RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 FAM74A3Q4VXF1 159 aa3.12□□□□□ -1.91
CDR1-202ENST00000625883 CELF3Q5SZQ8 465 aaKnown RBP3.12□□□□□ -1.91
CDR1-202ENST00000625883 FAM120AOSQ5T036 256 aa3.12□□□□□ -1.91
CDR1-202ENST00000625883 ANKRD37Q7Z713 158 aa3.12□□□□□ -1.91
CDR1-202ENST00000625883 CDC20BQ86Y33 519 aa3.12□□□□□ -1.91
CDR1-202ENST00000625883 BPIFB2Q8N4F0 458 aa3.12□□□□□ -1.91
CDR1-202ENST00000625883 ZNF540Q8NDQ6 660 aa3.12□□□□□ -1.91
CDR1-202ENST00000625883 M1APQ8TC57 530 aa3.12□□□□□ -1.91
CDR1-202ENST00000625883 GTSF1Q8WW33 167 aa3.12□□□□□ -1.91
CDR1-202ENST00000625883 PPP1R16AQ96I34 528 aa3.12□□□□□ -1.91
CDR1-202ENST00000625883 AKR1E2Q96JD6 320 aa3.12□□□□□ -1.91
CDR1-202ENST00000625883 NFKBIZQ9BYH8 718 aa3.12□□□□□ -1.91
CDR1-202ENST00000625883 RAB33BQ9H082 229 aa3.12□□□□□ -1.91
CDR1-202ENST00000625883 MEAF6Q9HAF1 191 aa3.12□□□□□ -1.91
CDR1-202ENST00000625883 PALMDQ9NP74 551 aa3.12□□□□□ -1.91
CDR1-202ENST00000625883 CYTH4Q9UIA0 394 aa3.12□□□□□ -1.91
CDR1-202ENST00000625883 GMPPBQ9Y5P6 360 aa3.12□□□□□ -1.91
CDR1-202ENST00000625883 HCFC1P51610 2035 aa3.12□□□□□ -1.91
CDR1-202ENST00000625883 POGZQ7Z3K3 1410 aa3.12□□□□□ -1.91
CDR1-202ENST00000625883 FRG2CA6NGY1 282 aa3.11□□□□□ -1.91
CDR1-202ENST00000625883 A8MX80 341 aa3.11□□□□□ -1.91
CDR1-202ENST00000625883 FAM220BPB1ANY3 271 aa3.11□□□□□ -1.91
CDR1-202ENST00000625883 CLDN5O00501 218 aa3.11□□□□□ -1.91
CDR1-202ENST00000625883 SLC35E2P0CK97 266 aa3.11□□□□□ -1.91
CDR1-202ENST00000625883 BCKDHAP12694 445 aa3.11□□□□□ -1.91
CDR1-202ENST00000625883 H2AFXP16104 143 aaPredicted RBP3.11□□□□□ -1.91
CDR1-202ENST00000625883 PTBP1P26599 531 aaKnown RBP eCLIP3.11□□□□□ -1.91
CDR1-202ENST00000625883 IL2RGP31785 369 aa3.11□□□□□ -1.91
CDR1-202ENST00000625883 CA8P35219 290 aa3.11□□□□□ -1.91
CDR1-202ENST00000625883 MAGEA5P43359 124 aa3.11□□□□□ -1.91
CDR1-202ENST00000625883 RPL34P49207 117 aaKnown RBP3.11□□□□□ -1.91
CDR1-202ENST00000625883 NOVA1P51513 510 aaKnown RBP3.11□□□□□ -1.91
CDR1-202ENST00000625883 RPL8P62917 257 aaKnown RBP3.11□□□□□ -1.91
CDR1-202ENST00000625883 CXCL6P80162 114 aa3.11□□□□□ -1.91
CDR1-202ENST00000625883 NUCB2P80303 420 aa3.11□□□□□ -1.91
CDR1-202ENST00000625883 SNTB2Q13425 540 aaKnown RBP3.11□□□□□ -1.91
CDR1-202ENST00000625883 PEX6Q13608 980 aa3.11□□□□□ -1.91
CDR1-202ENST00000625883 TGIF1Q15583 401 aa3.11□□□□□ -1.91
CDR1-202ENST00000625883 MAPK6Q16659 721 aa3.11□□□□□ -1.91
CDR1-202ENST00000625883 CYP51A1Q16850 503 aa3.11□□□□□ -1.91
CDR1-202ENST00000625883 CES3Q6UWW8 571 aa3.11□□□□□ -1.91
CDR1-202ENST00000625883 DPY19L4Q7Z388 723 aa3.11□□□□□ -1.91
CDR1-202ENST00000625883 HPS6Q86YV9 775 aa3.11□□□□□ -1.91
CDR1-202ENST00000625883 HSCBQ8IWL3 235 aa3.11□□□□□ -1.91
CDR1-202ENST00000625883 Q8N9G6 341 aaPredicted RBP3.11□□□□□ -1.91
CDR1-202ENST00000625883 GMCL1P1Q8NEA9 526 aa3.11□□□□□ -1.91
CDR1-202ENST00000625883 IPMKQ8NFU5 416 aa3.11□□□□□ -1.91
CDR1-202ENST00000625883 THRSPQ92748 146 aa3.11□□□□□ -1.91
CDR1-202ENST00000625883 SLC30A2Q9BRI3 323 aa3.11□□□□□ -1.91
CDR1-202ENST00000625883 PYGO2Q9BRQ0 406 aa3.11□□□□□ -1.91
CDR1-202ENST00000625883 RIBC2Q9H4K1 309 aa3.11□□□□□ -1.91
CDR1-202ENST00000625883 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.11□□□□□ -1.91
CDR1-202ENST00000625883 EHFQ9NZC4 300 aa3.11□□□□□ -1.91
CDR1-202ENST00000625883 ANAPC7Q9UJX3 599 aa3.11□□□□□ -1.91
CDR1-202ENST00000625883 SMC3Q9UQE7 1217 aa3.11□□□□□ -1.91
CDR1-202ENST00000625883 PPIAL4CA0A0B4J2A2 164 aa3.1□□□□□ -1.91
CDR1-202ENST00000625883 IGHV3-35A0A0C4DH35 117 aa3.1□□□□□ -1.91
CDR1-202ENST00000625883 STX7O15400 261 aaKnown RBP3.1□□□□□ -1.91
CDR1-202ENST00000625883 LATO43561 262 aa3.1□□□□□ -1.91
CDR1-202ENST00000625883 IDH1O75874 414 aaKnown RBP3.1□□□□□ -1.91
CDR1-202ENST00000625883 TM7SF2O76062 418 aa3.1□□□□□ -1.91
CDR1-202ENST00000625883 B3GAT3O94766 335 aa3.1□□□□□ -1.91
CDR1-202ENST00000625883 IGF1P05019 195 aa3.1□□□□□ -1.91
CDR1-202ENST00000625883 PPIAL4GP0DN37 164 aa3.1□□□□□ -1.91
CDR1-202ENST00000625883 CLUP10909 449 aa3.1□□□□□ -1.91
CDR1-202ENST00000625883 HNRNPA2B1P22626 353 aaKnown RBP3.1□□□□□ -1.91
CDR1-202ENST00000625883 ADSSP30520 456 aa3.1□□□□□ -1.91
CDR1-202ENST00000625883 CDH5P33151 784 aaPredicted RBP3.1□□□□□ -1.91
CDR1-202ENST00000625883 MAGEA9P43362 315 aa3.1□□□□□ -1.91
CDR1-202ENST00000625883 BDKRB1P46663 353 aa3.1□□□□□ -1.91
CDR1-202ENST00000625883 ZNF154Q13106 437 aa3.1□□□□□ -1.91
CDR1-202ENST00000625883 ATXN7L3Q14CW9 347 aaPredicted RBP3.1□□□□□ -1.91
CDR1-202ENST00000625883 CCDC57Q2TAC2 916 aa3.1□□□□□ -1.91
CDR1-202ENST00000625883 SLC36A3Q495N2 470 aa3.1□□□□□ -1.91
CDR1-202ENST00000625883 NADK2Q4G0N4 442 aa3.1□□□□□ -1.91
CDR1-202ENST00000625883 MEDAGQ5VYS4 303 aa3.1□□□□□ -1.91
CDR1-202ENST00000625883 PVRIGQ6DKI7 326 aa3.1□□□□□ -1.91
CDR1-202ENST00000625883 CGB2Q6NT52 195 aa3.1□□□□□ -1.91
CDR1-202ENST00000625883 UFSP1Q6NVU6 142 aa3.1□□□□□ -1.91
CDR1-202ENST00000625883 ZNF774Q6NX45 483 aa3.1□□□□□ -1.91
CDR1-202ENST00000625883 IFNEQ86WN2 208 aa3.1□□□□□ -1.91
CDR1-202ENST00000625883 MARCH9Q86YJ5 346 aa3.1□□□□□ -1.91
CDR1-202ENST00000625883 ZDHHC21Q8IVQ6 265 aa3.1□□□□□ -1.91
CDR1-202ENST00000625883 SLC39A11Q8N1S5 342 aa3.1□□□□□ -1.91
CDR1-202ENST00000625883 LINC01561Q8N1V8 128 aa3.1□□□□□ -1.91
CDR1-202ENST00000625883 KLHL30-AS1Q8NEE0 82 aa3.1□□□□□ -1.91
CDR1-202ENST00000625883 ARNTL2Q8WYA1 636 aa3.1□□□□□ -1.91
CDR1-202ENST00000625883 ANKRD9Q96BM1 317 aaPredicted RBP3.1□□□□□ -1.91
CDR1-202ENST00000625883 RPS10P5Q9NQ39 176 aa3.1□□□□□ -1.91
CDR1-202ENST00000625883 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.1□□□□□ -1.91
CDR1-202ENST00000625883 FARSBQ9NSD9 589 aaKnown RBP3.1□□□□□ -1.91
CDR1-202ENST00000625883 MRPL39Q9NYK5 338 aaKnown RBP3.1□□□□□ -1.91
CDR1-202ENST00000625883 USP16Q9Y5T5 823 aa3.1□□□□□ -1.91
CDR1-202ENST00000625883 USP6P35125 1406 aa3.1□□□□□ -1.91
CDR1-202ENST00000625883 SAGE2PA6NJ88 616 aa3.09□□□□□ -1.91
CDR1-202ENST00000625883 CDX4O14627 284 aaPredicted RBP3.09□□□□□ -1.91
CDR1-202ENST00000625883 XPO1O14980 1071 aaKnown RBP3.09□□□□□ -1.91
CDR1-202ENST00000625883 OR1F1O43749 312 aa3.09□□□□□ -1.91
CDR1-202ENST00000625883 CPN1P15169 458 aa3.09□□□□□ -1.91
CDR1-202ENST00000625883 PGAM2P15259 253 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms