RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 RNF180Q86T96 592 aa13.2□□□□□ -0.3
LDB3-209ENST00000623056 PCSK9Q8NBP7 692 aaKnown RBP13.2□□□□□ -0.3
LDB3-209ENST00000623056 C7orf57Q8NEG2 295 aa13.2□□□□□ -0.3
LDB3-209ENST00000623056 OR56B4Q8NH76 319 aa13.2□□□□□ -0.3
LDB3-209ENST00000623056 OSTF1Q92882 214 aa13.2□□□□□ -0.3
LDB3-209ENST00000623056 UBE2E3Q969T4 207 aa13.2□□□□□ -0.3
LDB3-209ENST00000623056 FBXW5Q969U6 566 aa13.2□□□□□ -0.3
LDB3-209ENST00000623056 ZFP3Q96NJ6 502 aa13.2□□□□□ -0.3
LDB3-209ENST00000623056 F2RL3Q96RI0 385 aa13.2□□□□□ -0.3
LDB3-209ENST00000623056 DDOQ99489 341 aa13.2□□□□□ -0.3
LDB3-209ENST00000623056 TIMP4Q99727 224 aa13.2□□□□□ -0.3
LDB3-209ENST00000623056 ALG8Q9BVK2 526 aa13.2□□□□□ -0.3
LDB3-209ENST00000623056 SHARPINQ9H0F6 387 aa13.2□□□□□ -0.3
LDB3-209ENST00000623056 AHSPQ9NZD4 102 aa13.2□□□□□ -0.3
LDB3-209ENST00000623056 IL20RAQ9UHF4 553 aa13.2□□□□□ -0.3
LDB3-209ENST00000623056 HS3ST2Q9Y278 367 aa13.2□□□□□ -0.3
LDB3-209ENST00000623056 PLXNA2O75051 1894 aa13.2□□□□□ -0.3
LDB3-209ENST00000623056 RB1P06400 928 aa13.19□□□□□ -0.3
LDB3-209ENST00000623056 DRD5P21918 477 aa13.19□□□□□ -0.3
LDB3-209ENST00000623056 F8A1P23610 371 aa13.19□□□□□ -0.3
LDB3-209ENST00000623056 BSGP35613 385 aa13.19□□□□□ -0.3
LDB3-209ENST00000623056 MMP15P51511 669 aa13.19□□□□□ -0.3
LDB3-209ENST00000623056 EPHA4P54764 986 aa13.19□□□□□ -0.3
LDB3-209ENST00000623056 POLR2LP62875 67 aaKnown RBP13.19□□□□□ -0.3
LDB3-209ENST00000623056 TMEM115Q12893 351 aaPredicted RBP13.19□□□□□ -0.3
LDB3-209ENST00000623056 PGGHGQ32M88 737 aa13.19□□□□□ -0.3
LDB3-209ENST00000623056 CDC73Q6P1J9 531 aa13.19□□□□□ -0.3
LDB3-209ENST00000623056 ARL9Q6T311 187 aa13.19□□□□□ -0.3
LDB3-209ENST00000623056 GDPD4Q6W3E5 623 aa13.19□□□□□ -0.3
LDB3-209ENST00000623056 Q6ZVU0 165 aa13.19□□□□□ -0.3
LDB3-209ENST00000623056 CPOQ8IVL8 374 aa13.19□□□□□ -0.3
LDB3-209ENST00000623056 CMIPQ8IY22 773 aa13.19□□□□□ -0.3
LDB3-209ENST00000623056 CPXM2Q8N436 756 aa13.19□□□□□ -0.3
LDB3-209ENST00000623056 OR52H1Q8NGJ2 320 aa13.19□□□□□ -0.3
LDB3-209ENST00000623056 OR9A1PQ8NGU1 263 aa13.19□□□□□ -0.3
LDB3-209ENST00000623056 OR51Q1Q8NH59 317 aa13.19□□□□□ -0.3
LDB3-209ENST00000623056 BBS10Q8TAM1 723 aa13.19□□□□□ -0.3
LDB3-209ENST00000623056 SFXN2Q96NB2 322 aa13.19□□□□□ -0.3
LDB3-209ENST00000623056 TBX5Q99593 518 aa13.19□□□□□ -0.3
LDB3-209ENST00000623056 SPATA5L1Q9BVQ7 753 aa13.19□□□□□ -0.3
LDB3-209ENST00000623056 TEX12Q9BXU0 123 aa13.19□□□□□ -0.3
LDB3-209ENST00000623056 HINT3Q9NQE9 182 aaKnown RBP13.19□□□□□ -0.3
LDB3-209ENST00000623056 SEMA4GQ9NTN9 838 aa13.19□□□□□ -0.3
LDB3-209ENST00000623056 OR6C2Q9NZP2 312 aa13.19□□□□□ -0.3
LDB3-209ENST00000623056 H2AFY2Q9P0M6 372 aaPredicted RBP13.19□□□□□ -0.3
LDB3-209ENST00000623056 MRPS7Q9Y2R9 242 aaKnown RBP13.19□□□□□ -0.3
LDB3-209ENST00000623056 FAM183AA6NL82 134 aa13.19□□□□□ -0.3
LDB3-209ENST00000623056 CPSF4LA6NMK7 179 aaKnown RBP13.19□□□□□ -0.3
LDB3-209ENST00000623056 FRS3O43559 492 aa13.19□□□□□ -0.3
LDB3-209ENST00000623056 UBL3O95164 117 aa13.19□□□□□ -0.3
LDB3-209ENST00000623056 WNT1P04628 370 aa13.19□□□□□ -0.3
LDB3-209ENST00000623056 FUT5Q11128 374 aa13.19□□□□□ -0.3
LDB3-209ENST00000623056 ZNF273Q14593 569 aa13.19□□□□□ -0.3
LDB3-209ENST00000623056 ZMYND11Q15326 602 aa13.19□□□□□ -0.3
LDB3-209ENST00000623056 SEZ6L2Q6UXD5 910 aa13.19□□□□□ -0.3
LDB3-209ENST00000623056 CFAP77Q6ZQR2 320 aa13.19□□□□□ -0.3
LDB3-209ENST00000623056 TPRA1Q86W33 373 aa13.19□□□□□ -0.3
LDB3-209ENST00000623056 PIGXQ8TBF5 258 aa13.19□□□□□ -0.3
LDB3-209ENST00000623056 GLYATL1Q969I3 302 aa13.19□□□□□ -0.3
LDB3-209ENST00000623056 FAIM2Q9BWQ8 316 aa13.19□□□□□ -0.3
LDB3-209ENST00000623056 ACTR6Q9GZN1 396 aa13.19□□□□□ -0.3
LDB3-209ENST00000623056 MS4A7Q9GZW8 240 aaPredicted RBP13.19□□□□□ -0.3
LDB3-209ENST00000623056 QRSL1Q9H0R6 528 aaKnown RBP13.19□□□□□ -0.3
LDB3-209ENST00000623056 C20orf85Q9H1P6 137 aa13.19□□□□□ -0.3
LDB3-209ENST00000623056 BCL2L10Q9HD36 194 aa13.19□□□□□ -0.3
LDB3-209ENST00000623056 MED17Q9NVC6 651 aa13.19□□□□□ -0.3
LDB3-209ENST00000623056 NKIRAS2Q9NYR9 191 aa13.19□□□□□ -0.3
LDB3-209ENST00000623056 ENTPD4Q9Y227 616 aa13.19□□□□□ -0.3
LDB3-209ENST00000623056 NUP210Q8TEM1 1887 aaPredicted RBP13.19□□□□□ -0.3
LDB3-209ENST00000623056 GLULP15104 373 aa13.18□□□□□ -0.3
LDB3-209ENST00000623056 GPR4P46093 362 aa13.18□□□□□ -0.3
LDB3-209ENST00000623056 CTAG1AP78358 180 aa13.18□□□□□ -0.3
LDB3-209ENST00000623056 SNTB2Q13425 540 aaKnown RBP13.18□□□□□ -0.3
LDB3-209ENST00000623056 TRAM2Q15035 370 aa13.18□□□□□ -0.3
LDB3-209ENST00000623056 TCTE1Q5JU00 501 aa13.18□□□□□ -0.3
LDB3-209ENST00000623056 PIP5KL1Q5T9C9 394 aa13.18□□□□□ -0.3
LDB3-209ENST00000623056 KHDRBS2Q5VWX1 349 aaKnown RBP13.18□□□□□ -0.3
LDB3-209ENST00000623056 MTFR2Q6P444 385 aa13.18□□□□□ -0.3
LDB3-209ENST00000623056 C3P1Q6ZMU1 363 aa13.18□□□□□ -0.3
LDB3-209ENST00000623056 RRM2BQ7LG56 351 aa13.18□□□□□ -0.3
LDB3-209ENST00000623056 CEACAM19Q7Z692 300 aa13.18□□□□□ -0.3
LDB3-209ENST00000623056 CFAP206Q8IYR0 622 aa13.18□□□□□ -0.3
LDB3-209ENST00000623056 SDR16C5Q8N3Y7 309 aa13.18□□□□□ -0.3
LDB3-209ENST00000623056 C2orf73Q8N5S3 287 aaPredicted RBP13.18□□□□□ -0.3
LDB3-209ENST00000623056 ACBD7Q8N6N7 88 aa13.18□□□□□ -0.3
LDB3-209ENST00000623056 TMEM99Q8N816 258 aa13.18□□□□□ -0.3
LDB3-209ENST00000623056 OR5W2Q8NH69 310 aa13.18□□□□□ -0.3
LDB3-209ENST00000623056 ZFPM2Q8WW38 1151 aa13.18□□□□□ -0.3
LDB3-209ENST00000623056 KLK6Q92876 244 aa13.18□□□□□ -0.3
LDB3-209ENST00000623056 CXorf58Q96LI9 332 aa13.18□□□□□ -0.3
LDB3-209ENST00000623056 C7orf50Q9BRJ6 194 aaKnown RBP13.18□□□□□ -0.3
LDB3-209ENST00000623056 YIPF4Q9BSR8 244 aa13.18□□□□□ -0.3
LDB3-209ENST00000623056 CHIAQ9BZP6 476 aa13.18□□□□□ -0.3
LDB3-209ENST00000623056 KLHL1Q9NR64 748 aa13.18□□□□□ -0.3
LDB3-209ENST00000623056 IL20Q9NYY1 176 aa13.18□□□□□ -0.3
LDB3-209ENST00000623056 RPS6KB2Q9UBS0 482 aa13.18□□□□□ -0.3
LDB3-209ENST00000623056 TRABD2BA6NFA1 517 aa13.18□□□□□ -0.3
LDB3-209ENST00000623056 LRRN3E7EW58 273 aa13.18□□□□□ -0.3
LDB3-209ENST00000623056 E9PI62 339 aa13.18□□□□□ -0.3
LDB3-209ENST00000623056 H3BUI4 141 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms