RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 WIPI1Q5MNZ9 446 aaPredicted RBP11.3□□□□□ -0.6
LINC00963-217ENST00000624009 EEF1A1P5Q5VTE0 462 aa11.3□□□□□ -0.6
LINC00963-217ENST00000624009 AP1ARQ63HQ0 302 aa11.3□□□□□ -0.6
LINC00963-217ENST00000624009 CDC73Q6P1J9 531 aa11.3□□□□□ -0.6
LINC00963-217ENST00000624009 GDF7Q7Z4P5 450 aa11.3□□□□□ -0.6
LINC00963-217ENST00000624009 KRTCAP2Q8N6L1 136 aa11.3□□□□□ -0.6
LINC00963-217ENST00000624009 SLC16A11Q8NCK7 471 aa11.3□□□□□ -0.6
LINC00963-217ENST00000624009 VPS37AQ8NEZ2 397 aa11.3□□□□□ -0.6
LINC00963-217ENST00000624009 OR4K17Q8NGC6 315 aa11.3□□□□□ -0.6
LINC00963-217ENST00000624009 OR10Q1Q8NGQ4 319 aa11.3□□□□□ -0.6
LINC00963-217ENST00000624009 MBD3L2Q8NHZ7 208 aaPredicted RBP11.3□□□□□ -0.6
LINC00963-217ENST00000624009 OIT3Q8WWZ8 545 aa11.3□□□□□ -0.6
LINC00963-217ENST00000624009 C14orf79Q96F83 325 aa11.3□□□□□ -0.6
LINC00963-217ENST00000624009 RMND5BQ96G75 393 aaPredicted RBP11.3□□□□□ -0.6
LINC00963-217ENST00000624009 BTBD2Q9BX70 525 aa11.3□□□□□ -0.6
LINC00963-217ENST00000624009 ACTRT3Q9BYD9 372 aa11.3□□□□□ -0.6
LINC00963-217ENST00000624009 TBL1XR1Q9BZK7 514 aa11.3□□□□□ -0.6
LINC00963-217ENST00000624009 HOXD1Q9GZZ0 328 aa11.3□□□□□ -0.6
LINC00963-217ENST00000624009 PIGUQ9H490 435 aa11.3□□□□□ -0.6
LINC00963-217ENST00000624009 EQTNQ9NQ60 294 aa11.3□□□□□ -0.6
LINC00963-217ENST00000624009 UBQLN4Q9NRR5 601 aa11.3□□□□□ -0.6
LINC00963-217ENST00000624009 TNFRSF10DQ9UBN6 386 aa11.3□□□□□ -0.6
LINC00963-217ENST00000624009 Q9UFV3 132 aa11.3□□□□□ -0.6
LINC00963-217ENST00000624009 DKKL1Q9UK85 242 aa11.3□□□□□ -0.6
LINC00963-217ENST00000624009 FBXL2Q9UKC9 423 aa11.3□□□□□ -0.6
LINC00963-217ENST00000624009 SLC6A5Q9Y345 797 aa11.3□□□□□ -0.6
LINC00963-217ENST00000624009 DUXAA6NLW8 204 aa11.29□□□□□ -0.6
LINC00963-217ENST00000624009 DVL2O14641 736 aa11.29□□□□□ -0.6
LINC00963-217ENST00000624009 ANKRD28O15084 1053 aa11.29□□□□□ -0.6
LINC00963-217ENST00000624009 AK1P00568 194 aa11.29□□□□□ -0.6
LINC00963-217ENST00000624009 IL2RAP01589 272 aa11.29□□□□□ -0.6
LINC00963-217ENST00000624009 GUSBP08236 651 aa11.29□□□□□ -0.6
LINC00963-217ENST00000624009 ACP2P11117 423 aa11.29□□□□□ -0.6
LINC00963-217ENST00000624009 ZNF708P17019 499 aa11.29□□□□□ -0.6
LINC00963-217ENST00000624009 SSTR2P30874 369 aa11.29□□□□□ -0.6
LINC00963-217ENST00000624009 ADH7P40394 386 aa11.29□□□□□ -0.6
LINC00963-217ENST00000624009 KIR3DL1P43629 444 aa11.29□□□□□ -0.6
LINC00963-217ENST00000624009 LHX2P50458 406 aa11.29□□□□□ -0.6
LINC00963-217ENST00000624009 DUSP5Q16690 384 aa11.29□□□□□ -0.6
LINC00963-217ENST00000624009 FBXL19-AS1Q494R0 122 aa11.29□□□□□ -0.6
LINC00963-217ENST00000624009 ANXA8L1Q5VT79 327 aa11.29□□□□□ -0.6
LINC00963-217ENST00000624009 SEM1Q6ZVN7 128 aa11.29□□□□□ -0.6
LINC00963-217ENST00000624009 MTERF4Q7Z6M4 381 aaKnown RBP11.29□□□□□ -0.6
LINC00963-217ENST00000624009 YRDCQ86U90 279 aaKnown RBP11.29□□□□□ -0.6
LINC00963-217ENST00000624009 COX18Q8N8Q8 333 aa11.29□□□□□ -0.6
LINC00963-217ENST00000624009 ANKRD42Q8N9B4 389 aa11.29□□□□□ -0.6
LINC00963-217ENST00000624009 OR2M3Q8NG83 312 aa11.29□□□□□ -0.6
LINC00963-217ENST00000624009 ACTRT2Q8TDY3 377 aa11.29□□□□□ -0.6
LINC00963-217ENST00000624009 SLC9A6Q92581 669 aa11.29□□□□□ -0.6
LINC00963-217ENST00000624009 C1GALT1C1Q96EU7 318 aa11.29□□□□□ -0.6
LINC00963-217ENST00000624009 TM9SF2Q99805 663 aa11.29□□□□□ -0.6
LINC00963-217ENST00000624009 PAIP2Q9BPZ3 127 aaKnown RBP11.29□□□□□ -0.6
LINC00963-217ENST00000624009 NUF2Q9BZD4 464 aa11.29□□□□□ -0.6
LINC00963-217ENST00000624009 TRIM8Q9BZR9 551 aa11.29□□□□□ -0.6
LINC00963-217ENST00000624009 DPY30Q9C005 99 aa11.29□□□□□ -0.6
LINC00963-217ENST00000624009 ACBD3Q9H3P7 528 aa11.29□□□□□ -0.6
LINC00963-217ENST00000624009 ZNF395Q9H8N7 513 aaPredicted RBP11.29□□□□□ -0.6
LINC00963-217ENST00000624009 GPATCH2Q9NW75 528 aa11.29□□□□□ -0.6
LINC00963-217ENST00000624009 ALKBH4Q9NXW9 302 aa11.29□□□□□ -0.6
LINC00963-217ENST00000624009 FOXD3Q9UJU5 478 aaPredicted RBP11.29□□□□□ -0.6
LINC00963-217ENST00000624009 FAF1Q9UNN5 650 aaPredicted RBP11.29□□□□□ -0.6
LINC00963-217ENST00000624009 CSMD2Q7Z408 3487 aa11.29□□□□□ -0.6
LINC00963-217ENST00000624009 A0A087WZY1 265 aa11.28□□□□□ -0.6
LINC00963-217ENST00000624009 PRSS51A0A1B0GVH4 220 aa11.28□□□□□ -0.6
LINC00963-217ENST00000624009 GXYLT2A0PJZ3 443 aa11.28□□□□□ -0.6
LINC00963-217ENST00000624009 C7orf72A4D263 438 aa11.28□□□□□ -0.6
LINC00963-217ENST00000624009 C2orf72A6NCS6 295 aa11.28□□□□□ -0.6
LINC00963-217ENST00000624009 B4DXG7 233 aa11.28□□□□□ -0.6
LINC00963-217ENST00000624009 C19orf84I3L1E1 186 aa11.28□□□□□ -0.6
LINC00963-217ENST00000624009 SCN2BO60939 215 aa11.28□□□□□ -0.6
LINC00963-217ENST00000624009 ANGPTL1O95841 491 aa11.28□□□□□ -0.6
LINC00963-217ENST00000624009 C6orf47O95873 294 aa11.28□□□□□ -0.6
LINC00963-217ENST00000624009 AGR2O95994 175 aa11.28□□□□□ -0.6
LINC00963-217ENST00000624009 IGKV1D-16P01601 117 aa11.28□□□□□ -0.6
LINC00963-217ENST00000624009 PEPDP12955 493 aa11.28□□□□□ -0.6
LINC00963-217ENST00000624009 ZNF17P17021 662 aa11.28□□□□□ -0.6
LINC00963-217ENST00000624009 PRKAG1P54619 331 aa11.28□□□□□ -0.6
LINC00963-217ENST00000624009 EEFSECP57772 596 aaKnown RBP11.28□□□□□ -0.6
LINC00963-217ENST00000624009 HBA1P69905 142 aa11.28□□□□□ -0.6
LINC00963-217ENST00000624009 POU6F2P78424 691 aaPredicted RBP11.28□□□□□ -0.6
LINC00963-217ENST00000624009 TXNL4AP83876 142 aaKnown RBP11.28□□□□□ -0.6
LINC00963-217ENST00000624009 LASP1Q14847 261 aaKnown RBP11.28□□□□□ -0.6
LINC00963-217ENST00000624009 GRAMD1BQ3KR37 738 aa11.28□□□□□ -0.6
LINC00963-217ENST00000624009 SZRD1Q7Z422 152 aa11.28□□□□□ -0.6
LINC00963-217ENST00000624009 SPATA19Q7Z5L4 167 aa11.28□□□□□ -0.6
LINC00963-217ENST00000624009 WDR53Q7Z5U6 358 aaPredicted RBP11.28□□□□□ -0.6
LINC00963-217ENST00000624009 CCDC71Q8IV32 467 aaPredicted RBP11.28□□□□□ -0.6
LINC00963-217ENST00000624009 MCEMP1Q8IX19 187 aa11.28□□□□□ -0.6
LINC00963-217ENST00000624009 GLB1L3Q8NCI6 653 aaPredicted RBP11.28□□□□□ -0.6
LINC00963-217ENST00000624009 MIPOL1Q8TD10 442 aa11.28□□□□□ -0.6
LINC00963-217ENST00000624009 PIK3R3Q92569 461 aa11.28□□□□□ -0.6
LINC00963-217ENST00000624009 WNT2BQ93097 391 aa11.28□□□□□ -0.6
LINC00963-217ENST00000624009 LRRC46Q96FV0 321 aa11.28□□□□□ -0.6
LINC00963-217ENST00000624009 MAELQ96JY0 434 aaKnown RBP11.28□□□□□ -0.6
LINC00963-217ENST00000624009 SFXN2Q96NB2 322 aa11.28□□□□□ -0.6
LINC00963-217ENST00000624009 PIGQQ9BRB3 760 aa11.28□□□□□ -0.6
LINC00963-217ENST00000624009 CXorf36Q9H7Y0 433 aa11.28□□□□□ -0.6
LINC00963-217ENST00000624009 MANSC1Q9H8J5 431 aa11.28□□□□□ -0.6
LINC00963-217ENST00000624009 VIPAS39Q9H9C1 493 aa11.28□□□□□ -0.6
LINC00963-217ENST00000624009 STOML1Q9UBI4 398 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms