RNA–Protein interactions for RNA: ENST00000601253.5

SNRPA-209, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 519 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-209ENST00000601253 ZNF350Q9GZX5 532 aa12.6□□□□□ -0.39
SNRPA-209ENST00000601253 RAD21L1Q9H4I0 556 aa12.6□□□□□ -0.39
SNRPA-209ENST00000601253 SAR1AQ9NR31 198 aa12.6□□□□□ -0.39
SNRPA-209ENST00000601253 FBXO34Q9NWN3 711 aa12.6□□□□□ -0.39
SNRPA-209ENST00000601253 THUMPD1Q9NXG2 353 aaKnown RBP12.6□□□□□ -0.39
SNRPA-209ENST00000601253 FLRT3Q9NZU0 649 aa12.6□□□□□ -0.39
SNRPA-209ENST00000601253 PPP4R1LQ9P1A2 415 aa12.6□□□□□ -0.39
SNRPA-209ENST00000601253 OSGIN2Q9Y236 505 aa12.6□□□□□ -0.39
SNRPA-209ENST00000601253 NDUFAF1Q9Y375 327 aa12.6□□□□□ -0.39
SNRPA-209ENST00000601253 GMEB1Q9Y692 573 aa12.6□□□□□ -0.39
SNRPA-209ENST00000601253 TRGV5A0A0B4J1U4 118 aa12.59□□□□□ -0.39
SNRPA-209ENST00000601253 A0A1B0GTH9 108 aa12.59□□□□□ -0.39
SNRPA-209ENST00000601253 C2orf72A6NCS6 295 aa12.59□□□□□ -0.39
SNRPA-209ENST00000601253 NPIPB9F8W1W9 429 aa12.59□□□□□ -0.39
SNRPA-209ENST00000601253 HMGN4O00479 90 aa12.59□□□□□ -0.39
SNRPA-209ENST00000601253 AQP7O14520 342 aa12.59□□□□□ -0.39
SNRPA-209ENST00000601253 CCDC22O60826 627 aa12.59□□□□□ -0.39
SNRPA-209ENST00000601253 ANGPTL1O95841 491 aa12.59□□□□□ -0.39
SNRPA-209ENST00000601253 CELA3AP09093 270 aa12.59□□□□□ -0.39
SNRPA-209ENST00000601253 ABOP16442 354 aa12.59□□□□□ -0.39
SNRPA-209ENST00000601253 ENDOUP21128 410 aaKnown RBP12.59□□□□□ -0.39
SNRPA-209ENST00000601253 PTGS2P35354 604 aa12.59□□□□□ -0.39
SNRPA-209ENST00000601253 DCTP40126 519 aa12.59□□□□□ -0.39
SNRPA-209ENST00000601253 MVDP53602 400 aa12.59□□□□□ -0.39
SNRPA-209ENST00000601253 SEC24CP53992 1094 aa12.59□□□□□ -0.39
SNRPA-209ENST00000601253 ATP12AP54707 1039 aa12.59□□□□□ -0.39
SNRPA-209ENST00000601253 GYS2P54840 703 aa12.59□□□□□ -0.39
SNRPA-209ENST00000601253 CASP9P55211 416 aa12.59□□□□□ -0.39
SNRPA-209ENST00000601253 GNGT1P63211 74 aa12.59□□□□□ -0.39
SNRPA-209ENST00000601253 HPCAP84074 193 aa12.59□□□□□ -0.39
SNRPA-209ENST00000601253 SF3A3Q12874 501 aaKnown RBP eCLIP12.59□□□□□ -0.39
SNRPA-209ENST00000601253 MAPRE2Q15555 327 aa12.59□□□□□ -0.39
SNRPA-209ENST00000601253 Q6ZPB1 254 aaPredicted RBP12.59□□□□□ -0.39
SNRPA-209ENST00000601253 MTERF4Q7Z6M4 381 aaKnown RBP12.59□□□□□ -0.39
SNRPA-209ENST00000601253 GALNT10Q86SR1 603 aa12.59□□□□□ -0.39
SNRPA-209ENST00000601253 MARCH3Q86UD3 253 aa12.59□□□□□ -0.39
SNRPA-209ENST00000601253 CHERPQ8IWX8 916 aaKnown RBP12.59□□□□□ -0.39
SNRPA-209ENST00000601253 DPP10Q8N608 796 aa12.59□□□□□ -0.39
SNRPA-209ENST00000601253 FADS6Q8N9I5 356 aa12.59□□□□□ -0.39
SNRPA-209ENST00000601253 OR4K17Q8NGC6 315 aa12.59□□□□□ -0.39
SNRPA-209ENST00000601253 PMM1Q92871 262 aa12.59□□□□□ -0.39
SNRPA-209ENST00000601253 RAB8BQ92930 207 aa12.59□□□□□ -0.39
SNRPA-209ENST00000601253 ROPN1LQ96C74 230 aa12.59□□□□□ -0.39
SNRPA-209ENST00000601253 TRNT1Q96Q11 434 aaKnown RBP12.59□□□□□ -0.39
SNRPA-209ENST00000601253 OR2B2Q9GZK3 357 aa12.59□□□□□ -0.39
SNRPA-209ENST00000601253 LDAHQ9H6V9 325 aa12.59□□□□□ -0.39
SNRPA-209ENST00000601253 MRPS18CQ9Y3D5 142 aaKnown RBP12.59□□□□□ -0.39
SNRPA-209ENST00000601253 PCDHB14Q9Y5E9 798 aa12.59□□□□□ -0.39
SNRPA-209ENST00000601253 POLEQ07864 2286 aa12.58□□□□□ -0.4
SNRPA-209ENST00000601253 A0A1B0GUH1 482 aa12.58□□□□□ -0.4
SNRPA-209ENST00000601253 H3BNH8 94 aa12.58□□□□□ -0.4
SNRPA-209ENST00000601253 CLIC1O00299 241 aa12.58□□□□□ -0.4
SNRPA-209ENST00000601253 PRRG2O14669 202 aa12.58□□□□□ -0.4
SNRPA-209ENST00000601253 BCKDKO14874 412 aa12.58□□□□□ -0.4
SNRPA-209ENST00000601253 NDUFB5O43674 189 aa12.58□□□□□ -0.4
SNRPA-209ENST00000601253 KIAA0513O60268 411 aa12.58□□□□□ -0.4
SNRPA-209ENST00000601253 TRAPPC6AO75865 159 aa12.58□□□□□ -0.4
SNRPA-209ENST00000601253 PDE9AO76083 593 aa12.58□□□□□ -0.4
SNRPA-209ENST00000601253 DRD4P21917 467 aa12.58□□□□□ -0.4
SNRPA-209ENST00000601253 SRD5A2P31213 254 aa12.58□□□□□ -0.4
SNRPA-209ENST00000601253 GCKP35557 465 aa12.58□□□□□ -0.4
SNRPA-209ENST00000601253 HSF1Q00613 529 aa12.58□□□□□ -0.4
SNRPA-209ENST00000601253 KLF10Q13118 480 aa12.58□□□□□ -0.4
SNRPA-209ENST00000601253 FADDQ13158 208 aa12.58□□□□□ -0.4
SNRPA-209ENST00000601253 STX5Q13190 355 aa12.58□□□□□ -0.4
SNRPA-209ENST00000601253 GANABQ14697 944 aaKnown RBP12.58□□□□□ -0.4
SNRPA-209ENST00000601253 GTDC1Q4AE62 458 aa12.58□□□□□ -0.4
SNRPA-209ENST00000601253 C4orf17Q53FE4 359 aa12.58□□□□□ -0.4
SNRPA-209ENST00000601253 KLHL26Q53HC5 615 aa12.58□□□□□ -0.4
SNRPA-209ENST00000601253 COQ5Q5HYK3 327 aa12.58□□□□□ -0.4
SNRPA-209ENST00000601253 PAGE3Q5JUK9 113 aa12.58□□□□□ -0.4
SNRPA-209ENST00000601253 APOOLQ6UXV4 268 aa12.58□□□□□ -0.4
SNRPA-209ENST00000601253 FGD2Q7Z6J4 655 aa12.58□□□□□ -0.4
SNRPA-209ENST00000601253 CPLX4Q7Z7G2 160 aa12.58□□□□□ -0.4
SNRPA-209ENST00000601253 NEIL3Q8TAT5 605 aa12.58□□□□□ -0.4
SNRPA-209ENST00000601253 FAM57AQ8TBR7 257 aa12.58□□□□□ -0.4
SNRPA-209ENST00000601253 PNPT1Q8TCS8 783 aaKnown RBP12.58□□□□□ -0.4
SNRPA-209ENST00000601253 DUSP19Q8WTR2 217 aa12.58□□□□□ -0.4
SNRPA-209ENST00000601253 RELTQ969Z4 430 aa12.58□□□□□ -0.4
SNRPA-209ENST00000601253 SARAFQ96BY9 339 aa12.58□□□□□ -0.4
SNRPA-209ENST00000601253 ELAC2Q9BQ52 826 aaKnown RBP12.58□□□□□ -0.4
SNRPA-209ENST00000601253 RTN4RQ9BZR6 473 aa12.58□□□□□ -0.4
SNRPA-209ENST00000601253 SAP130Q9H0E3 1048 aa12.58□□□□□ -0.4
SNRPA-209ENST00000601253 EXO5Q9H790 373 aa12.58□□□□□ -0.4
SNRPA-209ENST00000601253 PTGES2Q9H7Z7 377 aa12.58□□□□□ -0.4
SNRPA-209ENST00000601253 FAM53CQ9NYF3 392 aa12.58□□□□□ -0.4
SNRPA-209ENST00000601253 SLC25A37Q9NYZ2 338 aa12.58□□□□□ -0.4
SNRPA-209ENST00000601253 P2RX2Q9UBL9 471 aa12.58□□□□□ -0.4
SNRPA-209ENST00000601253 CORO2BQ9UQ03 480 aa12.58□□□□□ -0.4
SNRPA-209ENST00000601253 WDR45Q9Y484 360 aa12.58□□□□□ -0.4
SNRPA-209ENST00000601253 DTNAQ9Y4J8 743 aa12.58□□□□□ -0.4
SNRPA-209ENST00000601253 LIPGQ9Y5X9 500 aa12.58□□□□□ -0.4
SNRPA-209ENST00000601253 CAPN7Q9Y6W3 813 aa12.58□□□□□ -0.4
SNRPA-209ENST00000601253 NUP214P35658 2090 aaPredicted RBP12.57□□□□□ -0.4
SNRPA-209ENST00000601253 TENM4Q6N022 2769 aa12.57□□□□□ -0.4
SNRPA-209ENST00000601253 TRBV5-3A0A0A0MS03 114 aa12.57□□□□□ -0.4
SNRPA-209ENST00000601253 CLEC18AA5D8T8 446 aa12.57□□□□□ -0.4
SNRPA-209ENST00000601253 BBIP1A8MTZ0 92 aa12.57□□□□□ -0.4
SNRPA-209ENST00000601253 SNX3O60493 162 aa12.57□□□□□ -0.4
SNRPA-209ENST00000601253 FCMRO60667 390 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms