RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 HPF1Q9NWY4 346 aa6.19□□□□□ -1.42
UPF3B-205ENST00000636792 TMEM181Q9P2C4 612 aa6.19□□□□□ -1.42
UPF3B-205ENST00000636792 MAGEL2Q9UJ55 1249 aa6.19□□□□□ -1.42
UPF3B-205ENST00000636792 ZMIZ1Q9ULJ6 1067 aa6.19□□□□□ -1.42
UPF3B-205ENST00000636792 ERVK-11Q9UQG0 969 aa6.19□□□□□ -1.42
UPF3B-205ENST00000636792 IFT52Q9Y366 437 aa6.19□□□□□ -1.42
UPF3B-205ENST00000636792 WDFY3Q8IZQ1 3526 aa6.19□□□□□ -1.42
UPF3B-205ENST00000636792 CEP295Q9C0D2 2601 aa6.19□□□□□ -1.42
UPF3B-205ENST00000636792 ELOVL7A1L3X0 281 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 OR5H15A6NDH6 313 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 B2RBV5 119 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 C5orf58C9J3I9 102 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 H3BNH8 94 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 HRKO00198 91 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 GYG2O15488 501 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 TSPAN2O60636 221 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 DPM1O60762 260 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 KCNK2O95069 426 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 SNX4O95219 450 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 STAMBPO95630 424 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 GSNP06396 782 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 TFPTP0C1Z6 253 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 EFNA1P20827 205 aaPredicted RBP6.18□□□□□ -1.42
UPF3B-205ENST00000636792 RPS4Y1P22090 263 aaKnown RBP6.18□□□□□ -1.42
UPF3B-205ENST00000636792 ELAVL4P26378 380 aaKnown RBP6.18□□□□□ -1.42
UPF3B-205ENST00000636792 GABRA3P34903 492 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 PCGF2P35227 344 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 CPOXP36551 454 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 CYB561P49447 251 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 CLK3P49761 638 aaKnown RBP6.18□□□□□ -1.42
UPF3B-205ENST00000636792 NR0B1P51843 470 aaKnown RBP6.18□□□□□ -1.42
UPF3B-205ENST00000636792 SLC7A2P52569 658 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 SUMO3P55854 103 aaPredicted RBP6.18□□□□□ -1.42
UPF3B-205ENST00000636792 PCBP3P57721 371 aaKnown RBP6.18□□□□□ -1.42
UPF3B-205ENST00000636792 FOXL2P58012 376 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 MTPNP58546 118 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 PSME3P61289 254 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 CXADRP78310 365 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 CDK6Q00534 326 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 SRSF6Q13247 344 aaKnown RBP6.18□□□□□ -1.42
UPF3B-205ENST00000636792 VMACQ2NL98 169 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 DEFB109BQ30KR1 87 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 ZNF791Q3KP31 576 aaPredicted RBP6.18□□□□□ -1.42
UPF3B-205ENST00000636792 GTDC1Q4AE62 458 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 EIPR1Q53HC9 387 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.18□□□□□ -1.42
UPF3B-205ENST00000636792 ATP1A1-AS1Q5TC04 95 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 RNF220Q5VTB9 566 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 FAM69BQ5VUD6 431 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 REEP3Q6NUK4 255 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 RPUSD3Q6P087 351 aaKnown RBP6.18□□□□□ -1.42
UPF3B-205ENST00000636792 TNFAIP8L2Q6P589 184 aaPredicted RBP6.18□□□□□ -1.42
UPF3B-205ENST00000636792 NPSR1Q6W5P4 371 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 CCDC80Q76M96 950 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 PATL1Q86TB9 770 aaKnown RBP6.18□□□□□ -1.42
UPF3B-205ENST00000636792 SLC15A3Q8IY34 581 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 DEFB107AQ8IZN7 70 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 EID3Q8N140 333 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 CYP4Z2PQ8N1L4 340 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 ZNF619Q8N2I2 560 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 FBXW8Q8N3Y1 598 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 KIF2BQ8N4N8 673 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 ZADH2Q8N4Q0 377 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 TMEM156Q8N614 296 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 ZNF321PQ8N8H1 164 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 FAM98AQ8NCA5 519 aaKnown RBP6.18□□□□□ -1.42
UPF3B-205ENST00000636792 TOR1AIP2Q8NFQ8 470 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 OR2T12Q8NG77 320 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 SLC7A6OSQ96CW6 309 aaPredicted RBP6.18□□□□□ -1.42
UPF3B-205ENST00000636792 ASB9Q96DX5 294 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 OMA1Q96E52 524 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 AURKBQ96GD4 344 aaPredicted RBP6.18□□□□□ -1.42
UPF3B-205ENST00000636792 MAGED4Q96JG8 741 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 COL21A1Q96P44 957 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 ZNF607Q96SK3 696 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 SDF2Q99470 211 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 UTP23Q9BRU9 249 aaKnown RBP6.18□□□□□ -1.42
UPF3B-205ENST00000636792 BTBD10Q9BSF8 475 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 SERHL2Q9H4I8 314 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 CPNE5Q9HCH3 593 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 SDHAF3Q9NRP4 125 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 UBQLN4Q9NRR5 601 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 TAS2R1Q9NYW7 299 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 SLAMF8Q9P0V8 285 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 DTX4Q9Y2E6 619 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 KLF13Q9Y2Y9 288 aaPredicted RBP6.18□□□□□ -1.42
UPF3B-205ENST00000636792 WDR45Q9Y484 360 aa6.18□□□□□ -1.42
UPF3B-205ENST00000636792 IGF2RP11717 2491 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 TRAV17A0A0B4J275 112 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 ALG1L2C9J202 215 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 NPIPB9F8W1W9 429 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 NME4O00746 187 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 SCDO00767 359 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 PRKNO60260 465 aaPredicted RBP6.17□□□□□ -1.42
UPF3B-205ENST00000636792 GMNNO75496 209 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 REM1O75628 298 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 SERPINB7O75635 380 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 DNAJC8O75937 253 aaPredicted RBP6.17□□□□□ -1.42
UPF3B-205ENST00000636792 DNAJB5O75953 348 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 OR2J2O76002 312 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms