RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 ATG16L1Q676U5 607 aa13.72□□□□□ -0.21
TGFB1-202ENST00000597453 TMEM107Q6UX40 140 aa13.72□□□□□ -0.21
TGFB1-202ENST00000597453 PAMR1Q6UXH9 720 aa13.72□□□□□ -0.21
TGFB1-202ENST00000597453 LUZP2Q86TE4 346 aa13.72□□□□□ -0.21
TGFB1-202ENST00000597453 TGIF2LYQ8IUE0 185 aa13.72□□□□□ -0.21
TGFB1-202ENST00000597453 WNT2BQ93097 391 aa13.72□□□□□ -0.21
TGFB1-202ENST00000597453 EGLN2Q96KS0 407 aa13.72□□□□□ -0.21
TGFB1-202ENST00000597453 TM9SF2Q99805 663 aa13.72□□□□□ -0.21
TGFB1-202ENST00000597453 RBM24Q9BX46 236 aaKnown RBP13.72□□□□□ -0.21
TGFB1-202ENST00000597453 RTN4RQ9BZR6 473 aa13.72□□□□□ -0.21
TGFB1-202ENST00000597453 THAP1Q9NVV9 213 aa13.72□□□□□ -0.21
TGFB1-202ENST00000597453 ZNF446Q9NWS9 450 aa13.72□□□□□ -0.21
TGFB1-202ENST00000597453 GALNT8Q9NY28 637 aa13.72□□□□□ -0.21
TGFB1-202ENST00000597453 GIMAP2Q9UG22 337 aa13.72□□□□□ -0.21
TGFB1-202ENST00000597453 DKKL1Q9UK85 242 aa13.72□□□□□ -0.21
TGFB1-202ENST00000597453 OR10H1Q9Y4A9 318 aa13.72□□□□□ -0.21
TGFB1-202ENST00000597453 A0A087WV62 115 aa13.71□□□□□ -0.21
TGFB1-202ENST00000597453 KLF11O14901 512 aa13.71□□□□□ -0.21
TGFB1-202ENST00000597453 TBX19O60806 448 aa13.71□□□□□ -0.21
TGFB1-202ENST00000597453 COQ9O75208 318 aa13.71□□□□□ -0.21
TGFB1-202ENST00000597453 SASH3O75995 380 aa13.71□□□□□ -0.21
TGFB1-202ENST00000597453 PSMG1O95456 288 aa13.71□□□□□ -0.21
TGFB1-202ENST00000597453 TGM6O95932 706 aa13.71□□□□□ -0.21
TGFB1-202ENST00000597453 BCKDHAP12694 445 aa13.71□□□□□ -0.21
TGFB1-202ENST00000597453 DNASE1P24855 282 aa13.71□□□□□ -0.21
TGFB1-202ENST00000597453 EVI2BP34910 448 aa13.71□□□□□ -0.21
TGFB1-202ENST00000597453 ASMTP46597 345 aa13.71□□□□□ -0.21
TGFB1-202ENST00000597453 PSPHP78330 225 aa13.71□□□□□ -0.21
TGFB1-202ENST00000597453 DMTNQ08495 405 aa13.71□□□□□ -0.21
TGFB1-202ENST00000597453 SMU1Q2TAY7 513 aa13.71□□□□□ -0.21
TGFB1-202ENST00000597453 C6orf136Q5SQH8 315 aa13.71□□□□□ -0.21
TGFB1-202ENST00000597453 AAGABQ6PD74 315 aa13.71□□□□□ -0.21
TGFB1-202ENST00000597453 FADS6Q8N9I5 356 aa13.71□□□□□ -0.21
TGFB1-202ENST00000597453 FNDC5Q8NAU1 212 aa13.71□□□□□ -0.21
TGFB1-202ENST00000597453 TUBGCP3Q96CW5 907 aa13.71□□□□□ -0.21
TGFB1-202ENST00000597453 ZFP3Q96NJ6 502 aa13.71□□□□□ -0.21
TGFB1-202ENST00000597453 TSSK3Q96PN8 268 aa13.71□□□□□ -0.21
TGFB1-202ENST00000597453 GLIPR2Q9H4G4 154 aa13.71□□□□□ -0.21
TGFB1-202ENST00000597453 C19orf53Q9UNZ5 99 aaPredicted RBP13.71□□□□□ -0.21
TGFB1-202ENST00000597453 MRPS18CQ9Y3D5 142 aaKnown RBP13.71□□□□□ -0.21
TGFB1-202ENST00000597453 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.7□□□□□ -0.22
TGFB1-202ENST00000597453 UPK1AO00322 258 aa13.7□□□□□ -0.22
TGFB1-202ENST00000597453 HCRTR2O43614 444 aa13.7□□□□□ -0.22
TGFB1-202ENST00000597453 FADS1O60427 444 aa13.7□□□□□ -0.22
TGFB1-202ENST00000597453 TNFSF13O75888 250 aa13.7□□□□□ -0.22
TGFB1-202ENST00000597453 SLITRK5O94991 958 aa13.7□□□□□ -0.22
TGFB1-202ENST00000597453 CHMP24386 653 aa13.7□□□□□ -0.22
TGFB1-202ENST00000597453 NTSP30990 170 aa13.7□□□□□ -0.22
TGFB1-202ENST00000597453 MRPS22P82650 360 aaKnown RBP13.7□□□□□ -0.22
TGFB1-202ENST00000597453 OCRLQ01968 901 aa13.7□□□□□ -0.22
TGFB1-202ENST00000597453 MAD2L1Q13257 205 aaPredicted RBP13.7□□□□□ -0.22
TGFB1-202ENST00000597453 GAB1Q13480 694 aa13.7□□□□□ -0.22
TGFB1-202ENST00000597453 PDE7AQ13946 482 aa13.7□□□□□ -0.22
TGFB1-202ENST00000597453 POU4F3Q15319 338 aa13.7□□□□□ -0.22
TGFB1-202ENST00000597453 FBXW10Q5XX13 1052 aa13.7□□□□□ -0.22
TGFB1-202ENST00000597453 GRAMD2AQ8IUY3 354 aa13.7□□□□□ -0.22
TGFB1-202ENST00000597453 OR2L13Q8N349 312 aa13.7□□□□□ -0.22
TGFB1-202ENST00000597453 CHDHQ8NE62 594 aaPredicted RBP13.7□□□□□ -0.22
TGFB1-202ENST00000597453 OR2M3Q8NG83 312 aa13.7□□□□□ -0.22
TGFB1-202ENST00000597453 OR4K17Q8NGC6 315 aa13.7□□□□□ -0.22
TGFB1-202ENST00000597453 AMDHD1Q96NU7 426 aa13.7□□□□□ -0.22
TGFB1-202ENST00000597453 ACBD3Q9H3P7 528 aa13.7□□□□□ -0.22
TGFB1-202ENST00000597453 DSN1Q9H410 356 aa13.7□□□□□ -0.22
TGFB1-202ENST00000597453 REEP4Q9H6H4 257 aa13.7□□□□□ -0.22
TGFB1-202ENST00000597453 MANSC1Q9H8J5 431 aa13.7□□□□□ -0.22
TGFB1-202ENST00000597453 PLEKHF2Q9H8W4 249 aa13.7□□□□□ -0.22
TGFB1-202ENST00000597453 ASIC5Q9NY37 505 aa13.7□□□□□ -0.22
TGFB1-202ENST00000597453 PPP4R1LQ9P1A2 415 aa13.7□□□□□ -0.22
TGFB1-202ENST00000597453 A0A1W2PNV4 684 aa13.69□□□□□ -0.22
TGFB1-202ENST00000597453 A0A1W2PPR1 153 aa13.69□□□□□ -0.22
TGFB1-202ENST00000597453 H0YC42 278 aa13.69□□□□□ -0.22
TGFB1-202ENST00000597453 ATE1O95260 518 aa13.69□□□□□ -0.22
TGFB1-202ENST00000597453 HRGP04196 525 aa13.69□□□□□ -0.22
TGFB1-202ENST00000597453 PRPS2P11908 318 aa13.69□□□□□ -0.22
TGFB1-202ENST00000597453 KLK2P20151 261 aa13.69□□□□□ -0.22
TGFB1-202ENST00000597453 HPCAL1P37235 193 aa13.69□□□□□ -0.22
TGFB1-202ENST00000597453 CPA2P48052 419 aa13.69□□□□□ -0.22
TGFB1-202ENST00000597453 TPD52P55327 224 aaPredicted RBP13.69□□□□□ -0.22
TGFB1-202ENST00000597453 DSCR4P56555 118 aaPredicted RBP13.69□□□□□ -0.22
TGFB1-202ENST00000597453 CLDN15P56746 228 aa13.69□□□□□ -0.22
TGFB1-202ENST00000597453 EMX2Q04743 252 aa13.69□□□□□ -0.22
TGFB1-202ENST00000597453 STX5Q13190 355 aa13.69□□□□□ -0.22
TGFB1-202ENST00000597453 CYP27C1Q4G0S4 372 aa13.69□□□□□ -0.22
TGFB1-202ENST00000597453 UBQLNLQ8IYU4 475 aa13.69□□□□□ -0.22
TGFB1-202ENST00000597453 LRRC34Q8IZ02 419 aa13.69□□□□□ -0.22
TGFB1-202ENST00000597453 OR5M1Q8NGP8 315 aa13.69□□□□□ -0.22
TGFB1-202ENST00000597453 CLHC1Q8NHS4 586 aa13.69□□□□□ -0.22
TGFB1-202ENST00000597453 GFM2Q969S9 779 aaKnown RBP13.69□□□□□ -0.22
TGFB1-202ENST00000597453 PPCDCQ96CD2 204 aa13.69□□□□□ -0.22
TGFB1-202ENST00000597453 MBD6Q96DN6 1003 aa13.69□□□□□ -0.22
TGFB1-202ENST00000597453 MTERF3Q96E29 417 aa13.69□□□□□ -0.22
TGFB1-202ENST00000597453 ELP4Q96EB1 424 aa13.69□□□□□ -0.22
TGFB1-202ENST00000597453 ALPK1Q96QP1 1244 aa13.69□□□□□ -0.22
TGFB1-202ENST00000597453 YIPF4Q9BSR8 244 aa13.69□□□□□ -0.22
TGFB1-202ENST00000597453 C1orf50Q9BV19 199 aa13.69□□□□□ -0.22
TGFB1-202ENST00000597453 NUF2Q9BZD4 464 aa13.69□□□□□ -0.22
TGFB1-202ENST00000597453 MEAF6Q9HAF1 191 aa13.69□□□□□ -0.22
TGFB1-202ENST00000597453 DDX18Q9NVP1 670 aaKnown RBP13.69□□□□□ -0.22
TGFB1-202ENST00000597453 PNPOQ9NVS9 261 aa13.69□□□□□ -0.22
TGFB1-202ENST00000597453 NOP53Q9NZM5 478 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms