RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 SERPIND1P05546 499 aa20.9■□□□□ 0.94
SHANK2-220ENST00000608988 C4BPBP20851 252 aa20.9■□□□□ 0.94
SHANK2-220ENST00000608988 TM4SF4P48230 202 aa20.9■□□□□ 0.94
SHANK2-220ENST00000608988 PRR5P85299 388 aa20.9■□□□□ 0.94
SHANK2-220ENST00000608988 GALEQ14376 348 aa20.9■□□□□ 0.94
SHANK2-220ENST00000608988 INSL4Q14641 139 aa20.9■□□□□ 0.94
SHANK2-220ENST00000608988 GRIN2CQ14957 1233 aa20.9■□□□□ 0.94
SHANK2-220ENST00000608988 SLC22A10Q63ZE4 541 aa20.9■□□□□ 0.94
SHANK2-220ENST00000608988 BTN2A1Q7KYR7 527 aa20.9■□□□□ 0.94
SHANK2-220ENST00000608988 MEPCEQ7L2J0 689 aaKnown RBP20.9■□□□□ 0.94
SHANK2-220ENST00000608988 FAM20CQ8IXL6 584 aa20.9■□□□□ 0.94
SHANK2-220ENST00000608988 TIGD4Q8IY51 512 aa20.9■□□□□ 0.94
SHANK2-220ENST00000608988 TOMM5Q8N4H5 51 aa20.9■□□□□ 0.94
SHANK2-220ENST00000608988 OR5AR1Q8NGP9 310 aa20.9■□□□□ 0.94
SHANK2-220ENST00000608988 OR8K5Q8NH50 307 aa20.9■□□□□ 0.94
SHANK2-220ENST00000608988 FCRL4Q96PJ5 515 aa20.9■□□□□ 0.94
SHANK2-220ENST00000608988 HINT3Q9NQE9 182 aaKnown RBP20.9■□□□□ 0.94
SHANK2-220ENST00000608988 TDP1Q9NUW8 608 aa20.9■□□□□ 0.94
SHANK2-220ENST00000608988 PRELID1Q9Y255 219 aa20.9■□□□□ 0.94
SHANK2-220ENST00000608988 NPTNQ9Y639 398 aa20.9■□□□□ 0.94
SHANK2-220ENST00000608988 DNMT3AQ9Y6K1 912 aaPredicted RBP20.9■□□□□ 0.94
SHANK2-220ENST00000608988 COL4A3Q01955 1670 aa20.9■□□□□ 0.94
SHANK2-220ENST00000608988 CPSF4LA6NMK7 179 aaKnown RBP20.9■□□□□ 0.94
SHANK2-220ENST00000608988 MEN1O00255 615 aa20.9■□□□□ 0.94
SHANK2-220ENST00000608988 PLPP2O43688 288 aa20.9■□□□□ 0.94
SHANK2-220ENST00000608988 GSTZ1O43708 216 aaPredicted RBP20.9■□□□□ 0.94
SHANK2-220ENST00000608988 MT-ND5P03915 603 aa20.9■□□□□ 0.94
SHANK2-220ENST00000608988 TMEM215Q68D42 235 aa20.9■□□□□ 0.94
SHANK2-220ENST00000608988 ADGRD2Q7Z7M1 963 aa20.9■□□□□ 0.94
SHANK2-220ENST00000608988 SIRT6Q8N6T7 355 aa20.9■□□□□ 0.94
SHANK2-220ENST00000608988 TRMT10AQ8TBZ6 339 aaKnown RBP20.9■□□□□ 0.94
SHANK2-220ENST00000608988 ACAT2Q9BWD1 397 aa20.9■□□□□ 0.94
SHANK2-220ENST00000608988 SPHK2Q9NRA0 654 aa20.9■□□□□ 0.94
SHANK2-220ENST00000608988 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.9■□□□□ 0.94
SHANK2-220ENST00000608988 TRAV6A0A075B6T7 132 aa20.89■□□□□ 0.93
SHANK2-220ENST00000608988 RPS10-NUDT3A0A1W2PQS6 291 aa20.89■□□□□ 0.93
SHANK2-220ENST00000608988 ANKRD61A6NGH8 418 aa20.89■□□□□ 0.93
SHANK2-220ENST00000608988 TEX28O15482 410 aa20.89■□□□□ 0.93
SHANK2-220ENST00000608988 EMC8O43402 210 aa20.89■□□□□ 0.93
SHANK2-220ENST00000608988 FZD7O75084 574 aa20.89■□□□□ 0.93
SHANK2-220ENST00000608988 CH25HO95992 272 aa20.89■□□□□ 0.93
SHANK2-220ENST00000608988 HMGN2P05204 90 aaKnown RBP20.89■□□□□ 0.93
SHANK2-220ENST00000608988 SSR2P43308 183 aa20.89■□□□□ 0.93
SHANK2-220ENST00000608988 RAB14P61106 215 aa20.89■□□□□ 0.93
SHANK2-220ENST00000608988 MLLT1Q03111 559 aaPredicted RBP20.89■□□□□ 0.93
SHANK2-220ENST00000608988 TGM3Q08188 693 aa20.89■□□□□ 0.93
SHANK2-220ENST00000608988 DYRK1AQ13627 763 aa20.89■□□□□ 0.93
SHANK2-220ENST00000608988 LASP1Q14847 261 aaKnown RBP20.89■□□□□ 0.93
SHANK2-220ENST00000608988 NIPAL3Q6P499 406 aa20.89■□□□□ 0.93
SHANK2-220ENST00000608988 PLEKHM3Q6ZWE6 761 aa20.89■□□□□ 0.93
SHANK2-220ENST00000608988 PXKQ7Z7A4 578 aa20.89■□□□□ 0.93
SHANK2-220ENST00000608988 ASPGQ86U10 573 aa20.89■□□□□ 0.93
SHANK2-220ENST00000608988 COMMD7Q86VX2 200 aa20.89■□□□□ 0.93
SHANK2-220ENST00000608988 CPOQ8IVL8 374 aa20.89■□□□□ 0.93
SHANK2-220ENST00000608988 ZNF366Q8N895 744 aa20.89■□□□□ 0.93
SHANK2-220ENST00000608988 BBS1Q8NFJ9 593 aa20.89■□□□□ 0.93
SHANK2-220ENST00000608988 OR5W2Q8NH69 310 aa20.89■□□□□ 0.93
SHANK2-220ENST00000608988 OR5K2Q8NHB8 316 aa20.89■□□□□ 0.93
SHANK2-220ENST00000608988 ABHD1Q96SE0 405 aa20.89■□□□□ 0.93
SHANK2-220ENST00000608988 C17orf62Q9BQA9 187 aa20.89■□□□□ 0.93
SHANK2-220ENST00000608988 SLC38A1Q9H2H9 487 aa20.89■□□□□ 0.93
SHANK2-220ENST00000608988 ABRACLQ9P1F3 81 aa20.89■□□□□ 0.93
SHANK2-220ENST00000608988 PLAGL1Q9UM63 463 aa20.89■□□□□ 0.93
SHANK2-220ENST00000608988 A0A0G2JK05 382 aa20.88■□□□□ 0.93
SHANK2-220ENST00000608988 I3L521 148 aa20.88■□□□□ 0.93
SHANK2-220ENST00000608988 CTDSPLO15194 276 aa20.88■□□□□ 0.93
SHANK2-220ENST00000608988 H2AFB2P0C5Z0 115 aa20.88■□□□□ 0.93
SHANK2-220ENST00000608988 DDX6P26196 483 aaKnown RBP eCLIP20.88■□□□□ 0.937e-6■■■□□ 16.4
SHANK2-220ENST00000608988 CAMK2DQ13557 499 aa20.88■□□□□ 0.93
SHANK2-220ENST00000608988 MFSD13AQ14CX5 517 aa20.88■□□□□ 0.93
SHANK2-220ENST00000608988 KRT74Q7RTS7 529 aa20.88■□□□□ 0.93
SHANK2-220ENST00000608988 MEX3DQ86XN8 651 aaKnown RBP20.88■□□□□ 0.93
SHANK2-220ENST00000608988 OR11H4Q8NGC9 324 aa20.88■□□□□ 0.93
SHANK2-220ENST00000608988 TFGQ92734 400 aaPredicted RBP20.88■□□□□ 0.93
SHANK2-220ENST00000608988 CACNG6Q9BXT2 260 aa20.88■□□□□ 0.93
SHANK2-220ENST00000608988 MFRPQ9BY79 579 aa20.88■□□□□ 0.93
SHANK2-220ENST00000608988 TMEM168Q9H0V1 697 aa20.88■□□□□ 0.93
SHANK2-220ENST00000608988 ISG20L2Q9H9L3 353 aaKnown RBP20.88■□□□□ 0.93
SHANK2-220ENST00000608988 SOCS6O14544 535 aa20.88■□□□□ 0.93
SHANK2-220ENST00000608988 SAGP10523 405 aaPredicted RBP20.88■□□□□ 0.93
SHANK2-220ENST00000608988 SHC1P29353 583 aa20.88■□□□□ 0.93
SHANK2-220ENST00000608988 TLE2Q04725 743 aa20.88■□□□□ 0.93
SHANK2-220ENST00000608988 GSG1Q2KHT4 349 aa20.88■□□□□ 0.93
SHANK2-220ENST00000608988 PIP5KL1Q5T9C9 394 aa20.88■□□□□ 0.93
SHANK2-220ENST00000608988 LYPD4Q6UWN0 246 aa20.88■□□□□ 0.93
SHANK2-220ENST00000608988 C11orf96Q7Z7L8 435 aa20.88■□□□□ 0.93
SHANK2-220ENST00000608988 ADGRG3Q86Y34 549 aa20.88■□□□□ 0.93
SHANK2-220ENST00000608988 OR51G2Q8NGK0 314 aa20.88■□□□□ 0.93
SHANK2-220ENST00000608988 OR56B4Q8NH76 319 aa20.88■□□□□ 0.93
SHANK2-220ENST00000608988 HAVCR2Q8TDQ0 301 aa20.88■□□□□ 0.93
SHANK2-220ENST00000608988 CYB5D2Q8WUJ1 264 aa20.88■□□□□ 0.93
SHANK2-220ENST00000608988 HSD17B8Q92506 261 aa20.88■□□□□ 0.93
SHANK2-220ENST00000608988 YIPF5Q969M3 257 aa20.88■□□□□ 0.93
SHANK2-220ENST00000608988 CMTM3Q96MX0 182 aa20.88■□□□□ 0.93
SHANK2-220ENST00000608988 OR7D2Q96RA2 312 aa20.88■□□□□ 0.93
SHANK2-220ENST00000608988 NDC1Q9BTX1 674 aa20.88■□□□□ 0.93
SHANK2-220ENST00000608988 C1QTNF2Q9BXJ5 285 aa20.88■□□□□ 0.93
SHANK2-220ENST00000608988 LYARQ9NX58 379 aaKnown RBP20.88■□□□□ 0.93
SHANK2-220ENST00000608988 DAPL1A0PJW8 107 aa20.87■□□□□ 0.93
SHANK2-220ENST00000608988 LRRN3E7EW58 273 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms