RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 ITLN2Q8WWU7 325 aaPredicted RBP15.34■□□□□ 0.05
TRIM28-215ENST00000601150 PANX1Q96RD7 426 aa15.34■□□□□ 0.05
TRIM28-215ENST00000601150 EBF4Q9BQW3 602 aa15.34■□□□□ 0.05
TRIM28-215ENST00000601150 RTN4RQ9BZR6 473 aa15.34■□□□□ 0.05
TRIM28-215ENST00000601150 HHATLQ9HCP6 504 aa15.34■□□□□ 0.05
TRIM28-215ENST00000601150 MED4Q9NPJ6 270 aa15.34■□□□□ 0.05
TRIM28-215ENST00000601150 UBQLN4Q9NRR5 601 aa15.34■□□□□ 0.05
TRIM28-215ENST00000601150 FBXO34Q9NWN3 711 aa15.34■□□□□ 0.05
TRIM28-215ENST00000601150 FBXL2Q9UKC9 423 aa15.34■□□□□ 0.05
TRIM28-215ENST00000601150 ICE1Q9Y2F5 2266 aa15.34■□□□□ 0.05
TRIM28-215ENST00000601150 PCNX3Q9H6A9 2034 aa15.34■□□□□ 0.05
TRIM28-215ENST00000601150 EDF1O60869 148 aaKnown RBP15.33■□□□□ 0.04
TRIM28-215ENST00000601150 WDR1O75083 606 aa15.33■□□□□ 0.04
TRIM28-215ENST00000601150 OXSR1O95747 527 aaPredicted RBP15.33■□□□□ 0.04
TRIM28-215ENST00000601150 ANGPTL1O95841 491 aa15.33■□□□□ 0.04
TRIM28-215ENST00000601150 TBXA2RP21731 343 aa15.33■□□□□ 0.04
TRIM28-215ENST00000601150 ACVR2AP27037 513 aa15.33■□□□□ 0.04
TRIM28-215ENST00000601150 GCKP35557 465 aa15.33■□□□□ 0.04
TRIM28-215ENST00000601150 CHI3L1P36222 383 aaPredicted RBP15.33■□□□□ 0.04
TRIM28-215ENST00000601150 CRYZQ08257 329 aaKnown RBP15.33■□□□□ 0.04
TRIM28-215ENST00000601150 C17orf67Q0P5P2 114 aa15.33■□□□□ 0.04
TRIM28-215ENST00000601150 NHSL2Q5HYW2 709 aa15.33■□□□□ 0.04
TRIM28-215ENST00000601150 DCST2Q5T1A1 773 aa15.33■□□□□ 0.04
TRIM28-215ENST00000601150 SAXO2Q658L1 398 aa15.33■□□□□ 0.04
TRIM28-215ENST00000601150 VASNQ6EMK4 673 aa15.33■□□□□ 0.04
TRIM28-215ENST00000601150 TMEM211Q6ICI0 200 aa15.33■□□□□ 0.04
TRIM28-215ENST00000601150 APOOLQ6UXV4 268 aa15.33■□□□□ 0.04
TRIM28-215ENST00000601150 MAMDC2Q7Z304 686 aaPredicted RBP15.33■□□□□ 0.04
TRIM28-215ENST00000601150 MRGPRGQ86SM5 289 aa15.33■□□□□ 0.04
TRIM28-215ENST00000601150 ZNF808Q8N4W9 903 aaPredicted RBP15.33■□□□□ 0.04
TRIM28-215ENST00000601150 TRIML2Q8N7C3 387 aa15.33■□□□□ 0.04
TRIM28-215ENST00000601150 FADS6Q8N9I5 356 aa15.33■□□□□ 0.04
TRIM28-215ENST00000601150 OR2M3Q8NG83 312 aa15.33■□□□□ 0.04
TRIM28-215ENST00000601150 OR5D16Q8NGK9 328 aa15.33■□□□□ 0.04
TRIM28-215ENST00000601150 MIPOL1Q8TD10 442 aa15.33■□□□□ 0.04
TRIM28-215ENST00000601150 DUSP19Q8WTR2 217 aa15.33■□□□□ 0.04
TRIM28-215ENST00000601150 SLC35A5Q9BS91 424 aa15.33■□□□□ 0.04
TRIM28-215ENST00000601150 INPP5KQ9BT40 448 aa15.33■□□□□ 0.04
TRIM28-215ENST00000601150 DSN1Q9H410 356 aa15.33■□□□□ 0.04
TRIM28-215ENST00000601150 SERHL2Q9H4I8 314 aa15.33■□□□□ 0.04
TRIM28-215ENST00000601150 TAS2R10Q9NYW0 307 aa15.33■□□□□ 0.04
TRIM28-215ENST00000601150 PLEKHB1Q9UF11 243 aaPredicted RBP15.33■□□□□ 0.04
TRIM28-215ENST00000601150 DKKL1Q9UK85 242 aa15.33■□□□□ 0.04
TRIM28-215ENST00000601150 SLC6A5Q9Y345 797 aa15.33■□□□□ 0.04
TRIM28-215ENST00000601150 MRPS18CQ9Y3D5 142 aaKnown RBP15.33■□□□□ 0.04
TRIM28-215ENST00000601150 KCNE3Q9Y6H6 103 aa15.33■□□□□ 0.04
TRIM28-215ENST00000601150 PCNX1Q96RV3 2341 aa15.33■□□□□ 0.04
TRIM28-215ENST00000601150 COL12A1Q99715 3063 aa15.32■□□□□ 0.04
TRIM28-215ENST00000601150 CCDC154A6NI56 674 aa15.32■□□□□ 0.04
TRIM28-215ENST00000601150 C17orf51A8MQB3 221 aa15.32■□□□□ 0.04
TRIM28-215ENST00000601150 ALG1L2C9J202 215 aa15.32■□□□□ 0.04
TRIM28-215ENST00000601150 SCDO00767 359 aa15.32■□□□□ 0.04
TRIM28-215ENST00000601150 ATP8B1O43520 1251 aa15.32■□□□□ 0.04
TRIM28-215ENST00000601150 CLDN1O95832 211 aa15.32■□□□□ 0.04
TRIM28-215ENST00000601150 AGR2O95994 175 aa15.32■□□□□ 0.04
TRIM28-215ENST00000601150 ACTL6AO96019 429 aa15.32■□□□□ 0.04
TRIM28-215ENST00000601150 AK1P00568 194 aa15.32■□□□□ 0.04
TRIM28-215ENST00000601150 HOXD4P09016 255 aaPredicted RBP15.32■□□□□ 0.04
TRIM28-215ENST00000601150 GP1BBP13224 206 aa15.32■□□□□ 0.04
TRIM28-215ENST00000601150 GABRA1P14867 456 aa15.32■□□□□ 0.04
TRIM28-215ENST00000601150 HPGDP15428 266 aa15.32■□□□□ 0.04
TRIM28-215ENST00000601150 DPP4P27487 766 aa15.32■□□□□ 0.04
TRIM28-215ENST00000601150 MRPL19P49406 292 aaKnown RBP15.32■□□□□ 0.04
TRIM28-215ENST00000601150 POLR2JP52435 117 aaKnown RBP15.32■□□□□ 0.04
TRIM28-215ENST00000601150 DSCR4P56555 118 aaPredicted RBP15.32■□□□□ 0.04
TRIM28-215ENST00000601150 XKRXQ6PP77 449 aa15.32■□□□□ 0.04
TRIM28-215ENST00000601150 MSANTD1Q6ZTZ1 278 aa15.32■□□□□ 0.04
TRIM28-215ENST00000601150 NCCRP1Q6ZVX7 275 aaPredicted RBP15.32■□□□□ 0.04
TRIM28-215ENST00000601150 IFNEQ86WN2 208 aa15.32■□□□□ 0.04
TRIM28-215ENST00000601150 OR9I1Q8NGQ6 314 aa15.32■□□□□ 0.04
TRIM28-215ENST00000601150 STON2Q8WXE9 905 aa15.32■□□□□ 0.04
TRIM28-215ENST00000601150 NEURL3Q96EH8 262 aa15.32■□□□□ 0.04
TRIM28-215ENST00000601150 TIMP4Q99727 224 aa15.32■□□□□ 0.04
TRIM28-215ENST00000601150 HOXD1Q9GZZ0 328 aa15.32■□□□□ 0.04
TRIM28-215ENST00000601150 OR51I1Q9H343 314 aa15.32■□□□□ 0.04
TRIM28-215ENST00000601150 PTGES2Q9H7Z7 377 aa15.32■□□□□ 0.04
TRIM28-215ENST00000601150 MED11Q9P086 117 aa15.32■□□□□ 0.04
TRIM28-215ENST00000601150 FLNBO75369 2602 aaKnown RBP15.32■□□□□ 0.04
TRIM28-215ENST00000601150 IGLV3-32A0A0A0MS00 114 aa15.31■□□□□ 0.04
TRIM28-215ENST00000601150 FAM234BA2RU67 622 aa15.31■□□□□ 0.04
TRIM28-215ENST00000601150 B4DXG7 233 aa15.31■□□□□ 0.04
TRIM28-215ENST00000601150 RFXANKO14593 260 aa15.31■□□□□ 0.04
TRIM28-215ENST00000601150 NDUFB5O43674 189 aa15.31■□□□□ 0.04
TRIM28-215ENST00000601150 BMP7P18075 431 aa15.31■□□□□ 0.04
TRIM28-215ENST00000601150 AGAP20933 346 aa15.31■□□□□ 0.04
TRIM28-215ENST00000601150 PTGER4P35408 488 aa15.31■□□□□ 0.04
TRIM28-215ENST00000601150 CDKN2CP42773 168 aa15.31■□□□□ 0.04
TRIM28-215ENST00000601150 ZFP36L2P47974 494 aaKnown RBP15.31■□□□□ 0.04
TRIM28-215ENST00000601150 KHKP50053 298 aa15.31■□□□□ 0.04
TRIM28-215ENST00000601150 IRX1P78414 480 aaPredicted RBP15.31■□□□□ 0.04
TRIM28-215ENST00000601150 GANABQ14697 944 aaKnown RBP15.31■□□□□ 0.04
TRIM28-215ENST00000601150 C1orf185Q5T7R7 199 aa15.31■□□□□ 0.04
TRIM28-215ENST00000601150 ZNF621Q6ZSS3 439 aa15.31■□□□□ 0.04
TRIM28-215ENST00000601150 PM20D2Q8IYS1 436 aa15.31■□□□□ 0.04
TRIM28-215ENST00000601150 MARVELD2Q8N4S9 558 aa15.31■□□□□ 0.04
TRIM28-215ENST00000601150 ZNF527Q8NB42 609 aa15.31■□□□□ 0.04
TRIM28-215ENST00000601150 CHDHQ8NE62 594 aaPredicted RBP15.31■□□□□ 0.04
TRIM28-215ENST00000601150 ABTB1Q969K4 478 aaPredicted RBP15.31■□□□□ 0.04
TRIM28-215ENST00000601150 ITCHQ96J02 903 aa15.31■□□□□ 0.04
TRIM28-215ENST00000601150 SDF2Q99470 211 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms