RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 ATP6V1C1P21283 382 aa17.67■□□□□ 0.42
PNKP-207ENST00000596014 PRDX6P30041 224 aa17.67■□□□□ 0.42
PNKP-207ENST00000596014 LCN1P31025 176 aa17.67■□□□□ 0.42
PNKP-207ENST00000596014 CRATP43155 626 aa17.67■□□□□ 0.42
PNKP-207ENST00000596014 ALDH6A1Q02252 535 aaKnown RBP17.67■□□□□ 0.42
PNKP-207ENST00000596014 STX5Q13190 355 aa17.67■□□□□ 0.42
PNKP-207ENST00000596014 NFYCQ13952 458 aa17.67■□□□□ 0.42
PNKP-207ENST00000596014 GRAMD1BQ3KR37 738 aa17.67■□□□□ 0.42
PNKP-207ENST00000596014 MMEL1Q495T6 779 aa17.67■□□□□ 0.42
PNKP-207ENST00000596014 DNAL1Q4LDG9 190 aa17.67■□□□□ 0.42
PNKP-207ENST00000596014 RBM15BQ8NDT2 890 aaKnown RBP17.67■□□□□ 0.42
PNKP-207ENST00000596014 NR4A3Q92570 626 aa17.67■□□□□ 0.42
PNKP-207ENST00000596014 ROPN1LQ96C74 230 aa17.67■□□□□ 0.42
PNKP-207ENST00000596014 JSRP1Q96MG2 331 aaPredicted RBP17.67■□□□□ 0.42
PNKP-207ENST00000596014 TTTY12Q9BZ98 90 aa17.67■□□□□ 0.42
PNKP-207ENST00000596014 MMADHCQ9H3L0 296 aaPredicted RBP17.67■□□□□ 0.42
PNKP-207ENST00000596014 IL1RL2Q9HB29 575 aa17.67■□□□□ 0.42
PNKP-207ENST00000596014 ZFP64Q9NPA5 681 aa17.67■□□□□ 0.42
PNKP-207ENST00000596014 OLAHQ9NV23 265 aa17.67■□□□□ 0.42
PNKP-207ENST00000596014 BOKQ9UMX3 212 aaPredicted RBP17.67■□□□□ 0.42
PNKP-207ENST00000596014 ABCG2Q9UNQ0 655 aa17.67■□□□□ 0.42
PNKP-207ENST00000596014 GMEB1Q9Y692 573 aa17.67■□□□□ 0.42
PNKP-207ENST00000596014 ZGRF1Q86YA3 2104 aa17.66■□□□□ 0.42
PNKP-207ENST00000596014 NCKAP5O14513 1909 aa17.66■□□□□ 0.42
PNKP-207ENST00000596014 ETFAP13804 333 aa17.66■□□□□ 0.42
PNKP-207ENST00000596014 PPIBP23284 216 aaKnown RBP17.66■□□□□ 0.42
PNKP-207ENST00000596014 MST1P26927 711 aa17.66■□□□□ 0.42
PNKP-207ENST00000596014 PLGLB1Q02325 96 aa17.66■□□□□ 0.42
PNKP-207ENST00000596014 RGNQ15493 299 aa17.66■□□□□ 0.42
PNKP-207ENST00000596014 HYAL4Q2M3T9 481 aa17.66■□□□□ 0.42
PNKP-207ENST00000596014 RUNDC3AQ59EK9 446 aa17.66■□□□□ 0.42
PNKP-207ENST00000596014 FNDC7Q5VTL7 733 aa17.66■□□□□ 0.42
PNKP-207ENST00000596014 ZNF605Q86T29 641 aa17.66■□□□□ 0.42
PNKP-207ENST00000596014 ARHGAP24Q8N264 748 aa17.66■□□□□ 0.42
PNKP-207ENST00000596014 POU5F2Q8N7G0 328 aa17.66■□□□□ 0.42
PNKP-207ENST00000596014 FBXO27Q8NI29 283 aa17.66■□□□□ 0.42
PNKP-207ENST00000596014 TMEM41AQ96HV5 264 aa17.66■□□□□ 0.42
PNKP-207ENST00000596014 RAD21L1Q9H4I0 556 aa17.66■□□□□ 0.42
PNKP-207ENST00000596014 UBQLN4Q9NRR5 601 aa17.66■□□□□ 0.42
PNKP-207ENST00000596014 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.66■□□□□ 0.42
PNKP-207ENST00000596014 ZNF407Q9C0G0 2248 aa17.66■□□□□ 0.42
PNKP-207ENST00000596014 LRRC3CA6NJW4 275 aa17.65■□□□□ 0.42
PNKP-207ENST00000596014 ADAM10O14672 748 aa17.65■□□□□ 0.42
PNKP-207ENST00000596014 FCMRO60667 390 aa17.65■□□□□ 0.42
PNKP-207ENST00000596014 STX11O75558 287 aa17.65■□□□□ 0.42
PNKP-207ENST00000596014 NGFRP08138 427 aa17.65■□□□□ 0.42
PNKP-207ENST00000596014 COX4I1P13073 169 aa17.65■□□□□ 0.42
PNKP-207ENST00000596014 TBXA2RP21731 343 aa17.65■□□□□ 0.42
PNKP-207ENST00000596014 MASP1P48740 699 aa17.65■□□□□ 0.42
PNKP-207ENST00000596014 GAS1P54826 345 aa17.65■□□□□ 0.42
PNKP-207ENST00000596014 PPIAP62937 165 aaKnown RBP17.65■□□□□ 0.42
PNKP-207ENST00000596014 MXRA7P84157 204 aa17.65■□□□□ 0.42
PNKP-207ENST00000596014 FUT5Q11128 374 aa17.65■□□□□ 0.42
PNKP-207ENST00000596014 REP15Q6BDI9 236 aa17.65■□□□□ 0.42
PNKP-207ENST00000596014 APOOLQ6UXV4 268 aa17.65■□□□□ 0.42
PNKP-207ENST00000596014 ZNF597Q96LX8 424 aa17.65■□□□□ 0.42
PNKP-207ENST00000596014 ANKRD27Q96NW4 1050 aa17.65■□□□□ 0.42
PNKP-207ENST00000596014 CGREF1Q99674 301 aa17.65■□□□□ 0.42
PNKP-207ENST00000596014 SLX1AQ9BQ83 275 aa17.65■□□□□ 0.42
PNKP-207ENST00000596014 RTN4RQ9BZR6 473 aa17.65■□□□□ 0.42
PNKP-207ENST00000596014 TSPAN10Q9H1Z9 355 aaPredicted RBP17.65■□□□□ 0.42
PNKP-207ENST00000596014 IKZF5Q9H5V7 419 aa17.65■□□□□ 0.42
PNKP-207ENST00000596014 LIPT1Q9Y234 373 aa17.65■□□□□ 0.42
PNKP-207ENST00000596014 PCNX3Q9H6A9 2034 aa17.65■□□□□ 0.42
PNKP-207ENST00000596014 DNAJC13O75165 2243 aa17.65■□□□□ 0.42
PNKP-207ENST00000596014 FAM166BA8MTA8 275 aa17.64■□□□□ 0.42
PNKP-207ENST00000596014 MRASO14807 208 aa17.64■□□□□ 0.42
PNKP-207ENST00000596014 SCO2O43819 266 aa17.64■□□□□ 0.42
PNKP-207ENST00000596014 WISP2O76076 250 aa17.64■□□□□ 0.42
PNKP-207ENST00000596014 OXSR1O95747 527 aaPredicted RBP17.64■□□□□ 0.42
PNKP-207ENST00000596014 CLK3P49761 638 aaKnown RBP17.64■□□□□ 0.42
PNKP-207ENST00000596014 DSTNP60981 165 aa17.64■□□□□ 0.42
PNKP-207ENST00000596014 FADDQ13158 208 aa17.64■□□□□ 0.42
PNKP-207ENST00000596014 FLYWCH1Q4VC44 716 aa17.64■□□□□ 0.42
PNKP-207ENST00000596014 TIGD3Q6B0B8 471 aa17.64■□□□□ 0.42
PNKP-207ENST00000596014 OLIG3Q7RTU3 272 aa17.64■□□□□ 0.42
PNKP-207ENST00000596014 SLC22A16Q86VW1 577 aa17.64■□□□□ 0.42
PNKP-207ENST00000596014 SIAH3Q8IW03 269 aa17.64■□□□□ 0.42
PNKP-207ENST00000596014 MIB2Q96AX9 1013 aa17.64■□□□□ 0.42
PNKP-207ENST00000596014 GNRHR2Q96P88 292 aa17.64■□□□□ 0.42
PNKP-207ENST00000596014 TBL1XR1Q9BZK7 514 aa17.64■□□□□ 0.42
PNKP-207ENST00000596014 ZNF350Q9GZX5 532 aa17.64■□□□□ 0.42
PNKP-207ENST00000596014 HOXD1Q9GZZ0 328 aa17.64■□□□□ 0.42
PNKP-207ENST00000596014 C1orf21Q9H246 121 aa17.64■□□□□ 0.42
PNKP-207ENST00000596014 WIF1Q9Y5W5 379 aa17.64■□□□□ 0.42
PNKP-207ENST00000596014 NPIPA5A0A0B4J1W7 369 aa17.64■□□□□ 0.41
PNKP-207ENST00000596014 EVPLLA8MZ36 301 aa17.64■□□□□ 0.41
PNKP-207ENST00000596014 ALG1L2C9J202 215 aa17.64■□□□□ 0.41
PNKP-207ENST00000596014 NPIPA7E9PJI5 369 aa17.64■□□□□ 0.41
PNKP-207ENST00000596014 NPIPA5E9PKD4 350 aa17.64■□□□□ 0.41
PNKP-207ENST00000596014 ACOT7O00154 380 aa17.64■□□□□ 0.41
PNKP-207ENST00000596014 TFECO14948 347 aaPredicted RBP17.64■□□□□ 0.41
PNKP-207ENST00000596014 ZIC2O95409 532 aaPredicted RBP17.64■□□□□ 0.41
PNKP-207ENST00000596014 GUSBP08236 651 aa17.64■□□□□ 0.41
PNKP-207ENST00000596014 RFPL3SP0C7P2 107 aa17.64■□□□□ 0.41
PNKP-207ENST00000596014 NPIPA8P0DM63 369 aa17.64■□□□□ 0.41
PNKP-207ENST00000596014 TDGF1P3P51864 188 aa17.64■□□□□ 0.41
PNKP-207ENST00000596014 ATP12AP54707 1039 aa17.64■□□□□ 0.41
PNKP-207ENST00000596014 SYPL1Q16563 259 aa17.64■□□□□ 0.41
PNKP-207ENST00000596014 TRMT5Q32P41 509 aaKnown RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms