RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 NPTNQ9Y639 398 aa13.86□□□□□ -0.19
CACNA1A-220ENST00000635988 LEFTY2O00292 366 aa13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 SSNA1O43805 119 aa13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 TMPRSS11DO60235 418 aa13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 ALPPL2P10696 532 aa13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 TAS2R43P59537 309 aa13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 CRHR2Q13324 411 aa13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 ZNF620Q6ZNG0 422 aa13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 SIRT6Q8N6T7 355 aa13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 ANKRD53Q8N9V6 530 aa13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 SRFBP1Q8NEF9 429 aaKnown RBP13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 OR51G2Q8NGK0 314 aa13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 OR5W2Q8NH69 310 aa13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 YIPF5Q969M3 257 aa13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 DACT3Q96B18 629 aaPredicted RBP13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 MOAP1Q96BY2 351 aa13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 LINC00615Q96LM1 132 aaPredicted RBP13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 FAIM2Q9BWQ8 316 aa13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 KRCC1Q9NPI7 259 aaPredicted RBP13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 C12orf4Q9NQ89 552 aa13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 SLC35C2Q9NQQ7 365 aa13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 STARD7Q9NQZ5 370 aa13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 TEX10Q9NXF1 929 aaPredicted RBP13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 KLHL28Q9NXS3 571 aa13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 CALML5Q9NZT1 146 aa13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 KIF25Q9UIL4 384 aa13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 M0R233 179 aa13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 NDUFS4O43181 175 aa13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 ITGA10O75578 1167 aa13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 NDUFV2P19404 249 aa13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 LCN1P31025 176 aa13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 CAPZA2P47755 286 aa13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 ZNF157P51786 506 aaPredicted RBP13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 TAS2R38P59533 333 aa13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 SRP54P61011 504 aaKnown RBP13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 DYRK1AQ13627 763 aa13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 ASTLQ6HA08 431 aaPredicted RBP13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 ADCK2Q7Z695 626 aa13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 CPOQ8IVL8 374 aa13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 SIAH3Q8IW03 269 aa13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 BBS1Q8NFJ9 593 aa13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 GIMAP1Q8WWP7 306 aa13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 LRIG1Q96JA1 1093 aa13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 BBS4Q96RK4 519 aa13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 LINC00597Q9H2U6 94 aa13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 FN3KQ9H479 309 aa13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 LHX9Q9NQ69 397 aa13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 WASH6PQ9NQA3 447 aa13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 HINT3Q9NQE9 182 aaKnown RBP13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 TDP1Q9NUW8 608 aa13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 PCDH10Q9P2E7 1040 aa13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 MAFFQ9ULX9 164 aa13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 ASF1AQ9Y294 204 aa13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 TMEM5Q9Y2B1 443 aa13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 CSNK1G3Q9Y6M4 447 aa13.85□□□□□ -0.19
CACNA1A-220ENST00000635988 SLC9B1P1A6NJY1 282 aa13.84□□□□□ -0.19
CACNA1A-220ENST00000635988 CPSF4LA6NMK7 179 aaKnown RBP13.84□□□□□ -0.19
CACNA1A-220ENST00000635988 LRRN3E7EW58 273 aa13.84□□□□□ -0.19
CACNA1A-220ENST00000635988 DVL2O14641 736 aa13.84□□□□□ -0.19
CACNA1A-220ENST00000635988 PGRMC2O15173 223 aa13.84□□□□□ -0.19
CACNA1A-220ENST00000635988 PLPP2O43688 288 aa13.84□□□□□ -0.19
CACNA1A-220ENST00000635988 MT-ND5P03915 603 aa13.84□□□□□ -0.19
CACNA1A-220ENST00000635988 CCR8P51685 355 aa13.84□□□□□ -0.19
CACNA1A-220ENST00000635988 NCBP2P52298 156 aaKnown RBP eCLIP13.84□□□□□ -0.19
CACNA1A-220ENST00000635988 ARFIP1P53367 373 aa13.84□□□□□ -0.19
CACNA1A-220ENST00000635988 FUT5Q11128 374 aa13.84□□□□□ -0.19
CACNA1A-220ENST00000635988 ST3GAL2Q16842 350 aa13.84□□□□□ -0.19
CACNA1A-220ENST00000635988 GAREM2Q75VX8 874 aa13.84□□□□□ -0.19
CACNA1A-220ENST00000635988 OR56A1Q8NGH5 318 aa13.84□□□□□ -0.19
CACNA1A-220ENST00000635988 ZNF578Q96N58 590 aaPredicted RBP13.84□□□□□ -0.19
CACNA1A-220ENST00000635988 IL17FQ96PD4 163 aa13.84□□□□□ -0.19
CACNA1A-220ENST00000635988 ZDHHC5Q9C0B5 715 aa13.84□□□□□ -0.19
CACNA1A-220ENST00000635988 PCBD2Q9H0N5 130 aa13.84□□□□□ -0.19
CACNA1A-220ENST00000635988 OR2AG1Q9H205 316 aa13.84□□□□□ -0.19
CACNA1A-220ENST00000635988 LRRN3Q9H3W5 708 aa13.84□□□□□ -0.19
CACNA1A-220ENST00000635988 SAGE1Q9NXZ1 904 aa13.84□□□□□ -0.19
CACNA1A-220ENST00000635988 RABL2AQ9UBK7 228 aaPredicted RBP13.84□□□□□ -0.19
CACNA1A-220ENST00000635988 A0A1W2PPL8 197 aa13.84□□□□□ -0.19
CACNA1A-220ENST00000635988 DAPL1A0PJW8 107 aa13.84□□□□□ -0.19
CACNA1A-220ENST00000635988 SOCS6O14544 535 aa13.84□□□□□ -0.19
CACNA1A-220ENST00000635988 KLF4O43474 513 aa13.84□□□□□ -0.19
CACNA1A-220ENST00000635988 PRAF2O60831 178 aa13.84□□□□□ -0.19
CACNA1A-220ENST00000635988 SSTR2P30874 369 aa13.84□□□□□ -0.19
CACNA1A-220ENST00000635988 PRKAG1P54619 331 aa13.84□□□□□ -0.19
CACNA1A-220ENST00000635988 GPNMBQ14956 572 aa13.84□□□□□ -0.19
CACNA1A-220ENST00000635988 ARHGAP19Q14CB8 494 aa13.84□□□□□ -0.19
CACNA1A-220ENST00000635988 MBOAT2Q6ZWT7 520 aa13.84□□□□□ -0.19
CACNA1A-220ENST00000635988 OLIG3Q7RTU3 272 aa13.84□□□□□ -0.19
CACNA1A-220ENST00000635988 SLITRK4Q8IW52 837 aa13.84□□□□□ -0.19
CACNA1A-220ENST00000635988 DTX3Q8N9I9 347 aa13.84□□□□□ -0.19
CACNA1A-220ENST00000635988 TEX19Q8NA77 164 aa13.84□□□□□ -0.19
CACNA1A-220ENST00000635988 UXS1Q8NBZ7 420 aa13.84□□□□□ -0.19
CACNA1A-220ENST00000635988 CEP76Q8TAP6 659 aa13.84□□□□□ -0.19
CACNA1A-220ENST00000635988 NDC1Q9BTX1 674 aa13.84□□□□□ -0.19
CACNA1A-220ENST00000635988 ZNF436Q9C0F3 470 aaPredicted RBP13.84□□□□□ -0.19
CACNA1A-220ENST00000635988 SPRTNQ9H040 489 aaPredicted RBP13.84□□□□□ -0.19
CACNA1A-220ENST00000635988 RDH8Q9NYR8 311 aa13.84□□□□□ -0.19
CACNA1A-220ENST00000635988 ABRACLQ9P1F3 81 aa13.84□□□□□ -0.19
CACNA1A-220ENST00000635988 IL36AQ9UHA7 158 aa13.84□□□□□ -0.19
CACNA1A-220ENST00000635988 TAC3Q9UHF0 121 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms