RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 ANAPC2Q9UJX6 822 aa9.66□□□□□ -0.86
LIG1-210ENST00000596332 MKLN1Q9UL63 735 aa9.66□□□□□ -0.86
LIG1-210ENST00000596332 OR10H1Q9Y4A9 318 aa9.66□□□□□ -0.86
LIG1-210ENST00000596332 COL6A6A6NMZ7 2263 aa9.65□□□□□ -0.86
LIG1-210ENST00000596332 IGLV3-32A0A0A0MS00 114 aa9.65□□□□□ -0.86
LIG1-210ENST00000596332 PRAMEF25A6NGN4 478 aa9.65□□□□□ -0.86
LIG1-210ENST00000596332 B8ZZF3 427 aa9.65□□□□□ -0.86
LIG1-210ENST00000596332 ALG1L2C9J202 215 aa9.65□□□□□ -0.86
LIG1-210ENST00000596332 NDUFAB1O14561 156 aa9.65□□□□□ -0.86
LIG1-210ENST00000596332 TP53I11O14683 189 aa9.65□□□□□ -0.86
LIG1-210ENST00000596332 AIM2O14862 343 aa9.65□□□□□ -0.86
LIG1-210ENST00000596332 KIAA0513O60268 411 aa9.65□□□□□ -0.86
LIG1-210ENST00000596332 ADAM11O75078 769 aa9.65□□□□□ -0.86
LIG1-210ENST00000596332 DCTN3O75935 186 aa9.65□□□□□ -0.86
LIG1-210ENST00000596332 SOX30O94993 753 aa9.65□□□□□ -0.86
LIG1-210ENST00000596332 CBX6O95503 412 aa9.65□□□□□ -0.86
LIG1-210ENST00000596332 ANP32DO95626 131 aa9.65□□□□□ -0.86
LIG1-210ENST00000596332 KRT16P08779 473 aa9.65□□□□□ -0.86
LIG1-210ENST00000596332 CELA3AP09093 270 aa9.65□□□□□ -0.86
LIG1-210ENST00000596332 ARAFP10398 606 aa9.65□□□□□ -0.86
LIG1-210ENST00000596332 RPS4Y1P22090 263 aaKnown RBP9.65□□□□□ -0.86
LIG1-210ENST00000596332 LCN1P31025 176 aa9.65□□□□□ -0.86
LIG1-210ENST00000596332 EVI2BP34910 448 aa9.65□□□□□ -0.86
LIG1-210ENST00000596332 CRATP43155 626 aa9.65□□□□□ -0.86
LIG1-210ENST00000596332 CPA2P48052 419 aa9.65□□□□□ -0.86
LIG1-210ENST00000596332 TMED10P49755 219 aaKnown RBP9.65□□□□□ -0.86
LIG1-210ENST00000596332 KHKP50053 298 aa9.65□□□□□ -0.86
LIG1-210ENST00000596332 ATP12AP54707 1039 aa9.65□□□□□ -0.86
LIG1-210ENST00000596332 DSTNP60981 165 aa9.65□□□□□ -0.86
LIG1-210ENST00000596332 FOXK1P85037 733 aa9.65□□□□□ -0.86
LIG1-210ENST00000596332 FADDQ13158 208 aa9.65□□□□□ -0.86
LIG1-210ENST00000596332 EFR3AQ14156 821 aa9.65□□□□□ -0.86
LIG1-210ENST00000596332 MAPRE2Q15555 327 aa9.65□□□□□ -0.86
LIG1-210ENST00000596332 SLC30A6Q6NXT4 461 aa9.65□□□□□ -0.86
LIG1-210ENST00000596332 LRRC74BQ6ZQY2 392 aa9.65□□□□□ -0.86
LIG1-210ENST00000596332 FGD2Q7Z6J4 655 aa9.65□□□□□ -0.86
LIG1-210ENST00000596332 HMGN2P46Q86SG4 172 aa9.65□□□□□ -0.86
LIG1-210ENST00000596332 COMTD1Q86VU5 262 aa9.65□□□□□ -0.86
LIG1-210ENST00000596332 LSRQ86X29 649 aaPredicted RBP9.65□□□□□ -0.86
LIG1-210ENST00000596332 ZZZ3Q8IYH5 903 aa9.65□□□□□ -0.86
LIG1-210ENST00000596332 FADS6Q8N9I5 356 aa9.65□□□□□ -0.86
LIG1-210ENST00000596332 TMEM178AQ8NBL3 297 aa9.65□□□□□ -0.86
LIG1-210ENST00000596332 OR8J3Q8NGG0 315 aa9.65□□□□□ -0.86
LIG1-210ENST00000596332 TMEM41AQ96HV5 264 aa9.65□□□□□ -0.86
LIG1-210ENST00000596332 NPAS1Q99742 590 aa9.65□□□□□ -0.86
LIG1-210ENST00000596332 FAM173AQ9BQD7 235 aa9.65□□□□□ -0.86
LIG1-210ENST00000596332 QRSL1Q9H0R6 528 aaKnown RBP9.65□□□□□ -0.86
LIG1-210ENST00000596332 TMEM38AQ9H6F2 299 aa9.65□□□□□ -0.86
LIG1-210ENST00000596332 BCL2L10Q9HD36 194 aa9.65□□□□□ -0.86
LIG1-210ENST00000596332 A4GALTQ9NPC4 353 aa9.65□□□□□ -0.86
LIG1-210ENST00000596332 UBQLN4Q9NRR5 601 aa9.65□□□□□ -0.86
LIG1-210ENST00000596332 PLSCR2Q9NRY7 297 aa9.65□□□□□ -0.86
LIG1-210ENST00000596332 KLF13Q9Y2Y9 288 aaPredicted RBP9.65□□□□□ -0.86
LIG1-210ENST00000596332 SPTA1P02549 2419 aa9.65□□□□□ -0.86
LIG1-210ENST00000596332 A0A1W2PQD3 144 aa9.64□□□□□ -0.87
LIG1-210ENST00000596332 CLDN24A6NM45 220 aa9.64□□□□□ -0.87
LIG1-210ENST00000596332 NME4O00746 187 aa9.64□□□□□ -0.87
LIG1-210ENST00000596332 SNPHO15079 494 aa9.64□□□□□ -0.87
LIG1-210ENST00000596332 ZNHIT1O43257 154 aa9.64□□□□□ -0.87
LIG1-210ENST00000596332 ZIC3O60481 467 aa9.64□□□□□ -0.87
LIG1-210ENST00000596332 DNAJA2O60884 412 aa9.64□□□□□ -0.87
LIG1-210ENST00000596332 STX11O75558 287 aa9.64□□□□□ -0.87
LIG1-210ENST00000596332 RASAL1O95294 804 aa9.64□□□□□ -0.87
LIG1-210ENST00000596332 AGR2O95994 175 aa9.64□□□□□ -0.87
LIG1-210ENST00000596332 AK1P00568 194 aa9.64□□□□□ -0.87
LIG1-210ENST00000596332 P04436 131 aa9.64□□□□□ -0.87
LIG1-210ENST00000596332 IL12BP29460 328 aa9.64□□□□□ -0.87
LIG1-210ENST00000596332 DCTP40126 519 aa9.64□□□□□ -0.87
LIG1-210ENST00000596332 ADH7P40394 386 aa9.64□□□□□ -0.87
LIG1-210ENST00000596332 RNF144AP50876 292 aaPredicted RBP9.64□□□□□ -0.87
LIG1-210ENST00000596332 PCBP3P57721 371 aaKnown RBP9.64□□□□□ -0.87
LIG1-210ENST00000596332 TXNL4AP83876 142 aaKnown RBP9.64□□□□□ -0.87
LIG1-210ENST00000596332 GABPB1Q06547 395 aaPredicted RBP9.64□□□□□ -0.87
LIG1-210ENST00000596332 CMPK2Q5EBM0 449 aa9.64□□□□□ -0.87
LIG1-210ENST00000596332 RPS26P11Q5JNZ5 115 aaPredicted RBP9.64□□□□□ -0.87
LIG1-210ENST00000596332 TIGD3Q6B0B8 471 aa9.64□□□□□ -0.87
LIG1-210ENST00000596332 CBLN3Q6UW01 205 aa9.64□□□□□ -0.87
LIG1-210ENST00000596332 RINLQ6ZS11 566 aa9.64□□□□□ -0.87
LIG1-210ENST00000596332 TMEM251Q8N6I4 163 aa9.64□□□□□ -0.87
LIG1-210ENST00000596332 OR10A6Q8NH74 314 aa9.64□□□□□ -0.87
LIG1-210ENST00000596332 DUSP19Q8WTR2 217 aa9.64□□□□□ -0.87
LIG1-210ENST00000596332 FAR1Q8WVX9 515 aa9.64□□□□□ -0.87
LIG1-210ENST00000596332 TMCO6Q96DC7 493 aa9.64□□□□□ -0.87
LIG1-210ENST00000596332 CMTM5Q96DZ9 223 aa9.64□□□□□ -0.87
LIG1-210ENST00000596332 TMEM19Q96HH6 336 aa9.64□□□□□ -0.87
LIG1-210ENST00000596332 C5orf34Q96MH7 638 aa9.64□□□□□ -0.87
LIG1-210ENST00000596332 GNRHR2Q96P88 292 aa9.64□□□□□ -0.87
LIG1-210ENST00000596332 SLX1AQ9BQ83 275 aa9.64□□□□□ -0.87
LIG1-210ENST00000596332 WFDC6Q9BQY6 131 aa9.64□□□□□ -0.87
LIG1-210ENST00000596332 G6PC3Q9BUM1 346 aa9.64□□□□□ -0.87
LIG1-210ENST00000596332 TTTY12Q9BZ98 90 aa9.64□□□□□ -0.87
LIG1-210ENST00000596332 ZDHHC11Q9H8X9 412 aa9.64□□□□□ -0.87
LIG1-210ENST00000596332 EFCAB1Q9HAE3 211 aa9.64□□□□□ -0.87
LIG1-210ENST00000596332 POLE3Q9NRF9 147 aa9.64□□□□□ -0.87
LIG1-210ENST00000596332 TMEM181Q9P2C4 612 aa9.64□□□□□ -0.87
LIG1-210ENST00000596332 ABCD2Q9UBJ2 740 aa9.64□□□□□ -0.87
LIG1-210ENST00000596332 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.64□□□□□ -0.87
LIG1-210ENST00000596332 TAGLN3Q9UI15 199 aa9.64□□□□□ -0.87
LIG1-210ENST00000596332 FBXL2Q9UKC9 423 aa9.64□□□□□ -0.87
LIG1-210ENST00000596332 ABCG2Q9UNQ0 655 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms