RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 KCNK2O95069 426 aa11.79□□□□□ -0.52
LIG1-212ENST00000596549 RCBTB2O95199 551 aa11.79□□□□□ -0.52
LIG1-212ENST00000596549 ANGPTL1O95841 491 aa11.79□□□□□ -0.52
LIG1-212ENST00000596549 TGM6O95932 706 aa11.79□□□□□ -0.52
LIG1-212ENST00000596549 IL18BPO95998 194 aa11.79□□□□□ -0.52
LIG1-212ENST00000596549 DHRS4L1P0CG22 281 aa11.79□□□□□ -0.52
LIG1-212ENST00000596549 HK1P19367 917 aa11.79□□□□□ -0.52
LIG1-212ENST00000596549 MAPK1P28482 360 aa11.79□□□□□ -0.52
LIG1-212ENST00000596549 PSMD4P55036 377 aaKnown RBP11.79□□□□□ -0.52
LIG1-212ENST00000596549 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.79□□□□□ -0.52
LIG1-212ENST00000596549 CCNJQ5T5M9 372 aa11.79□□□□□ -0.52
LIG1-212ENST00000596549 IL23RQ5VWK5 629 aa11.79□□□□□ -0.52
LIG1-212ENST00000596549 LRIG3Q6UXM1 1119 aa11.79□□□□□ -0.52
LIG1-212ENST00000596549 R3HCC1LQ7Z5L2 792 aaKnown RBP11.79□□□□□ -0.52
LIG1-212ENST00000596549 RIMKLAQ8IXN7 391 aa11.79□□□□□ -0.52
LIG1-212ENST00000596549 UBQLNLQ8IYU4 475 aa11.79□□□□□ -0.52
LIG1-212ENST00000596549 FNDC5Q8NAU1 212 aa11.79□□□□□ -0.52
LIG1-212ENST00000596549 OR4C3Q8NH37 302 aa11.79□□□□□ -0.52
LIG1-212ENST00000596549 PSMA8Q8TAA3 256 aa11.79□□□□□ -0.52
LIG1-212ENST00000596549 FAM110BQ8TC76 370 aa11.79□□□□□ -0.52
LIG1-212ENST00000596549 DUSP19Q8WTR2 217 aa11.79□□□□□ -0.52
LIG1-212ENST00000596549 DTNBP1Q96EV8 351 aa11.79□□□□□ -0.52
LIG1-212ENST00000596549 ZFP3Q96NJ6 502 aa11.79□□□□□ -0.52
LIG1-212ENST00000596549 SORT1Q99523 831 aa11.79□□□□□ -0.52
LIG1-212ENST00000596549 GPATCH1Q9BRR8 931 aaKnown RBP11.79□□□□□ -0.52
LIG1-212ENST00000596549 YIPF4Q9BSR8 244 aa11.79□□□□□ -0.52
LIG1-212ENST00000596549 SFXN3Q9BWM7 321 aa11.79□□□□□ -0.52
LIG1-212ENST00000596549 CXorf36Q9H7Y0 433 aa11.79□□□□□ -0.52
LIG1-212ENST00000596549 C3orf14Q9HBI5 128 aa11.79□□□□□ -0.52
LIG1-212ENST00000596549 ZCCHC3Q9NUD5 404 aaKnown RBP11.79□□□□□ -0.52
LIG1-212ENST00000596549 MRTO4Q9UKD2 239 aaKnown RBP11.79□□□□□ -0.52
LIG1-212ENST00000596549 NUP214P35658 2090 aaPredicted RBP11.79□□□□□ -0.52
LIG1-212ENST00000596549 ANKHD1Q8IWZ3 2542 aaKnown RBP11.78□□□□□ -0.52
LIG1-212ENST00000596549 A0A1W2PRB8 838 aa11.78□□□□□ -0.52
LIG1-212ENST00000596549 FAM221AA4D161 298 aa11.78□□□□□ -0.52
LIG1-212ENST00000596549 WDR91A4D1P6 747 aa11.78□□□□□ -0.52
LIG1-212ENST00000596549 ALG1L2C9J202 215 aa11.78□□□□□ -0.52
LIG1-212ENST00000596549 H3BML4 177 aa11.78□□□□□ -0.52
LIG1-212ENST00000596549 RGS16O15492 202 aaPredicted RBP11.78□□□□□ -0.52
LIG1-212ENST00000596549 CTAG2O75638 210 aa11.78□□□□□ -0.52
LIG1-212ENST00000596549 ZWINTO95229 277 aa11.78□□□□□ -0.52
LIG1-212ENST00000596549 C6orf47O95873 294 aa11.78□□□□□ -0.52
LIG1-212ENST00000596549 SERPINE1P05121 402 aa11.78□□□□□ -0.52
LIG1-212ENST00000596549 HMGN2P05204 90 aaKnown RBP11.78□□□□□ -0.52
LIG1-212ENST00000596549 OPRM1P35372 400 aa11.78□□□□□ -0.52
LIG1-212ENST00000596549 KIR2DL3P43628 341 aa11.78□□□□□ -0.52
LIG1-212ENST00000596549 SUCLG1P53597 346 aaKnown RBP11.78□□□□□ -0.52
LIG1-212ENST00000596549 CLDN20P56880 219 aa11.78□□□□□ -0.52
LIG1-212ENST00000596549 MPP2Q14168 576 aa11.78□□□□□ -0.52
LIG1-212ENST00000596549 LASP1Q14847 261 aaKnown RBP11.78□□□□□ -0.52
LIG1-212ENST00000596549 CD226Q15762 336 aa11.78□□□□□ -0.52
LIG1-212ENST00000596549 CHI3L2Q15782 390 aa11.78□□□□□ -0.52
LIG1-212ENST00000596549 PDCD2Q16342 344 aaPredicted RBP11.78□□□□□ -0.52
LIG1-212ENST00000596549 BCL2A1Q16548 175 aa11.78□□□□□ -0.52
LIG1-212ENST00000596549 TMEM44Q2T9K0 475 aa11.78□□□□□ -0.52
LIG1-212ENST00000596549 VPS26BQ4G0F5 336 aa11.78□□□□□ -0.52
LIG1-212ENST00000596549 GGNQ86UU5 652 aa11.78□□□□□ -0.52
LIG1-212ENST00000596549 GRAMD2AQ8IUY3 354 aa11.78□□□□□ -0.52
LIG1-212ENST00000596549 NUDCD3Q8IVD9 361 aa11.78□□□□□ -0.52
LIG1-212ENST00000596549 HOMEZQ8IX15 550 aa11.78□□□□□ -0.52
LIG1-212ENST00000596549 GATSQ8NAP1 163 aa11.78□□□□□ -0.52
LIG1-212ENST00000596549 CEP70Q8NHQ1 597 aa11.78□□□□□ -0.52
LIG1-212ENST00000596549 JADE3Q92613 823 aa11.78□□□□□ -0.52
LIG1-212ENST00000596549 CDS1Q92903 461 aa11.78□□□□□ -0.52
LIG1-212ENST00000596549 WNT2BQ93097 391 aa11.78□□□□□ -0.52
LIG1-212ENST00000596549 INTS12Q96CB8 462 aaKnown RBP11.78□□□□□ -0.52
LIG1-212ENST00000596549 TUBGCP3Q96CW5 907 aa11.78□□□□□ -0.52
LIG1-212ENST00000596549 PPP1R36Q96LQ0 422 aa11.78□□□□□ -0.52
LIG1-212ENST00000596549 ZIM3Q96PE6 472 aa11.78□□□□□ -0.52
LIG1-212ENST00000596549 TM9SF2Q99805 663 aa11.78□□□□□ -0.52
LIG1-212ENST00000596549 TBL1XR1Q9BZK7 514 aa11.78□□□□□ -0.52
LIG1-212ENST00000596549 SLC24A3Q9HC58 644 aa11.78□□□□□ -0.52
LIG1-212ENST00000596549 SSU72Q9NP77 194 aaKnown RBP11.78□□□□□ -0.52
LIG1-212ENST00000596549 SDHAF3Q9NRP4 125 aa11.78□□□□□ -0.52
LIG1-212ENST00000596549 FOXD3Q9UJU5 478 aaPredicted RBP11.78□□□□□ -0.52
LIG1-212ENST00000596549 ZNF337Q9Y3M9 751 aa11.78□□□□□ -0.52
LIG1-212ENST00000596549 SEC14L5O43304 696 aa11.77□□□□□ -0.53
LIG1-212ENST00000596549 CTIFO43310 598 aaKnown RBP11.77□□□□□ -0.53
LIG1-212ENST00000596549 HSPA4LO95757 839 aa11.77□□□□□ -0.53
LIG1-212ENST00000596549 NGFRP08138 427 aa11.77□□□□□ -0.53
LIG1-212ENST00000596549 ALOX5P09917 674 aa11.77□□□□□ -0.53
LIG1-212ENST00000596549 G6PDP11413 515 aa11.77□□□□□ -0.53
LIG1-212ENST00000596549 PEPDP12955 493 aa11.77□□□□□ -0.53
LIG1-212ENST00000596549 RPL3P39023 403 aaKnown RBP11.77□□□□□ -0.53
LIG1-212ENST00000596549 PRIM2P49643 509 aa11.77□□□□□ -0.53
LIG1-212ENST00000596549 DIO3P55073 304 aa11.77□□□□□ -0.53
LIG1-212ENST00000596549 C21orf58P58505 322 aa11.77□□□□□ -0.53
LIG1-212ENST00000596549 SORDQ00796 357 aa11.77□□□□□ -0.53
LIG1-212ENST00000596549 C17orf67Q0P5P2 114 aa11.77□□□□□ -0.53
LIG1-212ENST00000596549 ZCCHC12Q6PEW1 402 aa11.77□□□□□ -0.53
LIG1-212ENST00000596549 CAMKMTQ7Z624 323 aa11.77□□□□□ -0.53
LIG1-212ENST00000596549 LUZP2Q86TE4 346 aa11.77□□□□□ -0.53
LIG1-212ENST00000596549 COX18Q8N8Q8 333 aa11.77□□□□□ -0.53
LIG1-212ENST00000596549 FIG4Q92562 907 aa11.77□□□□□ -0.53
LIG1-212ENST00000596549 COQ8BQ96D53 544 aa11.77□□□□□ -0.53
LIG1-212ENST00000596549 ZNF845Q96IR2 970 aaPredicted RBP11.77□□□□□ -0.53
LIG1-212ENST00000596549 PTGES2Q9H7Z7 377 aa11.77□□□□□ -0.53
LIG1-212ENST00000596549 GPATCH2Q9NW75 528 aa11.77□□□□□ -0.53
LIG1-212ENST00000596549 GALNT8Q9NY28 637 aa11.77□□□□□ -0.53
LIG1-212ENST00000596549 ASIC5Q9NY37 505 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms