBV5S2A0A599 114 aa16.05■□□□□ 0.16
PHGDH-230ENST00000641927 CLDN24A6NM45 220 aa16.05■□□□□ 0.16
PHGDH-230ENST00000641927 ENTPD5O75356 428 aa16.05■□□□□ 0.16
PHGDH-230ENST00000641927 UCNP55089 124 aa16.05■□□□□ 0.16
PHGDH-230ENST00000641927 SELENOWP63302 87 aa16.05■□□□□ 0.16
PHGDH-230ENST00000641927 DUSP7Q16829 419 aa16.05■□□□□ 0.16
PHGDH-230ENST00000641927 ZNF791Q3KP31 576 aaPredicted RBP16.05■□□□□ 0.16
PHGDH-230ENST00000641927 LIN52Q52LA3 116 aa16.05■□□□□ 0.16
PHGDH-230ENST00000641927 CBLL1Q75N03 491 aa16.05■□□□□ 0.16
PHGDH-230ENST00000641927 EIF3MQ7L2H7 374 aaKnown RBP16.05■□□□□ 0.16
PHGDH-230ENST00000641927 NUP54Q7Z3B4 507 aa16.05■□□□□ 0.16
PHGDH-230ENST00000641927 VTCN1Q7Z7D3 282 aa16.05■□□□□ 0.16
PHGDH-230ENST00000641927 FAM86B1Q8N7N1 296 aa16.05■□□□□ 0.16
PHGDH-230ENST00000641927 OR52E4Q8NGH9 312 aa16.05■□□□□ 0.16
PHGDH-230ENST00000641927 PROX1Q92786 737 aa16.05■□□□□ 0.16
PHGDH-230ENST00000641927 HSH2DQ96JZ2 352 aa16.05■□□□□ 0.16
PHGDH-230ENST00000641927 DOHHQ9BU89 302 aa16.05■□□□□ 0.16
PHGDH-230ENST00000641927 TBL1XR1Q9BZK7 514 aa16.05■□□□□ 0.16
PHGDH-230ENST00000641927 DOCK10Q96BY6 2186 aa16.05■□□□□ 0.16
PHGDH-230ENST00000641927 K7ENP7 123 aa16.05■□□□□ 0.16
PHGDH-230ENST00000641927 TAF4O00268 1085 aa16.05■□□□□ 0.16
PHGDH-230ENST00000641927 TP53I11O14683 189 aa16.05■□□□□ 0.16
PHGDH-230ENST00000641927 TPST1O60507 370 aa16.05■□□□□ 0.16
PHGDH-230ENST00000641927 OXSR1O95747 527 aaPredicted RBP16.05■□□□□ 0.16
PHGDH-230ENST00000641927 THBS1P07996 1170 aa16.05■□□□□ 0.16
PHGDH-230ENST00000641927 TBXA2RP21731 343 aa16.05■□□□□ 0.16
PHGDH-230ENST00000641927 RPS4Y1P22090 263 aaKnown RBP16.05■□□□□ 0.16
PHGDH-230ENST00000641927 PSMA4P25789 261 aaKnown RBP16.05■□□□□ 0.16
PHGDH-230ENST00000641927 CASRP41180 1078 aa16.05■□□□□ 0.16
PHGDH-230ENST00000641927 ELOAQ14241 798 aaKnown RBP16.05■□□□□ 0.16
PHGDH-230ENST00000641927 ZNF141Q15928 474 aa16.05■□□□□ 0.16
PHGDH-230ENST00000641927 NTRK2Q16620 822 aa16.05■□□□□ 0.16
PHGDH-230ENST00000641927 ZNF468Q5VIY5 522 aaPredicted RBP16.05■□□□□ 0.16
PHGDH-230ENST00000641927 INO80CQ6PI98 192 aaPredicted RBP16.05■□□□□ 0.16
PHGDH-230ENST00000641927 ISLR2Q6UXK2 745 aa16.05■□□□□ 0.16
PHGDH-230ENST00000641927 APLFQ8IW19 511 aaPredicted RBP16.05■□□□□ 0.16
PHGDH-230ENST00000641927 DND1Q8IYX4 353 aaKnown RBP16.05■□□□□ 0.16
PHGDH-230ENST00000641927 GATSQ8NAP1 163 aa16.05■□□□□ 0.16
PHGDH-230ENST00000641927 FDCSPQ8NFU4 85 aa16.05■□□□□ 0.16
PHGDH-230ENST00000641927 APOBEC4Q8WW27 367 aaKnown RBP16.05■□□□□ 0.16
PHGDH-230ENST00000641927 PYURFQ96I23 114 aa16.05■□□□□ 0.16
PHGDH-230ENST00000641927 NODALQ96S42 347 aa16.05■□□□□ 0.16
PHGDH-230ENST00000641927 UGT2B28Q9BY64 529 aa16.05■□□□□ 0.16
PHGDH-230ENST00000641927 OLAHQ9NV23 265 aa16.05■□□□□ 0.16
PHGDH-230ENST00000641927 MED13Q9UHV7 2174 aa16.05■□□□□ 0.16
PHGDH-230ENST00000641927 BAG5Q9UL15 447 aa16.05■□□□□ 0.16
PHGDH-230ENST00000641927 SH3GLB1Q9Y371 365 aa16.05■□□□□ 0.16
PHGDH-230ENST00000641927 DTNAQ9Y4J8 743 aa16.05■□□□□ 0.16
PHGDH-230ENST00000641927 LOC400499M0QZD8 3231 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms