RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 SDF2Q99470 211 aa10.71□□□□□ -0.69
CHMP2A-207ENST00000600804 HOXD1Q9GZZ0 328 aa10.71□□□□□ -0.69
CHMP2A-207ENST00000600804 LRMDAQ9H2I8 198 aa10.71□□□□□ -0.69
CHMP2A-207ENST00000600804 MMADHCQ9H3L0 296 aaPredicted RBP10.71□□□□□ -0.69
CHMP2A-207ENST00000600804 SH2D2AQ9NP31 389 aa10.71□□□□□ -0.69
CHMP2A-207ENST00000600804 STMN3Q9NZ72 180 aa10.71□□□□□ -0.69
CHMP2A-207ENST00000600804 ERRFI1Q9UJM3 462 aaPredicted RBP10.71□□□□□ -0.69
CHMP2A-207ENST00000600804 PCDHGA10Q9Y5H3 936 aa10.71□□□□□ -0.69
CHMP2A-207ENST00000600804 EML6Q6ZMW3 1958 aa10.7□□□□□ -0.7
CHMP2A-207ENST00000600804 DSPPQ9NZW4 1301 aa10.7□□□□□ -0.7
CHMP2A-207ENST00000600804 GXYLT2A0PJZ3 443 aa10.7□□□□□ -0.7
CHMP2A-207ENST00000600804 WIPF3A6NGB9 483 aa10.7□□□□□ -0.7
CHMP2A-207ENST00000600804 GYG2O15488 501 aa10.7□□□□□ -0.7
CHMP2A-207ENST00000600804 ZNF354AO60765 605 aaPredicted RBP10.7□□□□□ -0.7
CHMP2A-207ENST00000600804 NUDT7P0C024 238 aa10.7□□□□□ -0.7
CHMP2A-207ENST00000600804 HTR1EP28566 365 aa10.7□□□□□ -0.7
CHMP2A-207ENST00000600804 PCGF2P35227 344 aa10.7□□□□□ -0.7
CHMP2A-207ENST00000600804 HLCSP50747 726 aa10.7□□□□□ -0.7
CHMP2A-207ENST00000600804 CCL11P51671 97 aa10.7□□□□□ -0.7
CHMP2A-207ENST00000600804 CRISP3P54108 245 aa10.7□□□□□ -0.7
CHMP2A-207ENST00000600804 PCBP3P57721 371 aaKnown RBP10.7□□□□□ -0.7
CHMP2A-207ENST00000600804 CDK6Q00534 326 aa10.7□□□□□ -0.7
CHMP2A-207ENST00000600804 LIPEQ05469 1076 aa10.7□□□□□ -0.7
CHMP2A-207ENST00000600804 PLCXD2Q0VAA5 305 aa10.7□□□□□ -0.7
CHMP2A-207ENST00000600804 INPP5JQ15735 1006 aaPredicted RBP10.7□□□□□ -0.7
CHMP2A-207ENST00000600804 MAPK11Q15759 364 aa10.7□□□□□ -0.7
CHMP2A-207ENST00000600804 CYP51A1Q16850 503 aa10.7□□□□□ -0.7
CHMP2A-207ENST00000600804 VMACQ2NL98 169 aa10.7□□□□□ -0.7
CHMP2A-207ENST00000600804 B3GNTL1Q67FW5 361 aaPredicted RBP10.7□□□□□ -0.7
CHMP2A-207ENST00000600804 ASRGL1Q7L266 308 aa10.7□□□□□ -0.7
CHMP2A-207ENST00000600804 C16orf62Q7Z3J2 963 aa10.7□□□□□ -0.7
CHMP2A-207ENST00000600804 WDR53Q7Z5U6 358 aaPredicted RBP10.7□□□□□ -0.7
CHMP2A-207ENST00000600804 ZZZ3Q8IYH5 903 aa10.7□□□□□ -0.7
CHMP2A-207ENST00000600804 RBMXL3Q8N7X1 1067 aaKnown RBP10.7□□□□□ -0.7
CHMP2A-207ENST00000600804 HIPK4Q8NE63 616 aa10.7□□□□□ -0.7
CHMP2A-207ENST00000600804 OR2T12Q8NG77 320 aa10.7□□□□□ -0.7
CHMP2A-207ENST00000600804 OR4N2Q8NGD1 307 aa10.7□□□□□ -0.7
CHMP2A-207ENST00000600804 FBXO30Q8TB52 745 aa10.7□□□□□ -0.7
CHMP2A-207ENST00000600804 THAP3Q8WTV1 239 aaPredicted RBP10.7□□□□□ -0.7
CHMP2A-207ENST00000600804 ASB15Q8WXK1 588 aa10.7□□□□□ -0.7
CHMP2A-207ENST00000600804 PIK3R3Q92569 461 aa10.7□□□□□ -0.7
CHMP2A-207ENST00000600804 RAB8BQ92930 207 aa10.7□□□□□ -0.7
CHMP2A-207ENST00000600804 RMND5BQ96G75 393 aaPredicted RBP10.7□□□□□ -0.7
CHMP2A-207ENST00000600804 CDRT15Q96T59 188 aa10.7□□□□□ -0.7
CHMP2A-207ENST00000600804 SLC38A1Q9H2H9 487 aa10.7□□□□□ -0.7
CHMP2A-207ENST00000600804 ALG2Q9H553 416 aa10.7□□□□□ -0.7
CHMP2A-207ENST00000600804 SUCOQ9UBS9 1254 aaKnown RBP10.7□□□□□ -0.7
CHMP2A-207ENST00000600804 ABCG2Q9UNQ0 655 aa10.7□□□□□ -0.7
CHMP2A-207ENST00000600804 KCNE3Q9Y6H6 103 aa10.7□□□□□ -0.7
CHMP2A-207ENST00000600804 C2CD3Q4AC94 2353 aa10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 ZFHX3Q15911 3703 aa10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 A0A0G2JPF8 293 aa10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 ELOVL7A1L3X0 281 aa10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 ANKRD33BA6NCL7 494 aa10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 PRORSD1PA6NEY8 169 aa10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 HNRNPCL2B2RXH8 293 aa10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 HNRNPCL3B7ZW38 293 aa10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 NPIPB9F8W1W9 429 aa10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 TP53I11O14683 189 aa10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 KIAA0513O60268 411 aa10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 MAN1A2O60476 641 aa10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 STX11O75558 287 aa10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 DNAJC8O75937 253 aaPredicted RBP10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 OR6B1O95007 311 aa10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 LDLRP01130 860 aa10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 IGKV1D-16P01601 117 aa10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 CHRM4P08173 479 aa10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 HNRNPCL4P0DMR1 293 aa10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 NR2F1P10589 423 aa10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 ETS2P15036 469 aa10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 KRT20P35900 424 aa10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 SOX3P41225 446 aa10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 CYB561P49447 251 aa10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 GSK3BP49841 420 aa10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 CASP9P55211 416 aa10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 NCALDP61601 193 aa10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 RPP38P78345 283 aaKnown RBP10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 SNTA1Q13424 505 aa10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 ELOAQ14241 798 aaKnown RBP10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 NNATQ16517 81 aa10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 ZSCAN26Q16670 478 aa10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 INTS11Q5TA45 600 aaKnown RBP10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 TYW3Q6IPR3 259 aaKnown RBP10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 REEP3Q6NUK4 255 aa10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 PGM2L1Q6PCE3 622 aa10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 FRRS1Q6ZNA5 592 aa10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 C16orf47Q6ZP98 133 aaPredicted RBP10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 CCDC80Q76M96 950 aa10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 BEST3Q8N1M1 668 aa10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 TMEM156Q8N614 296 aa10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 OR52E4Q8NGH9 312 aa10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 BBS10Q8TAM1 723 aa10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 PAQR8Q8TEZ7 354 aa10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 TM9SF4Q92544 642 aa10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 HGDQ93099 445 aa10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 NTNG2Q96CW9 530 aa10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 TMEM19Q96HH6 336 aa10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 COL21A1Q96P44 957 aa10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 TREX2Q9BQ50 279 aaPredicted RBP10.69□□□□□ -0.7
CHMP2A-207ENST00000600804 UTP23Q9BRU9 249 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms