RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 C3orf30Q96M34 536 aa10.09□□□□□ -0.79
TARDBP-221ENST00000619555 RTN4RQ9BZR6 473 aa10.09□□□□□ -0.79
TARDBP-221ENST00000619555 PIGMQ9H3S5 423 aa10.09□□□□□ -0.79
TARDBP-221ENST00000619555 TAS2R9Q9NYW1 312 aa10.09□□□□□ -0.79
TARDBP-221ENST00000619555 MED11Q9P086 117 aa10.09□□□□□ -0.79
TARDBP-221ENST00000619555 GIMAP2Q9UG22 337 aa10.09□□□□□ -0.79
TARDBP-221ENST00000619555 PACSIN3Q9UKS6 424 aa10.09□□□□□ -0.79
TARDBP-221ENST00000619555 POLR3HQ9Y535 204 aaPredicted RBP10.09□□□□□ -0.79
TARDBP-221ENST00000619555 TMEM114B3SHH9 223 aa10.08□□□□□ -0.8
TARDBP-221ENST00000619555 NPIPB8E9PQR5 432 aa10.08□□□□□ -0.8
TARDBP-221ENST00000619555 H0YC42 278 aa10.08□□□□□ -0.8
TARDBP-221ENST00000619555 CASKO14936 926 aa10.08□□□□□ -0.8
TARDBP-221ENST00000619555 LSM1O15116 133 aaKnown RBP10.08□□□□□ -0.8
TARDBP-221ENST00000619555 FADS1O60427 444 aa10.08□□□□□ -0.8
TARDBP-221ENST00000619555 SKAP2O75563 359 aaPredicted RBP10.08□□□□□ -0.8
TARDBP-221ENST00000619555 HSPA4LO95757 839 aa10.08□□□□□ -0.8
TARDBP-221ENST00000619555 FOSL1P15407 271 aa10.08□□□□□ -0.8
TARDBP-221ENST00000619555 HK1P19367 917 aa10.08□□□□□ -0.8
TARDBP-221ENST00000619555 CD53P19397 219 aa10.08□□□□□ -0.8
TARDBP-221ENST00000619555 DDCP20711 480 aa10.08□□□□□ -0.8
TARDBP-221ENST00000619555 PRPH2P23942 346 aa10.08□□□□□ -0.8
TARDBP-221ENST00000619555 EVI2BP34910 448 aa10.08□□□□□ -0.8
TARDBP-221ENST00000619555 CPOXP36551 454 aa10.08□□□□□ -0.8
TARDBP-221ENST00000619555 MC3RP41968 323 aa10.08□□□□□ -0.8
TARDBP-221ENST00000619555 SLC1A6P48664 564 aa10.08□□□□□ -0.8
TARDBP-221ENST00000619555 NCBP2P52298 156 aaKnown RBP eCLIP10.08□□□□□ -0.8
TARDBP-221ENST00000619555 SUCLG1P53597 346 aaKnown RBP10.08□□□□□ -0.8
TARDBP-221ENST00000619555 DIO3P55073 304 aa10.08□□□□□ -0.8
TARDBP-221ENST00000619555 TPD52P55327 224 aaPredicted RBP10.08□□□□□ -0.8
TARDBP-221ENST00000619555 DSCR4P56555 118 aaPredicted RBP10.08□□□□□ -0.8
TARDBP-221ENST00000619555 CLDN15P56746 228 aa10.08□□□□□ -0.8
TARDBP-221ENST00000619555 MRPS22P82650 360 aaKnown RBP10.08□□□□□ -0.8
TARDBP-221ENST00000619555 STX5Q13190 355 aa10.08□□□□□ -0.8
TARDBP-221ENST00000619555 BCL2A1Q16548 175 aa10.08□□□□□ -0.8
TARDBP-221ENST00000619555 IMPG1Q17R60 797 aa10.08□□□□□ -0.8
TARDBP-221ENST00000619555 XKR7Q5GH72 579 aa10.08□□□□□ -0.8
TARDBP-221ENST00000619555 SPDYAQ5MJ70 313 aa10.08□□□□□ -0.8
TARDBP-221ENST00000619555 HHATQ5VTY9 493 aa10.08□□□□□ -0.8
TARDBP-221ENST00000619555 VWA1Q6PCB0 445 aa10.08□□□□□ -0.8
TARDBP-221ENST00000619555 TMEM107Q6UX40 140 aa10.08□□□□□ -0.8
TARDBP-221ENST00000619555 CHMP1BQ7LBR1 199 aa10.08□□□□□ -0.8
TARDBP-221ENST00000619555 CNEP1R1Q8N9A8 125 aa10.08□□□□□ -0.8
TARDBP-221ENST00000619555 FADS6Q8N9I5 356 aa10.08□□□□□ -0.8
TARDBP-221ENST00000619555 OR2M3Q8NG83 312 aa10.08□□□□□ -0.8
TARDBP-221ENST00000619555 OR5M1Q8NGP8 315 aa10.08□□□□□ -0.8
TARDBP-221ENST00000619555 PPP1R14CQ8TAE6 165 aa10.08□□□□□ -0.8
TARDBP-221ENST00000619555 FIG4Q92562 907 aa10.08□□□□□ -0.8
TARDBP-221ENST00000619555 STARD4Q96DR4 205 aa10.08□□□□□ -0.8
TARDBP-221ENST00000619555 FCRL1Q96LA6 429 aa10.08□□□□□ -0.8
TARDBP-221ENST00000619555 ACBD3Q9H3P7 528 aa10.08□□□□□ -0.8
TARDBP-221ENST00000619555 EML4Q9HC35 981 aaKnown RBP10.08□□□□□ -0.8
TARDBP-221ENST00000619555 SIRT5Q9NXA8 310 aa10.08□□□□□ -0.8
TARDBP-221ENST00000619555 PPP4R1LQ9P1A2 415 aa10.08□□□□□ -0.8
TARDBP-221ENST00000619555 HAO1Q9UJM8 370 aa10.08□□□□□ -0.8
TARDBP-221ENST00000619555 HEATR5AQ86XA9 2040 aa10.07□□□□□ -0.8
TARDBP-221ENST00000619555 FN1P02751 2386 aaKnown RBP10.07□□□□□ -0.8
TARDBP-221ENST00000619555 SLC22A20A6NK97 555 aa10.07□□□□□ -0.8
TARDBP-221ENST00000619555 UPK1AO00322 258 aa10.07□□□□□ -0.8
TARDBP-221ENST00000619555 SLC28A1O00337 649 aa10.07□□□□□ -0.8
TARDBP-221ENST00000619555 MSTNO14793 375 aa10.07□□□□□ -0.8
TARDBP-221ENST00000619555 COQ9O75208 318 aa10.07□□□□□ -0.8
TARDBP-221ENST00000619555 SNNO75324 88 aaPredicted RBP10.07□□□□□ -0.8
TARDBP-221ENST00000619555 SMNDC1O75940 238 aaKnown RBP eCLIP10.07□□□□□ -0.82e-8■■■■■ 29.2
TARDBP-221ENST00000619555 GOSR1O95249 250 aa10.07□□□□□ -0.8
TARDBP-221ENST00000619555 PEPDP12955 493 aa10.07□□□□□ -0.8
TARDBP-221ENST00000619555 HOXC12P31275 282 aa10.07□□□□□ -0.8
TARDBP-221ENST00000619555 EEF1A1P68104 462 aaKnown RBP10.07□□□□□ -0.8
TARDBP-221ENST00000619555 PSPHP78330 225 aa10.07□□□□□ -0.8
TARDBP-221ENST00000619555 ZNF763Q0D2J5 394 aa10.07□□□□□ -0.8
TARDBP-221ENST00000619555 STX3Q13277 289 aa10.07□□□□□ -0.8
TARDBP-221ENST00000619555 CYP27C1Q4G0S4 372 aa10.07□□□□□ -0.8
TARDBP-221ENST00000619555 RFTN2Q52LD8 501 aaPredicted RBP10.07□□□□□ -0.8
TARDBP-221ENST00000619555 EEF1A1P5Q5VTE0 462 aa10.07□□□□□ -0.8
TARDBP-221ENST00000619555 RAET1LQ5VY80 246 aa10.07□□□□□ -0.8
TARDBP-221ENST00000619555 FAM71E1Q6IPT2 247 aa10.07□□□□□ -0.8
TARDBP-221ENST00000619555 NOXRED1Q6NXP6 359 aa10.07□□□□□ -0.8
TARDBP-221ENST00000619555 ZNF474Q6S9Z5 364 aaPredicted RBP10.07□□□□□ -0.8
TARDBP-221ENST00000619555 BTLAQ7Z6A9 289 aa10.07□□□□□ -0.8
TARDBP-221ENST00000619555 KRTAP1-3Q8IUG1 177 aa10.07□□□□□ -0.8
TARDBP-221ENST00000619555 DDIASQ8IXT1 998 aa10.07□□□□□ -0.8
TARDBP-221ENST00000619555 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.07□□□□□ -0.82e-21■■□□□ 12.4
TARDBP-221ENST00000619555 DUSP19Q8WTR2 217 aa10.07□□□□□ -0.8
TARDBP-221ENST00000619555 SMPDL3BQ92485 455 aa10.07□□□□□ -0.8
TARDBP-221ENST00000619555 DTNBP1Q96EV8 351 aa10.07□□□□□ -0.8
TARDBP-221ENST00000619555 EGLN2Q96KS0 407 aa10.07□□□□□ -0.8
TARDBP-221ENST00000619555 WFIKKN1Q96NZ8 548 aa10.07□□□□□ -0.8
TARDBP-221ENST00000619555 SMR3AQ99954 134 aa10.07□□□□□ -0.8
TARDBP-221ENST00000619555 OPN3Q9H1Y3 402 aaPredicted RBP10.07□□□□□ -0.8
TARDBP-221ENST00000619555 GLIPR2Q9H4G4 154 aa10.07□□□□□ -0.8
TARDBP-221ENST00000619555 LRTM1Q9HBL6 345 aa10.07□□□□□ -0.8
TARDBP-221ENST00000619555 NEUROD4Q9HD90 331 aa10.07□□□□□ -0.8
TARDBP-221ENST00000619555 PNPOQ9NVS9 261 aa10.07□□□□□ -0.8
TARDBP-221ENST00000619555 C6orf203Q9P0P8 240 aaPredicted RBP10.07□□□□□ -0.8
TARDBP-221ENST00000619555 NDRG3Q9UGV2 375 aa10.07□□□□□ -0.8
TARDBP-221ENST00000619555 C19orf53Q9UNZ5 99 aaPredicted RBP10.07□□□□□ -0.8
TARDBP-221ENST00000619555 RAP2CQ9Y3L5 183 aa10.07□□□□□ -0.8
TARDBP-221ENST00000619555 ZNF337Q9Y3M9 751 aa10.07□□□□□ -0.8
TARDBP-221ENST00000619555 TESMINQ9Y4I5 508 aa10.07□□□□□ -0.8
TARDBP-221ENST00000619555 USF3Q68DE3 2245 aa10.07□□□□□ -0.8
TARDBP-221ENST00000619555 DSCAMO60469 2012 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms