RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 STMN3Q9NZ72 180 aa19.09■□□□□ 0.65
SSBP3-216ENST00000610401 MT-ND4P03905 459 aa19.08■□□□□ 0.65
SSBP3-216ENST00000610401 PCSK2P16519 638 aa19.08■□□□□ 0.65
SSBP3-216ENST00000610401 SLC9A5Q14940 896 aa19.08■□□□□ 0.65
SSBP3-216ENST00000610401 DHCR24Q15392 516 aa19.08■□□□□ 0.65
SSBP3-216ENST00000610401 NTRK2Q16620 822 aa19.08■□□□□ 0.65
SSBP3-216ENST00000610401 HYAL4Q2M3T9 481 aa19.08■□□□□ 0.65
SSBP3-216ENST00000610401 CEACAM19Q7Z692 300 aa19.08■□□□□ 0.65
SSBP3-216ENST00000610401 SERPINA12Q8IW75 414 aa19.08■□□□□ 0.65
SSBP3-216ENST00000610401 NUP43Q8NFH3 380 aa19.08■□□□□ 0.65
SSBP3-216ENST00000610401 OR4D9Q8NGE8 314 aa19.08■□□□□ 0.65
SSBP3-216ENST00000610401 OR2L2Q8NH16 312 aa19.08■□□□□ 0.65
SSBP3-216ENST00000610401 GRHL3Q8TE85 626 aa19.08■□□□□ 0.65
SSBP3-216ENST00000610401 USP36Q9P275 1121 aaKnown RBP19.08■□□□□ 0.65
SSBP3-216ENST00000610401 DKK3Q9UBP4 350 aa19.08■□□□□ 0.65
SSBP3-216ENST00000610401 ENTPD4Q9Y227 616 aa19.08■□□□□ 0.65
SSBP3-216ENST00000610401 DAPL1A0PJW8 107 aa19.08■□□□□ 0.64
SSBP3-216ENST00000610401 PTHLHP12272 177 aa19.08■□□□□ 0.64
SSBP3-216ENST00000610401 ADRB3P13945 408 aa19.08■□□□□ 0.64
SSBP3-216ENST00000610401 SNRPBP14678 240 aaKnown RBP19.08■□□□□ 0.64
SSBP3-216ENST00000610401 RPA4Q13156 261 aa19.08■□□□□ 0.64
SSBP3-216ENST00000610401 DSG2Q14126 1118 aa19.08■□□□□ 0.64
SSBP3-216ENST00000610401 ZNF267Q14586 743 aaPredicted RBP19.08■□□□□ 0.64
SSBP3-216ENST00000610401 KCT2Q8NC54 265 aa19.08■□□□□ 0.64
SSBP3-216ENST00000610401 DNAJA3Q96EY1 480 aa19.08■□□□□ 0.64
SSBP3-216ENST00000610401 SPEF1Q9Y4P9 236 aa19.08■□□□□ 0.64
SSBP3-216ENST00000610401 SNRNP200O75643 2136 aaKnown RBP19.08■□□□□ 0.64
SSBP3-216ENST00000610401 NOTCH4Q99466 2003 aa19.08■□□□□ 0.64
SSBP3-216ENST00000610401 VSX2P58304 361 aaPredicted RBP19.07■□□□□ 0.64
SSBP3-216ENST00000610401 SFRP4Q6FHJ7 346 aaPredicted RBP19.07■□□□□ 0.64
SSBP3-216ENST00000610401 LYPD4Q6UWN0 246 aa19.07■□□□□ 0.64
SSBP3-216ENST00000610401 CXXC5Q7LFL8 322 aaKnown RBP19.07■□□□□ 0.64
SSBP3-216ENST00000610401 FBXO15Q8NCQ5 510 aaPredicted RBP19.07■□□□□ 0.64
SSBP3-216ENST00000610401 C17orf47Q8NEP4 570 aa19.07■□□□□ 0.64
SSBP3-216ENST00000610401 OR11H4Q8NGC9 324 aa19.07■□□□□ 0.64
SSBP3-216ENST00000610401 RASSF5Q8WWW0 418 aa19.07■□□□□ 0.64
SSBP3-216ENST00000610401 COQ10AQ96MF6 247 aa19.07■□□□□ 0.64
SSBP3-216ENST00000610401 ALG8Q9BVK2 526 aa19.07■□□□□ 0.64
SSBP3-216ENST00000610401 COL4A6Q14031 1691 aa19.07■□□□□ 0.64
SSBP3-216ENST00000610401 TRAV27A0A087WT01 109 aa19.07■□□□□ 0.64
SSBP3-216ENST00000610401 AIFM1O95831 613 aa19.07■□□□□ 0.64
SSBP3-216ENST00000610401 C1QBP02746 253 aa19.07■□□□□ 0.64
SSBP3-216ENST00000610401 SAGP10523 405 aaPredicted RBP19.07■□□□□ 0.64
SSBP3-216ENST00000610401 ZNF250P15622 560 aa19.07■□□□□ 0.64
SSBP3-216ENST00000610401 LRRC17Q8N6Y2 441 aa19.07■□□□□ 0.64
SSBP3-216ENST00000610401 ACOT4Q8N9L9 421 aa19.07■□□□□ 0.64
SSBP3-216ENST00000610401 CDS1Q92903 461 aa19.07■□□□□ 0.64
SSBP3-216ENST00000610401 RNF208Q9H0X6 261 aa19.07■□□□□ 0.64
SSBP3-216ENST00000610401 C20orf141Q9NUB4 165 aa19.07■□□□□ 0.64
SSBP3-216ENST00000610401 NOS3P29474 1203 aa19.07■□□□□ 0.64
SSBP3-216ENST00000610401 BCL6P41182 706 aa19.07■□□□□ 0.64
SSBP3-216ENST00000610401 KHKP50053 298 aa19.07■□□□□ 0.64
SSBP3-216ENST00000610401 ZNF81P51508 661 aa19.07■□□□□ 0.64
SSBP3-216ENST00000610401 CSNK1G2P78368 415 aa19.07■□□□□ 0.64
SSBP3-216ENST00000610401 BTN3A2P78410 334 aa19.07■□□□□ 0.64
SSBP3-216ENST00000610401 WDR45BQ5MNZ6 344 aa19.07■□□□□ 0.64
SSBP3-216ENST00000610401 VASNQ6EMK4 673 aa19.07■□□□□ 0.64
SSBP3-216ENST00000610401 MZT2AQ6P582 158 aa19.07■□□□□ 0.64
SSBP3-216ENST00000610401 FAM109AQ8N4B1 249 aa19.07■□□□□ 0.64
SSBP3-216ENST00000610401 CXorf40AQ8TE69 158 aa19.07■□□□□ 0.64
SSBP3-216ENST00000610401 FUZQ9BT04 418 aa19.07■□□□□ 0.64
SSBP3-216ENST00000610401 TAS2R7Q9NYW3 318 aa19.07■□□□□ 0.64
SSBP3-216ENST00000610401 EXOSC1Q9Y3B2 195 aaKnown RBP19.07■□□□□ 0.64
SSBP3-216ENST00000610401 CDH10Q9Y6N8 788 aa19.07■□□□□ 0.64
SSBP3-216ENST00000610401 IGKV1-8A0A0C4DH67 115 aa19.06■□□□□ 0.64
SSBP3-216ENST00000610401 TMEM129A0AVI4 362 aa19.06■□□□□ 0.64
SSBP3-216ENST00000610401 DNAJB6O75190 326 aa19.06■□□□□ 0.64
SSBP3-216ENST00000610401 THY1P04216 161 aa19.06■□□□□ 0.64
SSBP3-216ENST00000610401 PYCR1P32322 319 aa19.06■□□□□ 0.64
SSBP3-216ENST00000610401 CLDN20P56880 219 aa19.06■□□□□ 0.64
SSBP3-216ENST00000610401 CCDC28AQ8IWP9 274 aa19.06■□□□□ 0.64
SSBP3-216ENST00000610401 ADAMTS15Q8TE58 950 aa19.06■□□□□ 0.64
SSBP3-216ENST00000610401 RFT1Q96AA3 541 aa19.06■□□□□ 0.64
SSBP3-216ENST00000610401 MSANTD3Q96H12 275 aa19.06■□□□□ 0.64
SSBP3-216ENST00000610401 ZNF559Q9BR84 538 aa19.06■□□□□ 0.64
SSBP3-216ENST00000610401 GON7Q9BXV9 100 aa19.06■□□□□ 0.64
SSBP3-216ENST00000610401 ADAP2Q9NPF8 381 aa19.06■□□□□ 0.64
SSBP3-216ENST00000610401 FLVCR2Q9UPI3 526 aa19.06■□□□□ 0.64
SSBP3-216ENST00000610401 AP1M2Q9Y6Q5 423 aa19.06■□□□□ 0.64
SSBP3-216ENST00000610401 SSNA1O43805 119 aa19.06■□□□□ 0.64
SSBP3-216ENST00000610401 OR12D2P58182 307 aa19.06■□□□□ 0.64
SSBP3-216ENST00000610401 SIM1P81133 766 aaPredicted RBP19.06■□□□□ 0.64
SSBP3-216ENST00000610401 TRAM2Q15035 370 aa19.06■□□□□ 0.64
SSBP3-216ENST00000610401 ZNF322Q6U7Q0 402 aaPredicted RBP19.06■□□□□ 0.64
SSBP3-216ENST00000610401 LCTLQ6UWM7 567 aa19.06■□□□□ 0.64
SSBP3-216ENST00000610401 FBXL6Q8N531 539 aa19.06■□□□□ 0.64
SSBP3-216ENST00000610401 RFLNBQ8N5W9 214 aa19.06■□□□□ 0.64
SSBP3-216ENST00000610401 ZNF655Q8N720 491 aaPredicted RBP19.06■□□□□ 0.64
SSBP3-216ENST00000610401 OR11H7Q8NGC8 314 aa19.06■□□□□ 0.64
SSBP3-216ENST00000610401 GNPDA2Q8TDQ7 276 aa19.06■□□□□ 0.64
SSBP3-216ENST00000610401 GANCQ8TET4 914 aa19.06■□□□□ 0.64
SSBP3-216ENST00000610401 C19orf43Q9BQ61 176 aa19.06■□□□□ 0.64
SSBP3-216ENST00000610401 GSDMCQ9BYG8 508 aa19.06■□□□□ 0.64
SSBP3-216ENST00000610401 SLC38A1Q9H2H9 487 aa19.06■□□□□ 0.64
SSBP3-216ENST00000610401 MBNL1Q9NR56 388 aaKnown RBP19.06■□□□□ 0.64
SSBP3-216ENST00000610401 EIF3KQ9UBQ5 218 aaKnown RBP19.06■□□□□ 0.64
SSBP3-216ENST00000610401 NDOR1Q9UHB4 597 aa19.06■□□□□ 0.64
SSBP3-216ENST00000610401 TP53BP1Q12888 1972 aaPredicted RBP19.06■□□□□ 0.64
SSBP3-216ENST00000610401 CEP290O15078 2479 aa19.06■□□□□ 0.64
SSBP3-216ENST00000610401 TRDV1A0A1B0GX56 115 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms