RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 AURKBQ96GD4 344 aaPredicted RBP13.03□□□□□ -0.32
CTSA-219ENST00000607841 GNRHR2Q96P88 292 aa13.03□□□□□ -0.32
CTSA-219ENST00000607841 TRNT1Q96Q11 434 aaKnown RBP13.03□□□□□ -0.32
CTSA-219ENST00000607841 CCT8L2Q96SF2 557 aa13.03□□□□□ -0.32
CTSA-219ENST00000607841 TSPAN10Q9H1Z9 355 aaPredicted RBP13.03□□□□□ -0.32
CTSA-219ENST00000607841 ZNF703Q9H7S9 590 aaPredicted RBP13.03□□□□□ -0.32
CTSA-219ENST00000607841 ZDHHC11Q9H8X9 412 aa13.03□□□□□ -0.32
CTSA-219ENST00000607841 FBXO34Q9NWN3 711 aa13.03□□□□□ -0.32
CTSA-219ENST00000607841 VAPAQ9P0L0 249 aa13.03□□□□□ -0.32
CTSA-219ENST00000607841 SLAMF8Q9P0V8 285 aa13.03□□□□□ -0.32
CTSA-219ENST00000607841 PPP4R1LQ9P1A2 415 aa13.03□□□□□ -0.32
CTSA-219ENST00000607841 ARMCX1Q9P291 453 aa13.03□□□□□ -0.32
CTSA-219ENST00000607841 P2RX2Q9UBL9 471 aa13.03□□□□□ -0.32
CTSA-219ENST00000607841 C15orf41Q9Y2V0 281 aa13.03□□□□□ -0.32
CTSA-219ENST00000607841 ARL2BPQ9Y2Y0 163 aa13.03□□□□□ -0.32
CTSA-219ENST00000607841 GMEB1Q9Y692 573 aa13.03□□□□□ -0.32
CTSA-219ENST00000607841 LOC100653049A0A140TA62 436 aa13.02□□□□□ -0.33
CTSA-219ENST00000607841 A0A1W2PQD3 144 aa13.02□□□□□ -0.33
CTSA-219ENST00000607841 C2orf72A6NCS6 295 aa13.02□□□□□ -0.33
CTSA-219ENST00000607841 NDUFB5O43674 189 aa13.02□□□□□ -0.33
CTSA-219ENST00000607841 CDC40O60508 579 aaKnown RBP eCLIP13.02□□□□□ -0.33
CTSA-219ENST00000607841 KRT34O76011 436 aa13.02□□□□□ -0.33
CTSA-219ENST00000607841 UNC5CO95185 931 aa13.02□□□□□ -0.33
CTSA-219ENST00000607841 ANGPTL1O95841 491 aa13.02□□□□□ -0.33
CTSA-219ENST00000607841 FAM107AO95990 144 aa13.02□□□□□ -0.33
CTSA-219ENST00000607841 NPPAP01160 153 aa13.02□□□□□ -0.33
CTSA-219ENST00000607841 NR2F1P10589 423 aa13.02□□□□□ -0.33
CTSA-219ENST00000607841 HOXB9P17482 250 aaPredicted RBP13.02□□□□□ -0.33
CTSA-219ENST00000607841 GDF1P27539 372 aa13.02□□□□□ -0.33
CTSA-219ENST00000607841 DCTP40126 519 aa13.02□□□□□ -0.33
CTSA-219ENST00000607841 MAGEA5P43359 124 aa13.02□□□□□ -0.33
CTSA-219ENST00000607841 MVDP53602 400 aa13.02□□□□□ -0.33
CTSA-219ENST00000607841 GAS1P54826 345 aa13.02□□□□□ -0.33
CTSA-219ENST00000607841 DSTNP60981 165 aa13.02□□□□□ -0.33
CTSA-219ENST00000607841 TOMM20Q15388 145 aa13.02□□□□□ -0.33
CTSA-219ENST00000607841 RGNQ15493 299 aa13.02□□□□□ -0.33
CTSA-219ENST00000607841 CMPK2Q5EBM0 449 aa13.02□□□□□ -0.33
CTSA-219ENST00000607841 COX20Q5RI15 118 aa13.02□□□□□ -0.33
CTSA-219ENST00000607841 GKAP1Q5VSY0 366 aaPredicted RBP13.02□□□□□ -0.33
CTSA-219ENST00000607841 FNDC7Q5VTL7 733 aa13.02□□□□□ -0.33
CTSA-219ENST00000607841 DLEU7Q6UYE1 221 aa13.02□□□□□ -0.33
CTSA-219ENST00000607841 ZAR1Q86SH2 424 aa13.02□□□□□ -0.33
CTSA-219ENST00000607841 MARCH3Q86UD3 253 aa13.02□□□□□ -0.33
CTSA-219ENST00000607841 RETREG3Q86VR2 466 aa13.02□□□□□ -0.33
CTSA-219ENST00000607841 SNX32Q86XE0 403 aa13.02□□□□□ -0.33
CTSA-219ENST00000607841 PMM1Q92871 262 aa13.02□□□□□ -0.33
CTSA-219ENST00000607841 ZNF350Q9GZX5 532 aa13.02□□□□□ -0.33
CTSA-219ENST00000607841 DEFB127Q9H1M4 99 aa13.02□□□□□ -0.33
CTSA-219ENST00000607841 LDAHQ9H6V9 325 aa13.02□□□□□ -0.33
CTSA-219ENST00000607841 ACKR4Q9NPB9 350 aa13.02□□□□□ -0.33
CTSA-219ENST00000607841 SLC25A37Q9NYZ2 338 aa13.02□□□□□ -0.33
CTSA-219ENST00000607841 CALML5Q9NZT1 146 aa13.02□□□□□ -0.33
CTSA-219ENST00000607841 FLRT3Q9NZU0 649 aa13.02□□□□□ -0.33
CTSA-219ENST00000607841 WDR45Q9Y484 360 aa13.02□□□□□ -0.33
CTSA-219ENST00000607841 TRBV5-3A0A0A0MS03 114 aa13.01□□□□□ -0.33
CTSA-219ENST00000607841 FCMRO60667 390 aa13.01□□□□□ -0.33
CTSA-219ENST00000607841 SHOX2O60902 331 aaPredicted RBP13.01□□□□□ -0.33
CTSA-219ENST00000607841 TRAPPC6AO75865 159 aa13.01□□□□□ -0.33
CTSA-219ENST00000607841 DCTN3O75935 186 aa13.01□□□□□ -0.33
CTSA-219ENST00000607841 C1QCP02747 245 aa13.01□□□□□ -0.33
CTSA-219ENST00000607841 RFPL3SP0C7P2 107 aa13.01□□□□□ -0.33
CTSA-219ENST00000607841 ETFAP13804 333 aa13.01□□□□□ -0.33
CTSA-219ENST00000607841 GPR68Q15743 365 aa13.01□□□□□ -0.33
CTSA-219ENST00000607841 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.01□□□□□ -0.33
CTSA-219ENST00000607841 RUNDC3AQ59EK9 446 aa13.01□□□□□ -0.33
CTSA-219ENST00000607841 AP1ARQ63HQ0 302 aa13.01□□□□□ -0.33
CTSA-219ENST00000607841 ARHGAP11AQ6P4F7 1023 aa13.01□□□□□ -0.33
CTSA-219ENST00000607841 LRRC74BQ6ZQY2 392 aa13.01□□□□□ -0.33
CTSA-219ENST00000607841 MTERF4Q7Z6M4 381 aaKnown RBP13.01□□□□□ -0.33
CTSA-219ENST00000607841 MSRB3Q8IXL7 192 aa13.01□□□□□ -0.33
CTSA-219ENST00000607841 WDSUB1Q8N9V3 476 aa13.01□□□□□ -0.33
CTSA-219ENST00000607841 OR4K17Q8NGC6 315 aa13.01□□□□□ -0.33
CTSA-219ENST00000607841 DUSP19Q8WTR2 217 aa13.01□□□□□ -0.33
CTSA-219ENST00000607841 CMTM5Q96DZ9 223 aa13.01□□□□□ -0.33
CTSA-219ENST00000607841 ANKRD27Q96NW4 1050 aa13.01□□□□□ -0.33
CTSA-219ENST00000607841 CGREF1Q99674 301 aa13.01□□□□□ -0.33
CTSA-219ENST00000607841 SH3GL1Q99961 368 aa13.01□□□□□ -0.33
CTSA-219ENST00000607841 CCDC106Q9BWC9 280 aa13.01□□□□□ -0.33
CTSA-219ENST00000607841 SAP130Q9H0E3 1048 aa13.01□□□□□ -0.33
CTSA-219ENST00000607841 UBQLN3Q9H347 655 aa13.01□□□□□ -0.33
CTSA-219ENST00000607841 EXO5Q9H790 373 aa13.01□□□□□ -0.33
CTSA-219ENST00000607841 PTGES2Q9H7Z7 377 aa13.01□□□□□ -0.33
CTSA-219ENST00000607841 GID8Q9NWU2 228 aa13.01□□□□□ -0.33
CTSA-219ENST00000607841 MKLN1Q9UL63 735 aa13.01□□□□□ -0.33
CTSA-219ENST00000607841 DTNAQ9Y4J8 743 aa13.01□□□□□ -0.33
CTSA-219ENST00000607841 SPENQ96T58 3664 aaKnown RBP13□□□□□ -0.33
CTSA-219ENST00000607841 FBP2O00757 339 aa13□□□□□ -0.33
CTSA-219ENST00000607841 MRASO14807 208 aa13□□□□□ -0.33
CTSA-219ENST00000607841 KIAA0513O60268 411 aa13□□□□□ -0.33
CTSA-219ENST00000607841 SUSD5O60279 629 aa13□□□□□ -0.33
CTSA-219ENST00000607841 HCN1O60741 890 aa13□□□□□ -0.33
CTSA-219ENST00000607841 PDE9AO76083 593 aa13□□□□□ -0.33
CTSA-219ENST00000607841 H6PDO95479 791 aa13□□□□□ -0.33
CTSA-219ENST00000607841 IGHG3P01860 377 aa13□□□□□ -0.33
CTSA-219ENST00000607841 HPNP05981 417 aa13□□□□□ -0.33
CTSA-219ENST00000607841 BMP2P12643 396 aa13□□□□□ -0.33
CTSA-219ENST00000607841 GPX2P18283 190 aa13□□□□□ -0.33
CTSA-219ENST00000607841 GNLYP22749 145 aa13□□□□□ -0.33
CTSA-219ENST00000607841 MSX1P28360 303 aa13□□□□□ -0.33
CTSA-219ENST00000607841 GCKP35557 465 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms