RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 DEFB119Q8N690 84 aa20.01■□□□□ 0.79
CLN6-224ENST00000638076 RBCK1Q9BYM8 510 aa20.01■□□□□ 0.79
CLN6-224ENST00000638076 KNL1Q8NG31 2342 aa20■□□□□ 0.79
CLN6-224ENST00000638076 SLC9B1P1A6NJY1 282 aa20■□□□□ 0.79
CLN6-224ENST00000638076 KPNA4O00629 521 aaPredicted RBP20■□□□□ 0.79
CLN6-224ENST00000638076 KLF4O43474 513 aa20■□□□□ 0.79
CLN6-224ENST00000638076 CHST10O43529 356 aa20■□□□□ 0.79
CLN6-224ENST00000638076 APOL3O95236 402 aa20■□□□□ 0.79
CLN6-224ENST00000638076 CH25HO95992 272 aa20■□□□□ 0.79
CLN6-224ENST00000638076 ETV5P41161 510 aa20■□□□□ 0.79
CLN6-224ENST00000638076 MAP3K8P41279 467 aa20■□□□□ 0.79
CLN6-224ENST00000638076 ETV1P50549 477 aa20■□□□□ 0.79
CLN6-224ENST00000638076 KHDRBS1Q07666 443 aaKnown RBP eCLIP20■□□□□ 0.79
CLN6-224ENST00000638076 TRIM16LQ309B1 348 aa20■□□□□ 0.79
CLN6-224ENST00000638076 KLHL22Q53GT1 634 aa20■□□□□ 0.79
CLN6-224ENST00000638076 MCATQ8IVS2 390 aaKnown RBP20■□□□□ 0.79
CLN6-224ENST00000638076 ARHGEF39Q8N4T4 335 aa20■□□□□ 0.79
CLN6-224ENST00000638076 ANKK1Q8NFD2 765 aa20■□□□□ 0.79
CLN6-224ENST00000638076 TOR1AIP2Q8NFQ8 470 aa20■□□□□ 0.79
CLN6-224ENST00000638076 OSTF1Q92882 214 aa20■□□□□ 0.79
CLN6-224ENST00000638076 PRRG3Q9BZD7 231 aa20■□□□□ 0.79
CLN6-224ENST00000638076 CAPN10Q9HC96 672 aa20■□□□□ 0.79
CLN6-224ENST00000638076 EXOSC4Q9NPD3 245 aaKnown RBP20■□□□□ 0.79
CLN6-224ENST00000638076 IL20Q9NYY1 176 aa20■□□□□ 0.79
CLN6-224ENST00000638076 NLGN3Q9NZ94 848 aa20■□□□□ 0.79
CLN6-224ENST00000638076 CARD8Q9Y2G2 431 aa20■□□□□ 0.79
CLN6-224ENST00000638076 GXYLT2A0PJZ3 443 aa19.99■□□□□ 0.79
CLN6-224ENST00000638076 PPP5CP53041 499 aa19.99■□□□□ 0.79
CLN6-224ENST00000638076 GAS1P54826 345 aa19.99■□□□□ 0.79
CLN6-224ENST00000638076 POU6F2P78424 691 aaPredicted RBP19.99■□□□□ 0.79
CLN6-224ENST00000638076 POGLUT1Q8NBL1 392 aa19.99■□□□□ 0.79
CLN6-224ENST00000638076 OR4Q3Q8NH05 313 aa19.99■□□□□ 0.79
CLN6-224ENST00000638076 RNFT2Q96EX2 444 aa19.99■□□□□ 0.79
CLN6-224ENST00000638076 MROQ9BYG7 248 aa19.99■□□□□ 0.79
CLN6-224ENST00000638076 LMAN1LQ9HAT1 526 aa19.99■□□□□ 0.79
CLN6-224ENST00000638076 IL20RAQ9UHF4 553 aa19.99■□□□□ 0.79
CLN6-224ENST00000638076 IGHV1OR15-9A0A0B4J2B8 117 aa19.99■□□□□ 0.79
CLN6-224ENST00000638076 SNTNA6NMZ2 147 aa19.99■□□□□ 0.79
CLN6-224ENST00000638076 CDC42EP2O14613 210 aa19.99■□□□□ 0.79
CLN6-224ENST00000638076 OR10H2O60403 315 aa19.99■□□□□ 0.79
CLN6-224ENST00000638076 SLC35E2P0CK97 266 aa19.99■□□□□ 0.79
CLN6-224ENST00000638076 HTR2AP28223 471 aa19.99■□□□□ 0.79
CLN6-224ENST00000638076 MLLT11Q13015 90 aaPredicted RBP19.99■□□□□ 0.79
CLN6-224ENST00000638076 GAS6Q14393 721 aa19.99■□□□□ 0.79
CLN6-224ENST00000638076 VWA5B2Q8N398 1253 aa19.99■□□□□ 0.79
CLN6-224ENST00000638076 OR52R1Q8NGF1 315 aa19.99■□□□□ 0.79
CLN6-224ENST00000638076 CNPPD1Q9BV87 410 aa19.99■□□□□ 0.79
CLN6-224ENST00000638076 SLC2A4RGQ9NR83 387 aa19.99■□□□□ 0.79
CLN6-224ENST00000638076 MRPS18AQ9NVS2 196 aaKnown RBP19.99■□□□□ 0.79
CLN6-224ENST00000638076 A0A0A6YYC8 382 aaPredicted RBP19.98■□□□□ 0.79
CLN6-224ENST00000638076 KRBA1A5PL33 1030 aa19.98■□□□□ 0.79
CLN6-224ENST00000638076 TRAPPC13A5PLN9 417 aa19.98■□□□□ 0.79
CLN6-224ENST00000638076 CDHR4A6H8M9 788 aa19.98■□□□□ 0.79
CLN6-224ENST00000638076 I3L1I5 382 aaPredicted RBP19.98■□□□□ 0.79
CLN6-224ENST00000638076 WWP2O00308 870 aa19.98■□□□□ 0.79
CLN6-224ENST00000638076 CBX7O95931 251 aa19.98■□□□□ 0.79
CLN6-224ENST00000638076 ENDOUP21128 410 aaKnown RBP19.98■□□□□ 0.79
CLN6-224ENST00000638076 PSMA1P25786 263 aaKnown RBP19.98■□□□□ 0.79
CLN6-224ENST00000638076 RAB40BQ12829 278 aa19.98■□□□□ 0.79
CLN6-224ENST00000638076 ZNF155Q12901 538 aaPredicted RBP19.98■□□□□ 0.79
CLN6-224ENST00000638076 SRSF5Q13243 272 aaKnown RBP19.98■□□□□ 0.79
CLN6-224ENST00000638076 OXA1LQ15070 435 aa19.98■□□□□ 0.79
CLN6-224ENST00000638076 ZNF620Q6ZNG0 422 aa19.98■□□□□ 0.79
CLN6-224ENST00000638076 PRSS27Q9BQR3 290 aa19.98■□□□□ 0.79
CLN6-224ENST00000638076 CFL2Q9Y281 166 aa19.98■□□□□ 0.79
CLN6-224ENST00000638076 BRINP1O60477 761 aa19.98■□□□□ 0.79
CLN6-224ENST00000638076 AK1P00568 194 aa19.98■□□□□ 0.79
CLN6-224ENST00000638076 WNT1P04628 370 aa19.98■□□□□ 0.79
CLN6-224ENST00000638076 MYL12AP19105 171 aa19.98■□□□□ 0.79
CLN6-224ENST00000638076 SOX6P35712 828 aa19.98■□□□□ 0.79
CLN6-224ENST00000638076 MTNR1AP48039 350 aa19.98■□□□□ 0.79
CLN6-224ENST00000638076 OR1Q1Q15612 314 aa19.98■□□□□ 0.79
CLN6-224ENST00000638076 MINDY4Q4G0A6 757 aa19.98■□□□□ 0.79
CLN6-224ENST00000638076 LIPKQ5VXJ0 399 aa19.98■□□□□ 0.79
CLN6-224ENST00000638076 PPP1R14BQ96C90 147 aa19.98■□□□□ 0.79
CLN6-224ENST00000638076 PHF7Q9BWX1 381 aaPredicted RBP19.98■□□□□ 0.79
CLN6-224ENST00000638076 TTYH1Q9H313 450 aaPredicted RBP19.98■□□□□ 0.79
CLN6-224ENST00000638076 NDUFB11Q9NX14 153 aa19.98■□□□□ 0.79
CLN6-224ENST00000638076 KDM4EB2RXH2 506 aaPredicted RBP19.97■□□□□ 0.79
CLN6-224ENST00000638076 CHURC1-FNTBB4DL54 471 aa19.97■□□□□ 0.79
CLN6-224ENST00000638076 SURF4O15260 269 aa19.97■□□□□ 0.79
CLN6-224ENST00000638076 ZNF217O75362 1048 aa19.97■□□□□ 0.79
CLN6-224ENST00000638076 MED26O95402 600 aa19.97■□□□□ 0.79
CLN6-224ENST00000638076 IFI6P09912 130 aa19.97■□□□□ 0.79
CLN6-224ENST00000638076 S100A5P33763 92 aa19.97■□□□□ 0.79
CLN6-224ENST00000638076 BMP8BP34820 402 aa19.97■□□□□ 0.79
CLN6-224ENST00000638076 CRYBB2P43320 205 aa19.97■□□□□ 0.79
CLN6-224ENST00000638076 RFX3P48380 749 aa19.97■□□□□ 0.79
CLN6-224ENST00000638076 C3orf38Q5JPI3 329 aa19.97■□□□□ 0.79
CLN6-224ENST00000638076 WDR88Q6ZMY6 472 aa19.97■□□□□ 0.79
CLN6-224ENST00000638076 ZNF554Q86TJ5 538 aa19.97■□□□□ 0.79
CLN6-224ENST00000638076 ARL14Q8N4G2 192 aa19.97■□□□□ 0.79
CLN6-224ENST00000638076 MAP3K3Q99759 626 aa19.97■□□□□ 0.79
CLN6-224ENST00000638076 TEX12Q9BXU0 123 aa19.97■□□□□ 0.79
CLN6-224ENST00000638076 KRCC1Q9NPI7 259 aaPredicted RBP19.97■□□□□ 0.79
CLN6-224ENST00000638076 HCN3Q9P1Z3 774 aa19.97■□□□□ 0.79
CLN6-224ENST00000638076 SEC14L4Q9UDX3 406 aa19.97■□□□□ 0.79
CLN6-224ENST00000638076 GON4LQ3T8J9 2241 aa19.97■□□□□ 0.79
CLN6-224ENST00000638076 FUOMA2VDF0 154 aa19.97■□□□□ 0.79
CLN6-224ENST00000638076 CD40LGP29965 261 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms