RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.28□□□□□ -0.76
CDC42EP3-206ENST00000611976 PRSS58Q8IYP2 241 aa10.28□□□□□ -0.76
CDC42EP3-206ENST00000611976 NIPAL2Q9H841 368 aa10.28□□□□□ -0.76
CDC42EP3-206ENST00000611976 PLCL2Q9UPR0 1127 aa10.28□□□□□ -0.76
CDC42EP3-206ENST00000611976 RASD1Q9Y272 281 aa10.28□□□□□ -0.76
CDC42EP3-206ENST00000611976 CORINQ9Y5Q5 1042 aa10.28□□□□□ -0.76
CDC42EP3-206ENST00000611976 GFRA2O00451 464 aa10.27□□□□□ -0.76
CDC42EP3-206ENST00000611976 RNGTTO60942 597 aaKnown RBP10.27□□□□□ -0.76
CDC42EP3-206ENST00000611976 SPARCP09486 303 aa10.27□□□□□ -0.76
CDC42EP3-206ENST00000611976 C5AR1P21730 350 aa10.27□□□□□ -0.76
CDC42EP3-206ENST00000611976 PTBP1P26599 531 aaKnown RBP eCLIP10.27□□□□□ -0.76
CDC42EP3-206ENST00000611976 HLA-FP30511 346 aa10.27□□□□□ -0.76
CDC42EP3-206ENST00000611976 RPS25P62851 125 aaKnown RBP10.27□□□□□ -0.76
CDC42EP3-206ENST00000611976 KCNJ10P78508 379 aa10.27□□□□□ -0.76
CDC42EP3-206ENST00000611976 KCTD9Q7L273 389 aa10.27□□□□□ -0.76
CDC42EP3-206ENST00000611976 OR2T4Q8NH00 348 aa10.27□□□□□ -0.76
CDC42EP3-206ENST00000611976 ADAMTS14Q8WXS8 1223 aa10.27□□□□□ -0.76
CDC42EP3-206ENST00000611976 GAL3ST3Q96A11 431 aa10.27□□□□□ -0.76
CDC42EP3-206ENST00000611976 OR52D1Q9H346 318 aa10.27□□□□□ -0.76
CDC42EP3-206ENST00000611976 PCDH10Q9P2E7 1040 aa10.27□□□□□ -0.76
CDC42EP3-206ENST00000611976 A0A1W2PQU0 124 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 OR6C74A6NCV1 312 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 SLC43A1O75387 559 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 SLC1A3P43003 542 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 CST6Q15828 149 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 OCLNQ16625 522 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 FAM76BQ5HYJ3 339 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 ENTPD8Q5MY95 495 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 KIAA1211LQ6NV74 962 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 TMEM205Q6UW68 189 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 BEST3Q8N1M1 668 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 CSNK1A1LQ8N752 337 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 OR5J2Q8NH18 312 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 OR5AK2Q8NH90 309 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 ADAMTS18Q8TE60 1221 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 OR7D2Q96RA2 312 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 CDCA4Q9BXL8 241 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 NTN4Q9HB63 628 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 MEPEQ9NQ76 525 aaPredicted RBP10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 TEX10Q9NXF1 929 aaPredicted RBP10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 C14orf166Q9Y224 244 aaKnown RBP10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 OR5K4A6NMS3 321 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 H3BSH0 61 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 APOC1P02654 83 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 RNH1P13489 461 aaKnown RBP10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 CBLP22681 906 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 XCR1P46094 333 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 MASP1P48740 699 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 GDI2P50395 445 aaKnown RBP10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 RNF144AP50876 292 aaPredicted RBP10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 AQP6Q13520 282 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 COL28A1Q2UY09 1125 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 INAVAQ3KP66 663 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 HES5Q5TA89 166 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 HBMQ6B0K9 141 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 HAGHLQ6PII5 290 aaPredicted RBP10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 STX12Q86Y82 276 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 VRK3Q8IV63 474 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 OR4N5Q8IXE1 308 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 PM20D2Q8IYS1 436 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 NUDT8Q8WV74 236 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 CNOT9Q92600 299 aaKnown RBP10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 UBE2FQ969M7 185 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 DOK1Q99704 481 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 PSD2Q9BQI7 771 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 SLC28A3Q9HAS3 691 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 FBXO9Q9UK97 447 aaPredicted RBP10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 SNX11Q9Y5W9 270 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 ZNF726A6NNF4 738 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 WASHC1A8K0Z3 465 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 KIAA0355O15063 1070 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 DNAJB6O75190 326 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 SC5DO75845 299 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 HTR2AP28223 471 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 FNTBP49356 437 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 PRPS1P60891 318 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 RAB11BQ15907 218 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 TP53I3Q53FA7 332 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 OR7G1Q8NGA0 311 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 SNIP1Q8TAD8 396 aaKnown RBP10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 TMEM185BQ9H7F4 350 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 NANSQ9NR45 359 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 MARCH5Q9NX47 278 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 SLC39A1Q9NY26 324 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 DOCK1Q14185 1865 aa10.27□□□□□ -0.77
CDC42EP3-206ENST00000611976 LOC100509620A0A075B734 347 aa10.26□□□□□ -0.77
CDC42EP3-206ENST00000611976 ACOT7O00154 380 aa10.26□□□□□ -0.77
CDC42EP3-206ENST00000611976 HIST1H1TP22492 207 aaPredicted RBP10.26□□□□□ -0.77
CDC42EP3-206ENST00000611976 KCNJ5P48544 419 aa10.26□□□□□ -0.77
CDC42EP3-206ENST00000611976 PSPHP78330 225 aa10.26□□□□□ -0.77
CDC42EP3-206ENST00000611976 PLEKHN1Q494U1 663 aaPredicted RBP10.26□□□□□ -0.77
CDC42EP3-206ENST00000611976 OR4F15Q8NGB8 312 aa10.26□□□□□ -0.77
CDC42EP3-206ENST00000611976 CASTOR1Q8WTX7 329 aa10.26□□□□□ -0.77
CDC42EP3-206ENST00000611976 ZC3H10Q96K80 434 aaKnown RBP10.26□□□□□ -0.77
CDC42EP3-206ENST00000611976 C19orf43Q9BQ61 176 aa10.26□□□□□ -0.77
CDC42EP3-206ENST00000611976 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.26□□□□□ -0.77
CDC42EP3-206ENST00000611976 EPHX3Q9H6B9 360 aa10.26□□□□□ -0.77
CDC42EP3-206ENST00000611976 EGLN3Q9H6Z9 239 aa10.26□□□□□ -0.77
CDC42EP3-206ENST00000611976 CXorf36Q9H7Y0 433 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms