RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 RBMS1P29558 406 aaKnown RBP4.48□□□□□ -1.69
SDCBP-213ENST00000630925 SSTR1P30872 391 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 ARRB2P32121 409 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 EIF2S3P41091 472 aaKnown RBP4.48□□□□□ -1.69
SDCBP-213ENST00000630925 PPP3CCP48454 512 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 KPNA2P52292 529 aaKnown RBP4.48□□□□□ -1.69
SDCBP-213ENST00000630925 PSME3P61289 254 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 MYL7Q01449 175 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 RAD51Q06609 339 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 KLC1Q07866 573 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 TBR1Q16650 682 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 MTX3Q5HYI7 312 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 RABL3Q5HYI8 236 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 LAIR1Q6GTX8 287 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.48□□□□□ -1.69
SDCBP-213ENST00000630925 C3P1Q6ZMU1 363 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 CENPUQ71F23 418 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 H2BFWTQ7Z2G1 175 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 PARGQ86W56 976 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 SLC35F3Q8IY50 421 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 TDHQ8IZJ6 230 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 HS3ST5Q8IZT8 346 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 CFAP52Q8N1V2 620 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 SYS1Q8N2H4 156 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 LNX2Q8N448 690 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 MFSD4AQ8N468 514 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 C8orf31Q8N9H6 132 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 CCDC71LQ8N9Z2 235 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 KYQ8NBH2 561 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 B3GNT7Q8NFL0 401 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 OR52L2PQ8NGH6 319 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 WDR36Q8NI36 951 aaKnown RBP4.48□□□□□ -1.69
SDCBP-213ENST00000630925 TMEM239Q8WW34 195 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 DACT3Q96B18 629 aaPredicted RBP4.48□□□□□ -1.69
SDCBP-213ENST00000630925 SH3YL1Q96HL8 342 aaPredicted RBP4.48□□□□□ -1.69
SDCBP-213ENST00000630925 ZFP42Q96MM3 310 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 PRAP1Q96NZ9 151 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 SERPINB11Q96P15 392 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 FUCA2Q9BTY2 467 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 DUSP26Q9BV47 211 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 COL25A1Q9BXS0 654 aaPredicted RBP4.48□□□□□ -1.69
SDCBP-213ENST00000630925 GSDMCQ9BYG8 508 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 ACTL8Q9H568 366 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 SAP30LQ9HAJ7 183 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 ACOXLQ9NUZ1 547 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 ZNF446Q9NWS9 450 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 USE1Q9NZ43 259 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 FAM30AQ9NZY2 134 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.48□□□□□ -1.69
SDCBP-213ENST00000630925 ZFR2Q9UPR6 939 aaKnown RBP4.48□□□□□ -1.69
SDCBP-213ENST00000630925 YBX2Q9Y2T7 364 aaKnown RBP4.48□□□□□ -1.69
SDCBP-213ENST00000630925 RFX7Q2KHR2 1363 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 EMSYQ7Z589 1322 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 LRRC3CA6NJW4 275 aa4.47□□□□□ -1.69
SDCBP-213ENST00000630925 SMIM23A6NLE4 172 aa4.47□□□□□ -1.69
SDCBP-213ENST00000630925 ZNF487B1APH4 448 aa4.47□□□□□ -1.69
SDCBP-213ENST00000630925 CLDN5O00501 218 aa4.47□□□□□ -1.69
SDCBP-213ENST00000630925 DEAF1O75398 565 aaPredicted RBP4.47□□□□□ -1.69
SDCBP-213ENST00000630925 IL18BPO95998 194 aa4.47□□□□□ -1.69
SDCBP-213ENST00000630925 MOCS2O96007 188 aaPredicted RBP4.47□□□□□ -1.69
SDCBP-213ENST00000630925 SFTPBP07988 381 aa4.47□□□□□ -1.69
SDCBP-213ENST00000630925 F7P08709 466 aaPredicted RBP4.47□□□□□ -1.69
SDCBP-213ENST00000630925 XRCC1P18887 633 aaPredicted RBP4.47□□□□□ -1.69
SDCBP-213ENST00000630925 ME2P23368 584 aa4.47□□□□□ -1.69
SDCBP-213ENST00000630925 GLRA1P23415 457 aa4.47□□□□□ -1.69
SDCBP-213ENST00000630925 FCARP24071 287 aa4.47□□□□□ -1.69
SDCBP-213ENST00000630925 RPL10P27635 214 aaKnown RBP4.47□□□□□ -1.69
SDCBP-213ENST00000630925 CYLC1P35663 651 aaPredicted RBP4.47□□□□□ -1.69
SDCBP-213ENST00000630925 COILP38432 576 aaPredicted RBP4.47□□□□□ -1.69
SDCBP-213ENST00000630925 MAGEA6P43360 314 aa4.47□□□□□ -1.69
SDCBP-213ENST00000630925 RGS6P49758 472 aa4.47□□□□□ -1.69
SDCBP-213ENST00000630925 ERVK11-1P61568 191 aa4.47□□□□□ -1.69
SDCBP-213ENST00000630925 AQP6Q13520 282 aa4.47□□□□□ -1.69
SDCBP-213ENST00000630925 LY6KQ17RY6 165 aa4.47□□□□□ -1.69
SDCBP-213ENST00000630925 QRICH1Q2TAL8 776 aa4.47□□□□□ -1.69
SDCBP-213ENST00000630925 COX19Q49B96 90 aa4.47□□□□□ -1.69
SDCBP-213ENST00000630925 C1orf146Q5VVC0 180 aa4.47□□□□□ -1.69
SDCBP-213ENST00000630925 SLX4IPQ5VYV7 408 aa4.47□□□□□ -1.69
SDCBP-213ENST00000630925 TMEM200BQ69YZ2 307 aa4.47□□□□□ -1.69
SDCBP-213ENST00000630925 APOBEC3HQ6NTF7 200 aaKnown RBP4.47□□□□□ -1.69
SDCBP-213ENST00000630925 AADACL2Q6P093 401 aa4.47□□□□□ -1.69
SDCBP-213ENST00000630925 VWA1Q6PCB0 445 aa4.47□□□□□ -1.69
SDCBP-213ENST00000630925 CLEC14AQ86T13 490 aa4.47□□□□□ -1.69
SDCBP-213ENST00000630925 LHFPL3Q86UP9 236 aa4.47□□□□□ -1.69
SDCBP-213ENST00000630925 RANBP3LQ86VV4 465 aaPredicted RBP4.47□□□□□ -1.69
SDCBP-213ENST00000630925 FGFRL1Q8N441 504 aa4.47□□□□□ -1.69
SDCBP-213ENST00000630925 ACBD4Q8NC06 268 aa4.47□□□□□ -1.69
SDCBP-213ENST00000630925 OR2D3Q8NGH3 330 aa4.47□□□□□ -1.69
SDCBP-213ENST00000630925 OR10Q1Q8NGQ4 319 aa4.47□□□□□ -1.69
SDCBP-213ENST00000630925 VANGL1Q8TAA9 524 aaPredicted RBP4.47□□□□□ -1.69
SDCBP-213ENST00000630925 TCP10LQ8TDR4 215 aa4.47□□□□□ -1.69
SDCBP-213ENST00000630925 TMEM170AQ8WVE7 144 aa4.47□□□□□ -1.69
SDCBP-213ENST00000630925 NELFBQ8WX92 580 aa4.47□□□□□ -1.69
SDCBP-213ENST00000630925 IRF7Q92985 503 aa4.47□□□□□ -1.69
SDCBP-213ENST00000630925 FAM131CQ96AQ9 280 aa4.47□□□□□ -1.69
SDCBP-213ENST00000630925 CTHRC1Q96CG8 243 aa4.47□□□□□ -1.69
SDCBP-213ENST00000630925 CMTM5Q96DZ9 223 aa4.47□□□□□ -1.69
SDCBP-213ENST00000630925 HPDLQ96IR7 371 aa4.47□□□□□ -1.69
SDCBP-213ENST00000630925 HSPA12BQ96MM6 686 aa4.47□□□□□ -1.69
SDCBP-213ENST00000630925 VSTM2LQ96N03 204 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms