RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 ZNF404Q494X3 552 aa12.66□□□□□ -0.38
NEK3-205ENST00000610828 SLC25A30Q5SVS4 291 aa12.66□□□□□ -0.38
NEK3-205ENST00000610828 SLC30A6Q6NXT4 461 aa12.66□□□□□ -0.38
NEK3-205ENST00000610828 PAQR6Q6TCH4 344 aa12.66□□□□□ -0.38
NEK3-205ENST00000610828 Q6ZNX1 250 aa12.66□□□□□ -0.38
NEK3-205ENST00000610828 MBOAT2Q6ZWT7 520 aa12.66□□□□□ -0.38
NEK3-205ENST00000610828 GKN2Q86XP6 184 aa12.66□□□□□ -0.38
NEK3-205ENST00000610828 ARHGEF39Q8N4T4 335 aa12.66□□□□□ -0.38
NEK3-205ENST00000610828 KBTBD8Q8NFY9 601 aa12.66□□□□□ -0.38
NEK3-205ENST00000610828 TMEM163Q8TC26 289 aa12.66□□□□□ -0.38
NEK3-205ENST00000610828 PEX11GQ96HA9 241 aa12.66□□□□□ -0.38
NEK3-205ENST00000610828 OPALINQ96PE5 141 aa12.66□□□□□ -0.38
NEK3-205ENST00000610828 IL20RAQ9UHF4 553 aa12.66□□□□□ -0.38
NEK3-205ENST00000610828 LSM2Q9Y333 95 aaKnown RBP12.66□□□□□ -0.38
NEK3-205ENST00000610828 KRBA1A5PL33 1030 aa12.66□□□□□ -0.38
NEK3-205ENST00000610828 METTL12A8MUP2 240 aa12.66□□□□□ -0.38
NEK3-205ENST00000610828 MYL12BO14950 172 aa12.66□□□□□ -0.38
NEK3-205ENST00000610828 MED26O95402 600 aa12.66□□□□□ -0.38
NEK3-205ENST00000610828 CBX7O95931 251 aa12.66□□□□□ -0.38
NEK3-205ENST00000610828 SCG5P05408 212 aa12.66□□□□□ -0.38
NEK3-205ENST00000610828 PROS1P07225 676 aa12.66□□□□□ -0.38
NEK3-205ENST00000610828 BMP4P12644 408 aa12.66□□□□□ -0.38
NEK3-205ENST00000610828 RPS4Y1P22090 263 aaKnown RBP12.66□□□□□ -0.38
NEK3-205ENST00000610828 STX4Q12846 297 aa12.66□□□□□ -0.38
NEK3-205ENST00000610828 SSX1Q16384 188 aa12.66□□□□□ -0.38
NEK3-205ENST00000610828 TIMM50Q3ZCQ8 353 aa12.66□□□□□ -0.38
NEK3-205ENST00000610828 ZC3H14Q6PJT7 736 aaKnown RBP12.66□□□□□ -0.38
NEK3-205ENST00000610828 ATCAYQ86WG3 371 aa12.66□□□□□ -0.38
NEK3-205ENST00000610828 AMER2Q8N7J2 671 aa12.66□□□□□ -0.38
NEK3-205ENST00000610828 C6orf62Q9GZU0 229 aaPredicted RBP12.66□□□□□ -0.38
NEK3-205ENST00000610828 B3GNT3Q9Y2A9 372 aa12.66□□□□□ -0.38
NEK3-205ENST00000610828 SRPX2O60687 465 aaPredicted RBP12.65□□□□□ -0.38
NEK3-205ENST00000610828 APOL3O95236 402 aa12.65□□□□□ -0.38
NEK3-205ENST00000610828 ATXN8OSP0DMR3 200 aa12.65□□□□□ -0.38
NEK3-205ENST00000610828 MAP3K8P41279 467 aa12.65□□□□□ -0.38
NEK3-205ENST00000610828 STAT5AP42229 794 aa12.65□□□□□ -0.38
NEK3-205ENST00000610828 MAT1AQ00266 395 aaKnown RBP12.65□□□□□ -0.38
NEK3-205ENST00000610828 RGS21Q2M5E4 152 aa12.65□□□□□ -0.38
NEK3-205ENST00000610828 PRTGQ2VWP7 1150 aa12.65□□□□□ -0.38
NEK3-205ENST00000610828 SLC36A4Q6YBV0 504 aa12.65□□□□□ -0.38
NEK3-205ENST00000610828 MFSD4AQ8N468 514 aa12.65□□□□□ -0.38
NEK3-205ENST00000610828 NANOGP1Q8N7R0 232 aa12.65□□□□□ -0.38
NEK3-205ENST00000610828 OR52I1Q8NGK6 324 aa12.65□□□□□ -0.38
NEK3-205ENST00000610828 OSTF1Q92882 214 aa12.65□□□□□ -0.38
NEK3-205ENST00000610828 FGF11Q92914 225 aa12.65□□□□□ -0.38
NEK3-205ENST00000610828 RBM18Q96H35 190 aaKnown RBP12.65□□□□□ -0.38
NEK3-205ENST00000610828 TAPBPLQ9BX59 468 aa12.65□□□□□ -0.38
NEK3-205ENST00000610828 PRRG3Q9BZD7 231 aa12.65□□□□□ -0.38
NEK3-205ENST00000610828 FOXQ1Q9C009 403 aa12.65□□□□□ -0.38
NEK3-205ENST00000610828 POLR2J2Q9GZM3 115 aaKnown RBP12.65□□□□□ -0.38
NEK3-205ENST00000610828 HHATLQ9HCP6 504 aa12.65□□□□□ -0.38
NEK3-205ENST00000610828 NLGN3Q9NZ94 848 aa12.65□□□□□ -0.38
NEK3-205ENST00000610828 A0A1W2PR77 199 aa12.65□□□□□ -0.38
NEK3-205ENST00000610828 TRAPPC13A5PLN9 417 aa12.65□□□□□ -0.38
NEK3-205ENST00000610828 CDHR4A6H8M9 788 aa12.65□□□□□ -0.38
NEK3-205ENST00000610828 PRODHO43272 600 aa12.65□□□□□ -0.38
NEK3-205ENST00000610828 FOXS1O43638 330 aa12.65□□□□□ -0.38
NEK3-205ENST00000610828 BRINP1O60477 761 aa12.65□□□□□ -0.38
NEK3-205ENST00000610828 RAB36O95755 333 aa12.65□□□□□ -0.38
NEK3-205ENST00000610828 AK1P00568 194 aa12.65□□□□□ -0.38
NEK3-205ENST00000610828 HBQ1P09105 142 aa12.65□□□□□ -0.38
NEK3-205ENST00000610828 RNH1P13489 461 aaKnown RBP12.65□□□□□ -0.38
NEK3-205ENST00000610828 HTR2AP28223 471 aa12.65□□□□□ -0.38
NEK3-205ENST00000610828 LIMK1P53667 647 aa12.65□□□□□ -0.38
NEK3-205ENST00000610828 SKP1P63208 163 aa12.65□□□□□ -0.38
NEK3-205ENST00000610828 RPL6Q02878 288 aaKnown RBP12.65□□□□□ -0.38
NEK3-205ENST00000610828 FZD5Q13467 585 aa12.65□□□□□ -0.38
NEK3-205ENST00000610828 C1DQ13901 141 aaKnown RBP12.65□□□□□ -0.38
NEK3-205ENST00000610828 ERV3-1Q14264 604 aa12.65□□□□□ -0.38
NEK3-205ENST00000610828 C19orf48Q6RUI8 117 aa12.65□□□□□ -0.38
NEK3-205ENST00000610828 ZAR1Q86SH2 424 aa12.65□□□□□ -0.38
NEK3-205ENST00000610828 SNX29P2Q8IUI4 249 aa12.65□□□□□ -0.38
NEK3-205ENST00000610828 ZNF614Q8N883 585 aa12.65□□□□□ -0.38
NEK3-205ENST00000610828 PROKR2Q8NFJ6 384 aa12.65□□□□□ -0.38
NEK3-205ENST00000610828 TOR1AIP2Q8NFQ8 470 aa12.65□□□□□ -0.38
NEK3-205ENST00000610828 RIT1Q92963 219 aa12.65□□□□□ -0.38
NEK3-205ENST00000610828 ARSGQ96EG1 525 aa12.65□□□□□ -0.38
NEK3-205ENST00000610828 TCTN2Q96GX1 697 aa12.65□□□□□ -0.38
NEK3-205ENST00000610828 MMP27Q9H306 513 aa12.65□□□□□ -0.38
NEK3-205ENST00000610828 KRCC1Q9NPI7 259 aaPredicted RBP12.65□□□□□ -0.38
NEK3-205ENST00000610828 IL20Q9NYY1 176 aa12.65□□□□□ -0.38
NEK3-205ENST00000610828 DIMT1Q9UNQ2 313 aaKnown RBP12.65□□□□□ -0.38
NEK3-205ENST00000610828 METTL15A6NJ78 407 aa12.64□□□□□ -0.39
NEK3-205ENST00000610828 SNTNA6NMZ2 147 aa12.64□□□□□ -0.39
NEK3-205ENST00000610828 CDC42EP2O14613 210 aa12.64□□□□□ -0.39
NEK3-205ENST00000610828 DSCR3O14972 297 aa12.64□□□□□ -0.39
NEK3-205ENST00000610828 COQ9O75208 318 aa12.64□□□□□ -0.39
NEK3-205ENST00000610828 KCNK2O95069 426 aa12.64□□□□□ -0.39
NEK3-205ENST00000610828 RACK1P63244 317 aaKnown RBP12.64□□□□□ -0.39
NEK3-205ENST00000610828 OR1Q1Q15612 314 aa12.64□□□□□ -0.39
NEK3-205ENST00000610828 SMAD2Q15796 467 aaKnown RBP12.64□□□□□ -0.39
NEK3-205ENST00000610828 DEFB133Q30KQ1 61 aa12.64□□□□□ -0.39
NEK3-205ENST00000610828 FLYWCH1Q4VC44 716 aa12.64□□□□□ -0.39
NEK3-205ENST00000610828 KLHL22Q53GT1 634 aa12.64□□□□□ -0.39
NEK3-205ENST00000610828 ZNF620Q6ZNG0 422 aa12.64□□□□□ -0.39
NEK3-205ENST00000610828 DCDC5Q6ZRR9 648 aa12.64□□□□□ -0.39
NEK3-205ENST00000610828 MRGPREQ86SM8 312 aa12.64□□□□□ -0.39
NEK3-205ENST00000610828 CENPSQ8N2Z9 138 aa12.64□□□□□ -0.39
NEK3-205ENST00000610828 METTL27Q8N6F8 245 aaPredicted RBP12.64□□□□□ -0.39
NEK3-205ENST00000610828 POGLUT1Q8NBL1 392 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms