RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 NPC1O15118 1278 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 FLRT2O43155 660 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 SSNA1O43805 119 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 MRPL3P09001 348 aaKnown RBP5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 CISD3P0C7P0 127 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 AHCYP23526 432 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 ITGB8P26012 769 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 SLC6A6P31641 620 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 ELOA3BQ3SY89 546 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 AGAP7PQ5VUJ5 663 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 LAIR2Q6ISS4 152 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 SYCE2Q6PIF2 218 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 ABHD13Q7L211 337 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 ELOA3Q8NG57 546 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 OR4K13Q8NH42 304 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 TMEM239Q8WW34 195 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 NRTNQ99748 197 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 GAL3ST1Q99999 423 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 MED28Q9H204 178 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 SACM1LQ9NTJ5 587 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 BABAM2Q9NXR7 383 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 ING4Q9UNL4 249 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 NAALAD2Q9Y3Q0 740 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 A0A0C4DFX4 3053 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 NPIPA5A0A0B4J1W7 369 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 OR6C70A6NIJ9 312 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 NPIPA7E9PJI5 369 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 BLOC1S5-TXNDC5H3BN57 136 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 SOX30O94993 753 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 HBQ1P09105 142 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 NPIPA8P0DM63 369 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 MNDAP41218 407 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 SNTB2Q13425 540 aaKnown RBP5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 ENPP2Q13822 863 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 NDUFA5Q16718 116 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 MPEG1Q2M385 716 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 PUS10Q3MIT2 529 aaKnown RBP5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 MFSD12Q6NUT3 480 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 FAM220AQ7Z4H9 259 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 LYSMD2Q8IV50 215 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 TMEFF1Q8IYR6 380 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 OR2L8Q8NGY9 312 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 PHOSPHO1Q8TCT1 267 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 RLN3Q8WXF3 142 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 BPIFA2Q96DR5 249 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 WDR34Q96EX3 536 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 C5orf34Q96MH7 638 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 NELL2Q99435 816 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 CCDC32Q9BV29 185 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 CFHR5Q9BXR6 569 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 TMEM168Q9H0V1 697 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 EGLN3Q9H6Z9 239 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 SERGEFQ9UGK8 458 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 SH2B3Q9UQQ2 575 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 USP9XQ93008 2570 aaPredicted RBP5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 H0YGG7 62 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 MAN2B1O00754 1011 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 DPM1O60762 260 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 PAPLNO95428 1278 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 YES1P07947 543 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 SOX2P48431 317 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 GBX2P52951 348 aaPredicted RBP5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 ARF3P61204 181 aaPredicted RBP5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 TEKQ02763 1124 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 PGGHGQ32M88 737 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 NDUFAF6Q330K2 333 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 PRSS36Q5K4E3 855 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 ARTNQ5T4W7 220 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 TMEM53Q6P2H8 277 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 RASSF6Q6ZTQ3 369 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 CEACAM19Q7Z692 300 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 NKAIN4Q8IVV8 208 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 ARSGQ96EG1 525 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 PIGUQ9H490 435 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 USP36Q9P275 1121 aaKnown RBP5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 TBC1D29Q9UFV1 150 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 A0A0A6YYC8 382 aaPredicted RBP5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 H0Y8X5 98 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 I3L1I5 382 aaPredicted RBP5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 RFXAPO00287 272 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 LDB3O75112 727 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 ERP29P30040 261 aaKnown RBP5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 GUCA1AP43080 201 aaPredicted RBP5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 PRKCDQ05655 676 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 LTB4RQ15722 352 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 GDPD3Q7L5L3 318 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 GID4Q8IVV7 300 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 ASCC1Q8N9N2 400 aaKnown RBP5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 RNF31Q96EP0 1072 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 SNX18Q96RF0 628 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 PINK1Q9BXM7 581 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 BEX1Q9HBH7 125 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 AKIP1Q9NQ31 210 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 ZC4H2Q9NQZ6 224 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 A8MUA0 341 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 C2orf74A8MZ97 194 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 CPNE3O75131 537 aaKnown RBP5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 RDH16O75452 317 aa5.28□□□□□ -1.56
SYNCRIP-204ENST00000616122 RLN1P04808 185 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms