RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 CRYZQ08257 329 aaKnown RBP6.54□□□□□ -1.36
NEDD9-216ENST00000620854 DHCR24Q15392 516 aa6.54□□□□□ -1.36
NEDD9-216ENST00000620854 MINDY4Q4G0A6 757 aa6.54□□□□□ -1.36
NEDD9-216ENST00000620854 MEDAGQ5VYS4 303 aa6.54□□□□□ -1.36
NEDD9-216ENST00000620854 FAM92BQ6ZTR7 304 aa6.54□□□□□ -1.36
NEDD9-216ENST00000620854 C9orf62Q8N4C0 152 aa6.54□□□□□ -1.36
NEDD9-216ENST00000620854 BMPERQ8N8U9 685 aa6.54□□□□□ -1.36
NEDD9-216ENST00000620854 CHST4Q8NCG5 386 aa6.54□□□□□ -1.36
NEDD9-216ENST00000620854 ANGPTL6Q8NI99 470 aa6.54□□□□□ -1.36
NEDD9-216ENST00000620854 BCL7CQ8WUZ0 217 aaPredicted RBP6.54□□□□□ -1.36
NEDD9-216ENST00000620854 AHCYL2Q96HN2 611 aaKnown RBP6.54□□□□□ -1.36
NEDD9-216ENST00000620854 FAM46AQ96IP4 442 aaKnown RBP6.54□□□□□ -1.36
NEDD9-216ENST00000620854 ZNF354BQ96LW1 612 aa6.54□□□□□ -1.36
NEDD9-216ENST00000620854 TREX2Q9BQ50 279 aaPredicted RBP6.54□□□□□ -1.36
NEDD9-216ENST00000620854 ZBP1Q9H171 429 aa6.54□□□□□ -1.36
NEDD9-216ENST00000620854 NIPAL2Q9H841 368 aa6.54□□□□□ -1.36
NEDD9-216ENST00000620854 TAAR2Q9P1P5 351 aa6.54□□□□□ -1.36
NEDD9-216ENST00000620854 MGAT4BQ9UQ53 548 aa6.54□□□□□ -1.36
NEDD9-216ENST00000620854 NTNG1Q9Y2I2 539 aa6.54□□□□□ -1.36
NEDD9-216ENST00000620854 DNAJC13O75165 2243 aa6.54□□□□□ -1.36
NEDD9-216ENST00000620854 NLRC5Q86WI3 1866 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 URADA6NGE7 173 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 GABRPO00591 440 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 CHP2O43745 196 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 SOCS5O75159 536 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 TRIM3O75382 744 aaPredicted RBP6.53□□□□□ -1.36
NEDD9-216ENST00000620854 KDM4BO94953 1096 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 RASGRP1O95267 797 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 CFDP00746 253 aaPredicted RBP6.53□□□□□ -1.36
NEDD9-216ENST00000620854 HMGA1P17096 107 aaKnown RBP6.53□□□□□ -1.36
NEDD9-216ENST00000620854 VIPR1P32241 457 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 CLCNKAP51800 687 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 STXBP1P61764 594 aaKnown RBP6.53□□□□□ -1.36
NEDD9-216ENST00000620854 SNRPGP62308 76 aaKnown RBP6.53□□□□□ -1.36
NEDD9-216ENST00000620854 ZNF155Q12901 538 aaPredicted RBP6.53□□□□□ -1.36
NEDD9-216ENST00000620854 TNK1Q13470 666 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 ODF4Q2M2E3 257 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 SFRP4Q6FHJ7 346 aaPredicted RBP6.53□□□□□ -1.36
NEDD9-216ENST00000620854 GRHL2Q6ISB3 625 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 RTL10Q7L3V2 364 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 AMZ2Q86W34 360 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 LSMEM1Q8N8F7 131 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 OR11H7Q8NGC8 314 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 GRHL3Q8TE85 626 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 SPRYD4Q8WW59 207 aaPredicted RBP6.53□□□□□ -1.36
NEDD9-216ENST00000620854 LCN9Q8WX39 176 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 GCDHQ92947 438 aaPredicted RBP6.53□□□□□ -1.36
NEDD9-216ENST00000620854 ZG16BQ96DA0 208 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 ATF6BQ99941 703 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 C17orf62Q9BQA9 187 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 EFCAB11Q9BUY7 163 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 GTPBP2Q9BX10 602 aaKnown RBP6.53□□□□□ -1.36
NEDD9-216ENST00000620854 BHLHE41Q9C0J9 482 aaPredicted RBP6.53□□□□□ -1.36
NEDD9-216ENST00000620854 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.53□□□□□ -1.36
NEDD9-216ENST00000620854 KCNN2Q9H2S1 579 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 MED20Q9H944 212 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 ISG20L2Q9H9L3 353 aaKnown RBP6.53□□□□□ -1.36
NEDD9-216ENST00000620854 STOML2Q9UJZ1 356 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 SCML1Q9UN30 329 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 CDH10Q9Y6N8 788 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 SCN8AQ9UQD0 1980 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 LOC285556D6RIA3 1793 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 IRGMA1A4Y4 181 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 MCIDASD6RGH6 385 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 H0YIV9 168 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 ZNF821O75541 412 aaPredicted RBP6.53□□□□□ -1.36
NEDD9-216ENST00000620854 DBIP07108 87 aaKnown RBP6.53□□□□□ -1.36
NEDD9-216ENST00000620854 LIMS3P0CW19 117 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 LIMS4P0CW20 117 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 NPPBP16860 134 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 ACVR1BP36896 505 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 GPR4P46093 362 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 LIMS1P48059 325 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 SLC6A11P48066 632 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 PXNP49023 591 aaPredicted RBP6.53□□□□□ -1.36
NEDD9-216ENST00000620854 MAZP56270 477 aaKnown RBP6.53□□□□□ -1.36
NEDD9-216ENST00000620854 PER3P56645 1201 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 CLDN20P56880 219 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 ADAM15Q13444 863 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 PRAMEF14Q5SWL7 426 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 PRAMEF13Q5VWM6 474 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 RPTNQ6XPR3 784 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 SLCO4C1Q6ZQN7 724 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 IDO2Q6ZQW0 420 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 PRSS45Q7RTY3 260 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 OAFQ86UD1 273 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 C1orf216Q8TAB5 229 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 SPPL3Q8TCT6 385 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 MARVELD1Q9BSK0 173 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 SLC46A2Q9BY10 475 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 CWH43Q9H720 699 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 ZDHHC4Q9NPG8 344 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 OR51B4Q9Y5P0 310 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 TEX13CA0A0J9YWL9 993 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 FAM170BA6NMN3 283 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 ATP6V1G2-DDX39BF2Z307 99 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 PSMD9O00233 223 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 REM1O75628 298 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 RGS11O94810 467 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 RPP14O95059 124 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms