RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045	NDUFA9	Q16795	377 aa		13.48	□□□□□ -0.25
SYNRG-231	ENST00000622045	GSG1	Q2KHT4	349 aa		13.48	□□□□□ -0.25
SYNRG-231	ENST00000622045	CD200R1L	Q6Q8B3	271 aa		13.48	□□□□□ -0.25
SYNRG-231	ENST00000622045	C3P1	Q6ZMU1	363 aa		13.48	□□□□□ -0.25
SYNRG-231	ENST00000622045	C17orf64	Q86WR6	236 aa		13.48	□□□□□ -0.25
SYNRG-231	ENST00000622045	LINC00518	Q8N0U6	118 aa		13.48	□□□□□ -0.25
SYNRG-231	ENST00000622045	TRMT10A	Q8TBZ6	339 aa	Known RBP	13.48	□□□□□ -0.25
SYNRG-231	ENST00000622045	GCDH	Q92947	438 aa	Predicted RBP	13.48	□□□□□ -0.25
SYNRG-231	ENST00000622045	LYAR	Q9NX58	379 aa	Known RBP	13.48	□□□□□ -0.25
SYNRG-231	ENST00000622045	A4GNT	Q9UNA3	340 aa		13.48	□□□□□ -0.25
SYNRG-231	ENST00000622045	SIRT4	Q9Y6E7	314 aa	Predicted RBP	13.48	□□□□□ -0.25
SYNRG-231	ENST00000622045	ZC3H12D	A2A288	527 aa	Known RBP	13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045	PLPP1	O14494	284 aa		13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045	PQBP1	O60828	265 aa	Known RBP	13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045	ERAL1	O75616	437 aa	Known RBP	13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045	LPL	P06858	475 aa		13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045	ALPPL2	P10696	532 aa		13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045	HOXD10	P28358	340 aa		13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045	SREBF2	Q12772	1141 aa		13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045	RASGRP3	Q8IV61	690 aa		13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045	KLHL36	Q8N4N3	616 aa		13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045	FBXO15	Q8NCQ5	510 aa	Predicted RBP	13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045	OR51G2	Q8NGK0	314 aa		13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045	OR6T1	Q8NGN1	323 aa		13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045	OR10Z1	Q8NGY1	313 aa		13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045	APOBEC4	Q8WW27	367 aa	Known RBP	13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045	ZNF689	Q96CS4	500 aa	Predicted RBP	13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045	SLC35G5	Q96KT7	338 aa		13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045	ZNF436	Q9C0F3	470 aa	Predicted RBP	13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045	TAC3	Q9UHF0	121 aa		13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045	ASB4	Q9Y574	426 aa		13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045	FEZF1	A0PJY2	475 aa		13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045	IRGM	A1A4Y4	181 aa		13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045	ZNF593	O00488	134 aa	Predicted RBP	13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045	KLHL18	O94889	574 aa		13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045	SLC2A10	O95528	541 aa		13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045	GPR1	P46091	355 aa		13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045	SLC25A35	Q3KQZ1	300 aa		13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045	SLC36A2	Q495M3	483 aa		13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045	SHE	Q5VZ18	495 aa		13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045		Q6ZTK2	550 aa		13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045	TMCO2	Q7Z6W1	182 aa	Predicted RBP	13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045	REG4	Q9BYZ8	158 aa		13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045	OR10A4	Q9H209	315 aa		13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045	FGF20	Q9NP95	211 aa	Predicted RBP	13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045	WASH6P	Q9NQA3	447 aa		13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045	CSNK1G3	Q9Y6M4	447 aa		13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045	GLOD5	A6NK44	160 aa		13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045	POP7	O75817	140 aa	Known RBP	13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045	OLFM2	O95897	454 aa		13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045	LRRC28	Q86X40	367 aa	Predicted RBP	13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045	TCEAL8	Q8IYN2	117 aa		13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045	TTL	Q8NG68	377 aa		13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045	TM4SF18	Q96CE8	201 aa		13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045	SGPP1	Q9BX95	441 aa		13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045	TEX12	Q9BXU0	123 aa		13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045	DDX31	Q9H8H2	851 aa	Known RBP	13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045	CCL26	Q9Y258	94 aa		13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045	CHST2	Q9Y4C5	530 aa		13.47	□□□□□ -0.25
SYNRG-231	ENST00000622045		A0A1W2PRQ8	180 aa		13.46	□□□□□ -0.25
SYNRG-231	ENST00000622045	SLC9B1P1	A6NJY1	282 aa		13.46	□□□□□ -0.25
SYNRG-231	ENST00000622045		L7N2F9	121 aa		13.46	□□□□□ -0.25
SYNRG-231	ENST00000622045	SOX30	O94993	753 aa		13.46	□□□□□ -0.25
SYNRG-231	ENST00000622045	TF	P02787	698 aa		13.46	□□□□□ -0.25
SYNRG-231	ENST00000622045	RB1	P06400	928 aa		13.46	□□□□□ -0.25
SYNRG-231	ENST00000622045	SULT1A3	P0DMM9	295 aa		13.46	□□□□□ -0.25
SYNRG-231	ENST00000622045	SULT1A4	P0DMN0	295 aa		13.46	□□□□□ -0.25
SYNRG-231	ENST00000622045	PTBP1	P26599	531 aa	Known RBP eCLIP	13.46	□□□□□ -0.25
SYNRG-231	ENST00000622045	MAZ	P56270	477 aa	Known RBP	13.46	□□□□□ -0.25
SYNRG-231	ENST00000622045	SLC3A1	Q07837	685 aa		13.46	□□□□□ -0.25
SYNRG-231	ENST00000622045	BBS4	Q96RK4	519 aa		13.46	□□□□□ -0.25
SYNRG-231	ENST00000622045	ZCCHC2	Q9C0B9	1178 aa	Known RBP	13.46	□□□□□ -0.25
SYNRG-231	ENST00000622045	SHARPIN	Q9H0F6	387 aa		13.46	□□□□□ -0.25
SYNRG-231	ENST00000622045	TDP1	Q9NUW8	608 aa		13.46	□□□□□ -0.25
SYNRG-231	ENST00000622045	ICK	Q9UPZ9	632 aa		13.46	□□□□□ -0.25
SYNRG-231	ENST00000622045	DOCK6	Q96HP0	2047 aa		13.46	□□□□□ -0.25
SYNRG-231	ENST00000622045		A0A1B0GVI7	797 aa		13.46	□□□□□ -0.25
SYNRG-231	ENST00000622045	FAM170B	A6NMN3	283 aa		13.46	□□□□□ -0.25
SYNRG-231	ENST00000622045	FZD7	O75084	574 aa		13.46	□□□□□ -0.25
SYNRG-231	ENST00000622045	WNT1	P04628	370 aa		13.46	□□□□□ -0.25
SYNRG-231	ENST00000622045	MINDY4	Q4G0A6	757 aa		13.46	□□□□□ -0.25
SYNRG-231	ENST00000622045	EOGT	Q5NDL2	527 aa		13.46	□□□□□ -0.25
SYNRG-231	ENST00000622045	KHDRBS2	Q5VWX1	349 aa	Known RBP	13.46	□□□□□ -0.25
SYNRG-231	ENST00000622045	LRRTM4	Q86VH4	590 aa		13.46	□□□□□ -0.25
SYNRG-231	ENST00000622045	TBC1D19	Q8N5T2	526 aa		13.46	□□□□□ -0.25
SYNRG-231	ENST00000622045	RPLP0P6	Q8NHW5	317 aa		13.46	□□□□□ -0.25
SYNRG-231	ENST00000622045	ZNF558	Q96NG5	402 aa		13.46	□□□□□ -0.25
SYNRG-231	ENST00000622045	SEC22C	Q9BRL7	303 aa		13.46	□□□□□ -0.25
SYNRG-231	ENST00000622045	ORAI3	Q9BRQ5	295 aa		13.46	□□□□□ -0.25
SYNRG-231	ENST00000622045	SLC46A2	Q9BY10	475 aa		13.46	□□□□□ -0.25
SYNRG-231	ENST00000622045	GSDMC	Q9BYG8	508 aa		13.46	□□□□□ -0.25
SYNRG-231	ENST00000622045	TTYH1	Q9H313	450 aa	Predicted RBP	13.46	□□□□□ -0.25
SYNRG-231	ENST00000622045	PRR23D1	E9PI22	279 aa	Predicted RBP	13.46	□□□□□ -0.26
SYNRG-231	ENST00000622045		H7BY64	318 aa		13.46	□□□□□ -0.26
SYNRG-231	ENST00000622045	SOCS6	O14544	535 aa		13.46	□□□□□ -0.26
SYNRG-231	ENST00000622045	PRR23D2	P0DMB1	279 aa	Predicted RBP	13.46	□□□□□ -0.26
SYNRG-231	ENST00000622045	TYR	P14679	529 aa		13.46	□□□□□ -0.26
SYNRG-231	ENST00000622045	SIM1	P81133	766 aa	Predicted RBP	13.46	□□□□□ -0.26
SYNRG-231	ENST00000622045	NDUFAF5	Q5TEU4	345 aa		13.46	□□□□□ -0.26

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