RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 MNX1P50219 401 aaPredicted RBP5.73□□□□□ -1.49
SCN1A-212ENST00000636194 CLCN2P51788 898 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 FMO1Q01740 532 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 RTL8BQ17RB0 113 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 MPEG1Q2M385 716 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 FRG2Q64ET8 278 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 OTOP2Q7RTS6 562 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 TMEM135Q86UB9 458 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 SCRN2Q96FV2 425 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 TCTN2Q96GX1 697 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 FRG2BQ96QU4 278 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 CRISPLD2Q9H0B8 497 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 TESQ9UGI8 421 aaKnown RBP5.73□□□□□ -1.49
SCN1A-212ENST00000636194 ANKRD26Q9UPS8 1709 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 PLCE1Q9P212 2302 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 TSPAN11A1L157 253 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 SORBS2O94875 1100 aaKnown RBP5.72□□□□□ -1.49
SCN1A-212ENST00000636194 CSF1P09603 554 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 CBLP22681 906 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 IL2RGP31785 369 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 RPS15AP62244 130 aaKnown RBP5.72□□□□□ -1.49
SCN1A-212ENST00000636194 IL10RBQ08334 325 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 C3orf38Q5JPI3 329 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 CFAP77Q6ZQR2 320 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 OR1J4Q8NGS1 313 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 AENQ8WTP8 325 aaKnown RBP5.72□□□□□ -1.49
SCN1A-212ENST00000636194 SENP5Q96HI0 755 aaPredicted RBP5.72□□□□□ -1.49
SCN1A-212ENST00000636194 MICU1Q9BPX6 476 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 IER2Q9BTL4 223 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 CPNE5Q9HCH3 593 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 TET1Q8NFU7 2136 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 TTC24A2A3L6 582 aaPredicted RBP5.72□□□□□ -1.49
SCN1A-212ENST00000636194 FAM24AA6NFZ4 105 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 A6NIN4 97 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 MSTNO14793 375 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 CBX7O95931 251 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 LCATP04180 440 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 ACP5P13686 325 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 HLCSP50747 726 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 PRAMEF8Q5VWM4 474 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 PRAMEF7Q5VXH5 474 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 STEAP1BQ6NZ63 245 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 VWA1Q6PCB0 445 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 MAMSTRQ6ZN01 415 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 SSX7Q7RTT5 188 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 THOC6Q86W42 341 aaKnown RBP5.72□□□□□ -1.49
SCN1A-212ENST00000636194 SLCO2A1Q92959 643 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 RAB18Q9NP72 206 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 ASF1BQ9NVP2 202 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 FAM120CQ9NX05 1096 aaKnown RBP5.72□□□□□ -1.49
SCN1A-212ENST00000636194 A0A0U1RQJ8 604 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 CDRT1O95170 752 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 MMP8P22894 467 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 IMPA1P29218 277 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 RPS5P46782 204 aaKnown RBP5.72□□□□□ -1.49
SCN1A-212ENST00000636194 ARSFP54793 590 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 FXYD4P59646 89 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 BST1Q10588 318 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 DUOXA1Q1HG43 343 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 CLEC12BQ2HXU8 276 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 IQSEC2Q5JU85 1478 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 LARP4Q71RC2 724 aaKnown RBP eCLIP5.72□□□□□ -1.49
SCN1A-212ENST00000636194 SERINC5Q86VE9 423 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 ACBD7Q8N6N7 88 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 KATNB1Q9BVA0 655 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 ACP6Q9NPH0 428 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 PIGVQ9NUD9 493 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 CD84Q9UIB8 345 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 SALL3Q9BXA9 1300 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 FAM237AA0A1B0GTK4 181 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 ZNF736B4DX44 427 aaPredicted RBP5.72□□□□□ -1.49
SCN1A-212ENST00000636194 LIASO43766 372 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 EGFP01133 1207 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 SERPINA5P05154 406 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 KLK1P06870 262 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 IL7P13232 177 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 RAB3AP20336 220 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 ITGB8P26012 769 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 AOAHP28039 575 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 CRABP1P29762 137 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 ECI1P42126 302 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 SLC6A8P48029 635 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 UBE2MP61081 183 aaKnown RBP5.72□□□□□ -1.49
SCN1A-212ENST00000636194 UBE2G1P62253 170 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 OPCMLQ14982 345 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 TSTD2Q5T7W7 516 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 RFWD3Q6PCD5 774 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 Q6ZRG5 221 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 HSD17B13Q7Z5P4 300 aaPredicted RBP5.72□□□□□ -1.49
SCN1A-212ENST00000636194 OR13C8Q8NGS7 320 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 JPH3Q8WXH2 748 aaPredicted RBP5.72□□□□□ -1.49
SCN1A-212ENST00000636194 SLC41A2Q96JW4 573 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 ZNF331Q9NQX6 463 aaPredicted RBP5.72□□□□□ -1.49
SCN1A-212ENST00000636194 FAM212BQ9NTI7 297 aaPredicted RBP5.72□□□□□ -1.49
SCN1A-212ENST00000636194 MYEF2Q9P2K5 600 aaKnown RBP5.72□□□□□ -1.49
SCN1A-212ENST00000636194 B4GALT6Q9UBX8 382 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 GPR34Q9UPC5 381 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 AKAP12Q02952 1782 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 TCRBV9S1A1TA0A576 114 aa5.72□□□□□ -1.49
SCN1A-212ENST00000636194 PRSS44E7EML9 344 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms