RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 PSMG3-AS1Q96PY0 264 aa24.29■■□□□ 1.48
VEGFA-231ENST00000640499 SDF2Q99470 211 aa24.29■■□□□ 1.48
VEGFA-231ENST00000640499 MEMO1Q9Y316 297 aa24.29■■□□□ 1.48
VEGFA-231ENST00000640499 USP9YO00507 2555 aaPredicted RBP24.29■■□□□ 1.48
VEGFA-231ENST00000640499 NPIPA5A0A0B4J1W7 369 aa24.28■■□□□ 1.48
VEGFA-231ENST00000640499 OR14I1A6ND48 311 aa24.28■■□□□ 1.48
VEGFA-231ENST00000640499 ALG1L2C9J202 215 aa24.28■■□□□ 1.48
VEGFA-231ENST00000640499 NPIPA7E9PJI5 369 aa24.28■■□□□ 1.48
VEGFA-231ENST00000640499 NPIPB9F8W1W9 429 aa24.28■■□□□ 1.48
VEGFA-231ENST00000640499 ZIC3O60481 467 aa24.28■■□□□ 1.48
VEGFA-231ENST00000640499 NPIPA8P0DM63 369 aa24.28■■□□□ 1.48
VEGFA-231ENST00000640499 FUT5Q11128 374 aa24.28■■□□□ 1.48
VEGFA-231ENST00000640499 RCAN2Q14206 197 aa24.28■■□□□ 1.48
VEGFA-231ENST00000640499 GTDC1Q4AE62 458 aa24.28■■□□□ 1.48
VEGFA-231ENST00000640499 HEPHL1Q6MZM0 1159 aa24.28■■□□□ 1.48
VEGFA-231ENST00000640499 TNFAIP8L2Q6P589 184 aaPredicted RBP24.28■■□□□ 1.48
VEGFA-231ENST00000640499 ZNF621Q6ZSS3 439 aa24.28■■□□□ 1.48
VEGFA-231ENST00000640499 CHDHQ8NE62 594 aaPredicted RBP24.28■■□□□ 1.48
VEGFA-231ENST00000640499 OR2M3Q8NG83 312 aa24.28■■□□□ 1.48
VEGFA-231ENST00000640499 GTF2H4Q92759 462 aa24.28■■□□□ 1.48
VEGFA-231ENST00000640499 RAB8BQ92930 207 aa24.28■■□□□ 1.48
VEGFA-231ENST00000640499 ZNF317Q96PQ6 595 aaPredicted RBP24.28■■□□□ 1.48
VEGFA-231ENST00000640499 G6PC3Q9BUM1 346 aa24.28■■□□□ 1.48
VEGFA-231ENST00000640499 OR2B2Q9GZK3 357 aa24.28■■□□□ 1.48
VEGFA-231ENST00000640499 DSN1Q9H410 356 aa24.28■■□□□ 1.48
VEGFA-231ENST00000640499 MED11Q9P086 117 aa24.28■■□□□ 1.48
VEGFA-231ENST00000640499 SLC6A5Q9Y345 797 aa24.28■■□□□ 1.48
VEGFA-231ENST00000640499 DOPEY1Q5JWR5 2465 aa24.28■■□□□ 1.48
VEGFA-231ENST00000640499 IGLV3-32A0A0A0MS00 114 aa24.27■■□□□ 1.48
VEGFA-231ENST00000640499 A0A0G2JND7 137 aa24.27■■□□□ 1.48
VEGFA-231ENST00000640499 RFXANKO14593 260 aa24.27■■□□□ 1.48
VEGFA-231ENST00000640499 PRRG2O14669 202 aa24.27■■□□□ 1.48
VEGFA-231ENST00000640499 FCMRO60667 390 aa24.27■■□□□ 1.48
VEGFA-231ENST00000640499 SOX30O94993 753 aa24.27■■□□□ 1.48
VEGFA-231ENST00000640499 ANGPTL1O95841 491 aa24.27■■□□□ 1.48
VEGFA-231ENST00000640499 OR12D1P0DN82 309 aa24.27■■□□□ 1.48
VEGFA-231ENST00000640499 HOXB9P17482 250 aaPredicted RBP24.27■■□□□ 1.48
VEGFA-231ENST00000640499 LCN1P31025 176 aa24.27■■□□□ 1.48
VEGFA-231ENST00000640499 MVDP53602 400 aa24.27■■□□□ 1.48
VEGFA-231ENST00000640499 STX1BP61266 288 aa24.27■■□□□ 1.48
VEGFA-231ENST00000640499 ADORA2A-AS1P86434 159 aa24.27■■□□□ 1.48
VEGFA-231ENST00000640499 LRRC74AQ0VAA2 488 aa24.27■■□□□ 1.48
VEGFA-231ENST00000640499 STX5Q13190 355 aa24.27■■□□□ 1.48
VEGFA-231ENST00000640499 SLC2A7Q6PXP3 512 aa24.27■■□□□ 1.48
VEGFA-231ENST00000640499 MSANTD1Q6ZTZ1 278 aa24.27■■□□□ 1.48
VEGFA-231ENST00000640499 RNF130Q86XS8 419 aa24.27■■□□□ 1.48
VEGFA-231ENST00000640499 RPRMLQ8N4K4 120 aa24.27■■□□□ 1.48
VEGFA-231ENST00000640499 MARVELD2Q8N4S9 558 aa24.27■■□□□ 1.48
VEGFA-231ENST00000640499 OR5M9Q8NGP3 310 aa24.27■■□□□ 1.48
VEGFA-231ENST00000640499 ZFP90Q8TF47 636 aa24.27■■□□□ 1.48
VEGFA-231ENST00000640499 CCDC120Q96HB5 630 aa24.27■■□□□ 1.48
VEGFA-231ENST00000640499 DMRTA2Q96SC8 542 aa24.27■■□□□ 1.48
VEGFA-231ENST00000640499 KLHDC3Q9BQ90 382 aa24.27■■□□□ 1.48
VEGFA-231ENST00000640499 SIKE1Q9BRV8 207 aa24.27■■□□□ 1.48
VEGFA-231ENST00000640499 UBQLN4Q9NRR5 601 aa24.27■■□□□ 1.48
VEGFA-231ENST00000640499 CCDC167Q9P0B6 97 aa24.27■■□□□ 1.48
VEGFA-231ENST00000640499 PPP4R1LQ9P1A2 415 aa24.27■■□□□ 1.48
VEGFA-231ENST00000640499 ZG16O60844 167 aa24.26■■□□□ 1.47
VEGFA-231ENST00000640499 CAPN3P20807 821 aa24.26■■□□□ 1.47
VEGFA-231ENST00000640499 CRYZQ08257 329 aaKnown RBP24.26■■□□□ 1.47
VEGFA-231ENST00000640499 SF3A3Q12874 501 aaKnown RBP eCLIP24.26■■□□□ 1.479e-12■■■■■ 32
VEGFA-231ENST00000640499 SQLEQ14534 574 aa24.26■■□□□ 1.47
VEGFA-231ENST00000640499 TOMM20Q15388 145 aa24.26■■□□□ 1.47
VEGFA-231ENST00000640499 ARHGAP11BQ3KRB8 267 aa24.26■■□□□ 1.47
VEGFA-231ENST00000640499 COX20Q5RI15 118 aa24.26■■□□□ 1.47
VEGFA-231ENST00000640499 DCST1Q5T197 706 aa24.26■■□□□ 1.47
VEGFA-231ENST00000640499 DDX59Q5T1V6 619 aaKnown RBP eCLIP24.26■■□□□ 1.471e-7■□□□□ 10.9
VEGFA-231ENST00000640499 DNAJC14Q6Y2X3 702 aaPredicted RBP24.26■■□□□ 1.47
VEGFA-231ENST00000640499 TMEM120AQ9BXJ8 343 aa24.26■■□□□ 1.47
VEGFA-231ENST00000640499 TBL1XR1Q9BZK7 514 aa24.26■■□□□ 1.47
VEGFA-231ENST00000640499 PAIP1Q9H074 479 aaKnown RBP24.26■■□□□ 1.47
VEGFA-231ENST00000640499 KCNE5Q9UJ90 142 aa24.26■■□□□ 1.47
VEGFA-231ENST00000640499 PCDHGB3Q9Y5G1 929 aa24.26■■□□□ 1.47
VEGFA-231ENST00000640499 PCNX1Q96RV3 2341 aa24.26■■□□□ 1.47
VEGFA-231ENST00000640499 PTPN13Q12923 2485 aa24.25■■□□□ 1.47
VEGFA-231ENST00000640499 NCOA6Q14686 2063 aaPredicted RBP24.25■■□□□ 1.47
VEGFA-231ENST00000640499 DUXAA6NLW8 204 aa24.25■■□□□ 1.47
VEGFA-231ENST00000640499 VIMP08670 466 aaKnown RBP24.25■■□□□ 1.47
VEGFA-231ENST00000640499 ZCCHC18P0CG32 403 aa24.25■■□□□ 1.47
VEGFA-231ENST00000640499 BMP7P18075 431 aa24.25■■□□□ 1.47
VEGFA-231ENST00000640499 SRD5A2P31213 254 aa24.25■■□□□ 1.47
VEGFA-231ENST00000640499 CHI3L1P36222 383 aaPredicted RBP24.25■■□□□ 1.47
VEGFA-231ENST00000640499 CASP6P55212 293 aa24.25■■□□□ 1.47
VEGFA-231ENST00000640499 CD226Q15762 336 aa24.25■■□□□ 1.47
VEGFA-231ENST00000640499 KLHL26Q53HC5 615 aa24.25■■□□□ 1.47
VEGFA-231ENST00000640499 NHSL2Q5HYW2 709 aa24.25■■□□□ 1.47
VEGFA-231ENST00000640499 VASNQ6EMK4 673 aa24.25■■□□□ 1.47
VEGFA-231ENST00000640499 RTL6Q6ICC9 239 aa24.25■■□□□ 1.47
VEGFA-231ENST00000640499 GATSQ8NAP1 163 aa24.25■■□□□ 1.47
VEGFA-231ENST00000640499 ITCHQ96J02 903 aa24.25■■□□□ 1.47
VEGFA-231ENST00000640499 TIMP4Q99727 224 aa24.25■■□□□ 1.47
VEGFA-231ENST00000640499 EXO5Q9H790 373 aa24.25■■□□□ 1.47
VEGFA-231ENST00000640499 MRPS18CQ9Y3D5 142 aaKnown RBP24.25■■□□□ 1.47
VEGFA-231ENST00000640499 HMGN4O00479 90 aa24.24■■□□□ 1.47
VEGFA-231ENST00000640499 BCKDKO14874 412 aa24.24■■□□□ 1.47
VEGFA-231ENST00000640499 NCF2P19878 526 aaPredicted RBP24.24■■□□□ 1.47
VEGFA-231ENST00000640499 RNF144AP50876 292 aaPredicted RBP24.24■■□□□ 1.47
VEGFA-231ENST00000640499 B3GALT5-AS1P59052 145 aa24.24■■□□□ 1.47
VEGFA-231ENST00000640499 AGKQ53H12 422 aa24.24■■□□□ 1.47
VEGFA-231ENST00000640499 PAGE3Q5JUK9 113 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms