RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 C1orf146Q5VVC0 180 aa11.11□□□□□ -0.63
SHKBP1-213ENST00000597325 PGM2L1Q6PCE3 622 aa11.11□□□□□ -0.63
SHKBP1-213ENST00000597325 NPSR1Q6W5P4 371 aa11.11□□□□□ -0.63
SHKBP1-213ENST00000597325 PTOV1Q86YD1 416 aa11.11□□□□□ -0.63
SHKBP1-213ENST00000597325 TAGAPQ8N103 731 aa11.11□□□□□ -0.63
SHKBP1-213ENST00000597325 SLC5A8Q8N695 610 aa11.11□□□□□ -0.63
SHKBP1-213ENST00000597325 SLC22A8Q8TCC7 542 aa11.11□□□□□ -0.63
SHKBP1-213ENST00000597325 ELP5Q8TE02 316 aa11.11□□□□□ -0.63
SHKBP1-213ENST00000597325 FIG4Q92562 907 aa11.11□□□□□ -0.63
SHKBP1-213ENST00000597325 PIK3R3Q92569 461 aa11.11□□□□□ -0.63
SHKBP1-213ENST00000597325 HOXB13Q92826 284 aaPredicted RBP11.11□□□□□ -0.63
SHKBP1-213ENST00000597325 ASB9Q96DX5 294 aa11.11□□□□□ -0.63
SHKBP1-213ENST00000597325 RMND5BQ96G75 393 aaPredicted RBP11.11□□□□□ -0.63
SHKBP1-213ENST00000597325 SLC35A4Q96G79 324 aa11.11□□□□□ -0.63
SHKBP1-213ENST00000597325 LRGUKQ96M69 825 aa11.11□□□□□ -0.63
SHKBP1-213ENST00000597325 TRNT1Q96Q11 434 aaKnown RBP11.11□□□□□ -0.63
SHKBP1-213ENST00000597325 REPIN1Q9BWE0 567 aaKnown RBP11.11□□□□□ -0.63
SHKBP1-213ENST00000597325 EGFL7Q9UHF1 273 aa11.11□□□□□ -0.63
SHKBP1-213ENST00000597325 SLC7A8Q9UHI5 535 aa11.11□□□□□ -0.63
SHKBP1-213ENST00000597325 ZNF223Q9UK11 482 aaPredicted RBP11.11□□□□□ -0.63
SHKBP1-213ENST00000597325 CBLCQ9ULV8 474 aa11.11□□□□□ -0.63
SHKBP1-213ENST00000597325 USP22Q9UPT9 525 aa11.11□□□□□ -0.63
SHKBP1-213ENST00000597325 GPR55Q9Y2T6 319 aaPredicted RBP11.11□□□□□ -0.63
SHKBP1-213ENST00000597325 CCDC88CQ9P219 2028 aa11.11□□□□□ -0.63
SHKBP1-213ENST00000597325 ANKRD65E5RJM6 399 aa11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 CXCR6O00574 342 aa11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 PDE9AO76083 593 aa11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 NADKO95544 446 aaPredicted RBP11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 SERPINA7P05543 415 aa11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 CELA2AP08217 269 aa11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 CT45A8P0DMV1 189 aa11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 CT45A9P0DMV2 189 aa11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 GGT1P19440 569 aa11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 IL12BP29460 328 aa11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 MSX2P35548 267 aaPredicted RBP11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 MAP3K8P41279 467 aa11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 RFX3P48380 749 aa11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 NR0B1P51843 470 aaKnown RBP11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 PSMD4P55036 377 aaKnown RBP11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 MRPS22P82650 360 aaKnown RBP11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 PSG6Q00889 435 aa11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 PLCXD2Q0VAA5 305 aa11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 VEZF1Q14119 521 aa11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 ELOAQ14241 798 aaKnown RBP11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 FLOT2Q14254 428 aa11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 TRIM25Q14258 630 aaKnown RBP11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 ADRM1Q16186 407 aa11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 SYPL1Q16563 259 aa11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 DECR1Q16698 335 aa11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 ARHGAP11BQ3KRB8 267 aa11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 CYP27C1Q4G0S4 372 aa11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 CT45A2Q5DJT8 189 aa11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 CRB2Q5IJ48 1285 aa11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 DCAF10Q5QP82 559 aa11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 REEP3Q6NUK4 255 aa11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 DHFR2Q86XF0 187 aa11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 KRT73Q86Y46 540 aa11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 ANKFN1Q8N957 763 aa11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 CHDHQ8NE62 594 aaPredicted RBP11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 BBS10Q8TAM1 723 aa11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 THAP3Q8WTV1 239 aaPredicted RBP11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 SLC38A5Q8WUX1 472 aa11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 FAM162AQ96A26 154 aa11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 ADIPOR1Q96A54 375 aa11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 TP53INP1Q96A56 240 aa11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 HSPBAP1Q96EW2 488 aa11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 TMEM19Q96HH6 336 aa11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 G6PC3Q9BUM1 346 aa11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 NXF5Q9H1B4 397 aaKnown RBP11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 TRIM45Q9H8W5 580 aaPredicted RBP11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 ATP13A2Q9NQ11 1180 aa11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 GMPR2Q9P2T1 348 aaKnown RBP11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 KLF2Q9Y5W3 355 aaPredicted RBP11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 KCNE3Q9Y6H6 103 aa11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 NSD1Q96L73 2696 aaPredicted RBP11.1□□□□□ -0.63
SHKBP1-213ENST00000597325 GXYLT2A0PJZ3 443 aa11.09□□□□□ -0.63
SHKBP1-213ENST00000597325 WWP2O00308 870 aa11.09□□□□□ -0.63
SHKBP1-213ENST00000597325 ARPC2O15144 300 aa11.09□□□□□ -0.63
SHKBP1-213ENST00000597325 STX11O75558 287 aa11.09□□□□□ -0.63
SHKBP1-213ENST00000597325 H6PDO95479 791 aa11.09□□□□□ -0.63
SHKBP1-213ENST00000597325 IFNA14P01570 189 aa11.09□□□□□ -0.63
SHKBP1-213ENST00000597325 TFPTP0C1Z6 253 aa11.09□□□□□ -0.63
SHKBP1-213ENST00000597325 ITGAMP11215 1152 aa11.09□□□□□ -0.63
SHKBP1-213ENST00000597325 NCK1P16333 377 aa11.09□□□□□ -0.63
SHKBP1-213ENST00000597325 AQP1P29972 269 aa11.09□□□□□ -0.63
SHKBP1-213ENST00000597325 PIGAP37287 484 aa11.09□□□□□ -0.63
SHKBP1-213ENST00000597325 TMED10P49755 219 aaKnown RBP11.09□□□□□ -0.63
SHKBP1-213ENST00000597325 FUT5Q11128 374 aa11.09□□□□□ -0.63
SHKBP1-213ENST00000597325 TRAP1Q12931 704 aaKnown RBP11.09□□□□□ -0.63
SHKBP1-213ENST00000597325 CHAF1BQ13112 559 aa11.09□□□□□ -0.63
SHKBP1-213ENST00000597325 PLEKHN1Q494U1 663 aaPredicted RBP11.09□□□□□ -0.63
SHKBP1-213ENST00000597325 LRRC23Q53EV4 343 aaPredicted RBP11.09□□□□□ -0.63
SHKBP1-213ENST00000597325 RPS26P11Q5JNZ5 115 aaPredicted RBP11.09□□□□□ -0.63
SHKBP1-213ENST00000597325 PRAMEF8Q5VWM4 474 aa11.09□□□□□ -0.63
SHKBP1-213ENST00000597325 PRAMEF7Q5VXH5 474 aa11.09□□□□□ -0.63
SHKBP1-213ENST00000597325 HEPHL1Q6MZM0 1159 aa11.09□□□□□ -0.63
SHKBP1-213ENST00000597325 FIGNL1Q6PIW4 674 aa11.09□□□□□ -0.63
SHKBP1-213ENST00000597325 PATL1Q86TB9 770 aaKnown RBP11.09□□□□□ -0.63
SHKBP1-213ENST00000597325 CDH24Q86UP0 819 aa11.09□□□□□ -0.63
SHKBP1-213ENST00000597325 CISD2Q8N5K1 135 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms