RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 TAS2R50P59544 299 aa11.81□□□□□ -0.52
SCAF1-202ENST00000595242 C2orf80Q0P641 193 aa11.81□□□□□ -0.52
SCAF1-202ENST00000595242 GAB1Q13480 694 aa11.81□□□□□ -0.52
SCAF1-202ENST00000595242 PDK3Q15120 406 aa11.81□□□□□ -0.52
SCAF1-202ENST00000595242 GXYLT1Q4G148 440 aa11.81□□□□□ -0.52
SCAF1-202ENST00000595242 GARNL3Q5VVW2 1013 aa11.81□□□□□ -0.52
SCAF1-202ENST00000595242 ANKRD26P1Q6NSI1 321 aa11.81□□□□□ -0.52
SCAF1-202ENST00000595242 ZBTB49Q6ZSB9 765 aa11.81□□□□□ -0.52
SCAF1-202ENST00000595242 ANKRD37Q7Z713 158 aa11.81□□□□□ -0.52
SCAF1-202ENST00000595242 PAQR7Q86WK9 346 aa11.81□□□□□ -0.52
SCAF1-202ENST00000595242 SULF2Q8IWU5 870 aa11.81□□□□□ -0.52
SCAF1-202ENST00000595242 LGI4Q8N135 537 aa11.81□□□□□ -0.52
SCAF1-202ENST00000595242 CSNK1A1LQ8N752 337 aa11.81□□□□□ -0.52
SCAF1-202ENST00000595242 FAM47BQ8NA70 645 aa11.81□□□□□ -0.52
SCAF1-202ENST00000595242 OR52N2Q8NGI0 321 aa11.81□□□□□ -0.52
SCAF1-202ENST00000595242 C16orf52Q8NHV5 167 aa11.81□□□□□ -0.52
SCAF1-202ENST00000595242 CDC26Q8NHZ8 85 aa11.81□□□□□ -0.52
SCAF1-202ENST00000595242 FAM162AQ96A26 154 aa11.81□□□□□ -0.52
SCAF1-202ENST00000595242 RGMAQ96B86 450 aa11.81□□□□□ -0.52
SCAF1-202ENST00000595242 TBC1D20Q96BZ9 403 aa11.81□□□□□ -0.52
SCAF1-202ENST00000595242 PRAP1Q96NZ9 151 aa11.81□□□□□ -0.52
SCAF1-202ENST00000595242 CENPKQ9BS16 269 aa11.81□□□□□ -0.52
SCAF1-202ENST00000595242 TTYH2Q9BSA4 534 aa11.81□□□□□ -0.52
SCAF1-202ENST00000595242 BDH2Q9BUT1 245 aa11.81□□□□□ -0.52
SCAF1-202ENST00000595242 DDX31Q9H8H2 851 aaKnown RBP11.81□□□□□ -0.52
SCAF1-202ENST00000595242 TPT1P8Q9HAU6 139 aa11.81□□□□□ -0.52
SCAF1-202ENST00000595242 MRPS30Q9NP92 439 aaKnown RBP11.81□□□□□ -0.52
SCAF1-202ENST00000595242 PLSCR2Q9NRY7 297 aa11.81□□□□□ -0.52
SCAF1-202ENST00000595242 Q9UFV3 132 aa11.81□□□□□ -0.52
SCAF1-202ENST00000595242 CBLCQ9ULV8 474 aa11.81□□□□□ -0.52
SCAF1-202ENST00000595242 FREM3P0C091 2139 aa11.8□□□□□ -0.52
SCAF1-202ENST00000595242 A0A0A6YYD5 115 aa11.8□□□□□ -0.52
SCAF1-202ENST00000595242 OR2A25A4D2G3 310 aa11.8□□□□□ -0.52
SCAF1-202ENST00000595242 KLRC4-KLRK1H3BQV0 150 aa11.8□□□□□ -0.52
SCAF1-202ENST00000595242 H7C1Q1 480 aa11.8□□□□□ -0.52
SCAF1-202ENST00000595242 SAP18O00422 153 aaKnown RBP11.8□□□□□ -0.52
SCAF1-202ENST00000595242 DLGAP1O14490 977 aa11.8□□□□□ -0.52
SCAF1-202ENST00000595242 SOCS2O14508 198 aa11.8□□□□□ -0.52
SCAF1-202ENST00000595242 CDK2AP1O14519 115 aa11.8□□□□□ -0.52
SCAF1-202ENST00000595242 CLOCKO15516 846 aa11.8□□□□□ -0.52
SCAF1-202ENST00000595242 LCMT2O60294 686 aaKnown RBP11.8□□□□□ -0.52
SCAF1-202ENST00000595242 SMNDC1O75940 238 aaKnown RBP eCLIP11.8□□□□□ -0.52
SCAF1-202ENST00000595242 CPSF4O95639 269 aaKnown RBP11.8□□□□□ -0.52
SCAF1-202ENST00000595242 SEMG1P04279 462 aa11.8□□□□□ -0.52
SCAF1-202ENST00000595242 KLK1P06870 262 aa11.8□□□□□ -0.52
SCAF1-202ENST00000595242 CYC1P08574 325 aa11.8□□□□□ -0.52
SCAF1-202ENST00000595242 DDCP20711 480 aa11.8□□□□□ -0.52
SCAF1-202ENST00000595242 ACVR2AP27037 513 aa11.8□□□□□ -0.52
SCAF1-202ENST00000595242 UQCRC1P31930 480 aa11.8□□□□□ -0.52
SCAF1-202ENST00000595242 PEX19P40855 299 aa11.8□□□□□ -0.52
SCAF1-202ENST00000595242 NR0B1P51843 470 aaKnown RBP11.8□□□□□ -0.52
SCAF1-202ENST00000595242 DCAF7P61962 342 aa11.8□□□□□ -0.52
SCAF1-202ENST00000595242 RGNQ15493 299 aa11.8□□□□□ -0.52
SCAF1-202ENST00000595242 FLYWCH1Q4VC44 716 aa11.8□□□□□ -0.52
SCAF1-202ENST00000595242 NHSL2Q5HYW2 709 aa11.8□□□□□ -0.52
SCAF1-202ENST00000595242 CCNYL2Q5T2Q4 361 aa11.8□□□□□ -0.52
SCAF1-202ENST00000595242 ZNF621Q6ZSS3 439 aa11.8□□□□□ -0.52
SCAF1-202ENST00000595242 UBE3DQ7Z6J8 389 aa11.8□□□□□ -0.52
SCAF1-202ENST00000595242 RPS19BP1Q86WX3 136 aaKnown RBP11.8□□□□□ -0.52
SCAF1-202ENST00000595242 GALNT4Q8N4A0 578 aa11.8□□□□□ -0.52
SCAF1-202ENST00000595242 TBC1D19Q8N5T2 526 aa11.8□□□□□ -0.52
SCAF1-202ENST00000595242 SIMC1Q8NDZ2 872 aa11.8□□□□□ -0.52
SCAF1-202ENST00000595242 TM4SF18Q96CE8 201 aa11.8□□□□□ -0.52
SCAF1-202ENST00000595242 SLC47A1Q96FL8 570 aa11.8□□□□□ -0.52
SCAF1-202ENST00000595242 RNF145Q96MT1 663 aa11.8□□□□□ -0.52
SCAF1-202ENST00000595242 F2RL3Q96RI0 385 aa11.8□□□□□ -0.52
SCAF1-202ENST00000595242 SEPHS2Q99611 448 aa11.8□□□□□ -0.52
SCAF1-202ENST00000595242 DPH7Q9BTV6 452 aa11.8□□□□□ -0.52
SCAF1-202ENST00000595242 TBCDQ9BTW9 1192 aa11.8□□□□□ -0.52
SCAF1-202ENST00000595242 ANKRD60Q9BZ19 345 aa11.8□□□□□ -0.52
SCAF1-202ENST00000595242 RAD21L1Q9H4I0 556 aa11.8□□□□□ -0.52
SCAF1-202ENST00000595242 SYNPO2LQ9H987 977 aa11.8□□□□□ -0.52
SCAF1-202ENST00000595242 NTN4Q9HB63 628 aa11.8□□□□□ -0.52
SCAF1-202ENST00000595242 PNPLA3Q9NST1 481 aa11.8□□□□□ -0.52
SCAF1-202ENST00000595242 BEX4Q9NWD9 120 aaPredicted RBP11.8□□□□□ -0.52
SCAF1-202ENST00000595242 TAS2R7Q9NYW3 318 aa11.8□□□□□ -0.52
SCAF1-202ENST00000595242 SH3BP4Q9P0V3 963 aa11.8□□□□□ -0.52
SCAF1-202ENST00000595242 DNAJB9Q9UBS3 223 aa11.8□□□□□ -0.52
SCAF1-202ENST00000595242 SCOCQ9UIL1 159 aa11.8□□□□□ -0.52
SCAF1-202ENST00000595242 SAMD4AQ9UPU9 718 aaKnown RBP11.8□□□□□ -0.52
SCAF1-202ENST00000595242 KLF13Q9Y2Y9 288 aaPredicted RBP11.8□□□□□ -0.52
SCAF1-202ENST00000595242 FEZF1A0PJY2 475 aa11.79□□□□□ -0.52
SCAF1-202ENST00000595242 SAC3D1A6NKF1 404 aa11.79□□□□□ -0.52
SCAF1-202ENST00000595242 RNF212BA8MTL3 300 aa11.79□□□□□ -0.52
SCAF1-202ENST00000595242 NPIPA2E9PIF3 369 aa11.79□□□□□ -0.52
SCAF1-202ENST00000595242 NPIPA3F8WFD2 350 aa11.79□□□□□ -0.52
SCAF1-202ENST00000595242 SMAD7O15105 426 aaKnown RBP11.79□□□□□ -0.52
SCAF1-202ENST00000595242 OR1F1O43749 312 aa11.79□□□□□ -0.52
SCAF1-202ENST00000595242 TPST1O60507 370 aa11.79□□□□□ -0.52
SCAF1-202ENST00000595242 HPRP00739 348 aa11.79□□□□□ -0.52
SCAF1-202ENST00000595242 GLI4P10075 376 aa11.79□□□□□ -0.52
SCAF1-202ENST00000595242 PCGF2P35227 344 aa11.79□□□□□ -0.52
SCAF1-202ENST00000595242 GRK3P35626 688 aa11.79□□□□□ -0.52
SCAF1-202ENST00000595242 BCL6P41182 706 aa11.79□□□□□ -0.52
SCAF1-202ENST00000595242 CHN2P52757 468 aa11.79□□□□□ -0.52
SCAF1-202ENST00000595242 MAPK12P53778 367 aa11.79□□□□□ -0.52
SCAF1-202ENST00000595242 HBA1P69905 142 aa11.79□□□□□ -0.52
SCAF1-202ENST00000595242 RBBP4Q09028 425 aa11.79□□□□□ -0.52
SCAF1-202ENST00000595242 HYAL2Q12891 473 aa11.79□□□□□ -0.52
SCAF1-202ENST00000595242 FADDQ13158 208 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 155.4 ms