RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 ACBD7Q8N6N7 88 aa13.17□□□□□ -0.3
TNFRSF11A-205ENST00000616710 HORMAD2Q8N7B1 307 aa13.17□□□□□ -0.3
TNFRSF11A-205ENST00000616710 OR4D9Q8NGE8 314 aa13.17□□□□□ -0.3
TNFRSF11A-205ENST00000616710 OR4D10Q8NGI6 311 aa13.17□□□□□ -0.3
TNFRSF11A-205ENST00000616710 CASTOR1Q8WTX7 329 aa13.17□□□□□ -0.3
TNFRSF11A-205ENST00000616710 SLC38A5Q8WUX1 472 aa13.17□□□□□ -0.3
TNFRSF11A-205ENST00000616710 SNX33Q8WV41 574 aa13.17□□□□□ -0.3
TNFRSF11A-205ENST00000616710 MAGEH1Q9H213 219 aa13.17□□□□□ -0.3
TNFRSF11A-205ENST00000616710 MAP1BP46821 2468 aaKnown RBP13.17□□□□□ -0.3
TNFRSF11A-205ENST00000616710 SLC16A8O95907 504 aa13.17□□□□□ -0.3
TNFRSF11A-205ENST00000616710 PSMB1P20618 241 aaKnown RBP13.17□□□□□ -0.3
TNFRSF11A-205ENST00000616710 TIA1P31483 386 aaKnown RBP eCLIP13.17□□□□□ -0.3
TNFRSF11A-205ENST00000616710 TCTN3Q6NUS6 607 aa13.17□□□□□ -0.3
TNFRSF11A-205ENST00000616710 BHLHA9Q7RTU4 235 aa13.17□□□□□ -0.3
TNFRSF11A-205ENST00000616710 MTMR14Q8NCE2 650 aa13.17□□□□□ -0.3
TNFRSF11A-205ENST00000616710 PXT1Q8NFP0 134 aa13.17□□□□□ -0.3
TNFRSF11A-205ENST00000616710 OR51A7Q8NH64 312 aa13.17□□□□□ -0.3
TNFRSF11A-205ENST00000616710 NR4A3Q92570 626 aa13.17□□□□□ -0.3
TNFRSF11A-205ENST00000616710 CHRDQ9H2X0 955 aa13.17□□□□□ -0.3
TNFRSF11A-205ENST00000616710 POLMQ9NP87 494 aaPredicted RBP13.17□□□□□ -0.3
TNFRSF11A-205ENST00000616710 CA10Q9NS85 328 aa13.17□□□□□ -0.3
TNFRSF11A-205ENST00000616710 FARSAQ9Y285 508 aaKnown RBP13.17□□□□□ -0.3
TNFRSF11A-205ENST00000616710 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.17□□□□□ -0.3
TNFRSF11A-205ENST00000616710 CKMP06732 381 aa13.17□□□□□ -0.3
TNFRSF11A-205ENST00000616710 ACP2P11117 423 aa13.17□□□□□ -0.3
TNFRSF11A-205ENST00000616710 UGT2B7P16662 529 aa13.17□□□□□ -0.3
TNFRSF11A-205ENST00000616710 CXCL2P19875 107 aa13.17□□□□□ -0.3
TNFRSF11A-205ENST00000616710 ITGB7P26010 798 aa13.17□□□□□ -0.3
TNFRSF11A-205ENST00000616710 SLC6A11P48066 632 aa13.17□□□□□ -0.3
TNFRSF11A-205ENST00000616710 GSG1Q2KHT4 349 aa13.17□□□□□ -0.3
TNFRSF11A-205ENST00000616710 HECTD3Q5T447 861 aa13.17□□□□□ -0.3
TNFRSF11A-205ENST00000616710 PIP5KL1Q5T9C9 394 aa13.17□□□□□ -0.3
TNFRSF11A-205ENST00000616710 CXCL17Q6UXB2 119 aa13.17□□□□□ -0.3
TNFRSF11A-205ENST00000616710 GIMAP5Q96F15 307 aa13.17□□□□□ -0.3
TNFRSF11A-205ENST00000616710 OR1F2PQ96R84 312 aa13.17□□□□□ -0.3
TNFRSF11A-205ENST00000616710 SCN9AQ15858 1988 aa13.17□□□□□ -0.3
TNFRSF11A-205ENST00000616710 AQP2P41181 271 aa13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 CRYBA2P53672 197 aa13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 TP53I3Q53FA7 332 aa13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 ACSM3Q53FZ2 586 aa13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 C3orf38Q5JPI3 329 aa13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 TMEM69Q5SWH9 247 aa13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 UBXN11Q5T124 520 aa13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 PRPF38BQ5VTL8 546 aaKnown RBP13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 FRRS1Q6ZNA5 592 aa13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 LRRC70Q7Z2Q7 622 aa13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 LILRA3Q8N6C8 439 aaPredicted RBP13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 ZNF740Q8NDX6 193 aa13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 GPRC5AQ8NFJ5 357 aa13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 DUSP19Q8WTR2 217 aa13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 SCARB1Q8WTV0 552 aa13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 LINC01599Q8WXQ3 324 aa13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 SLC6A18Q96N87 628 aa13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 NDC1Q9BTX1 674 aa13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 PLAGL1Q9UM63 463 aa13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 RPH3AQ9Y2J0 694 aaPredicted RBP13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 C13orf42A0A1B0GVH6 325 aa13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 QSOX1O00391 747 aa13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 FADS1O60427 444 aa13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 PRAMEF2O60811 474 aa13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 GJB5O95377 273 aa13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 RPL17P18621 184 aaKnown RBP13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 PDZK1IP1Q13113 114 aa13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 METTL11BQ5VVY1 283 aa13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 ZDHHC20Q5W0Z9 365 aa13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 SORCS1Q8WY21 1168 aa13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 NKD1Q969G9 470 aa13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 SLC6A16Q9GZN6 736 aa13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 SLITRK2Q9H156 845 aa13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 MYEF2Q9P2K5 600 aaKnown RBP13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 PIKFYVEQ9Y2I7 2098 aa13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 TRDV1A0A1B0GX56 115 aa13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 AGAP14A8MT82 685 aa13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 FBXO45P0C2W1 286 aa13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 HAAOP46952 286 aa13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 ACVR1Q04771 509 aa13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 MANEALQ5VSG8 457 aa13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 GLT8D1Q68CQ7 371 aa13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 H3F3CQ6NXT2 135 aa13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 METAP1DQ6UB28 335 aaPredicted RBP13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 C6orf120Q7Z4R8 191 aa13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 DDX53Q86TM3 631 aaKnown RBP13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 ZNF546Q86UE3 836 aa13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 BPIFCQ8NFQ6 507 aa13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 OR6K6Q8NGW6 343 aa13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 PIGXQ8TBF5 258 aa13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 SAMD8Q96LT4 415 aa13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 HEXA-AS1Q9H8Q6 139 aa13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 AHSPQ9NZD4 102 aa13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 DPP7Q9UHL4 492 aa13.16□□□□□ -0.3
TNFRSF11A-205ENST00000616710 NFKBIEO00221 500 aa13.15□□□□□ -0.3
TNFRSF11A-205ENST00000616710 PSMB10P40306 273 aa13.15□□□□□ -0.3
TNFRSF11A-205ENST00000616710 SEC61A1P61619 476 aaKnown RBP13.15□□□□□ -0.3
TNFRSF11A-205ENST00000616710 RAB40BQ12829 278 aa13.15□□□□□ -0.3
TNFRSF11A-205ENST00000616710 HLXQ14774 488 aaPredicted RBP13.15□□□□□ -0.3
TNFRSF11A-205ENST00000616710 C9orf64Q5T6V5 341 aa13.15□□□□□ -0.3
TNFRSF11A-205ENST00000616710 YOD1Q5VVQ6 348 aaPredicted RBP13.15□□□□□ -0.3
TNFRSF11A-205ENST00000616710 MLIPQ5VWP3 458 aa13.15□□□□□ -0.3
TNFRSF11A-205ENST00000616710 ALKAL1Q6UXT8 129 aa13.15□□□□□ -0.3
TNFRSF11A-205ENST00000616710 TSEN54Q7Z6J9 526 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms