RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 THY1P04216 161 aa15.41■□□□□ 0.06
LIG1-206ENST00000594067 PTBP1P26599 531 aaKnown RBP eCLIP15.41■□□□□ 0.067e-7■■■■□ 23
LIG1-206ENST00000594067 ATP6V1E1P36543 226 aa15.41■□□□□ 0.06
LIG1-206ENST00000594067 PDX1P52945 283 aa15.41■□□□□ 0.06
LIG1-206ENST00000594067 RGS8P57771 180 aaPredicted RBP15.41■□□□□ 0.06
LIG1-206ENST00000594067 MAB21L1Q13394 359 aa15.41■□□□□ 0.06
LIG1-206ENST00000594067 IRF4Q15306 451 aa15.41■□□□□ 0.06
LIG1-206ENST00000594067 SF3A2Q15428 464 aaKnown RBP15.41■□□□□ 0.06
LIG1-206ENST00000594067 ARIH2OSQ8N7S6 290 aa15.41■□□□□ 0.06
LIG1-206ENST00000594067 OR2L5Q8NG80 312 aa15.41■□□□□ 0.06
LIG1-206ENST00000594067 OR2L8Q8NGY9 312 aa15.41■□□□□ 0.06
LIG1-206ENST00000594067 NEIL3Q8TAT5 605 aa15.41■□□□□ 0.06
LIG1-206ENST00000594067 TMEM255BQ8WV15 326 aa15.41■□□□□ 0.06
LIG1-206ENST00000594067 SPHK1Q9NYA1 384 aa15.41■□□□□ 0.06
LIG1-206ENST00000594067 SERGEFQ9UGK8 458 aa15.41■□□□□ 0.06
LIG1-206ENST00000594067 APOBEC3BQ9UH17 382 aaKnown RBP15.41■□□□□ 0.06
LIG1-206ENST00000594067 TRPM6Q9BX84 2022 aa15.41■□□□□ 0.06
LIG1-206ENST00000594067 SOCS6O14544 535 aa15.41■□□□□ 0.06
LIG1-206ENST00000594067 DVL2O14641 736 aa15.41■□□□□ 0.06
LIG1-206ENST00000594067 ORC5O43913 435 aa15.41■□□□□ 0.06
LIG1-206ENST00000594067 MPIP34949 423 aa15.41■□□□□ 0.06
LIG1-206ENST00000594067 VEGFBP49765 207 aa15.41■□□□□ 0.06
LIG1-206ENST00000594067 CTBP2P56545 445 aa15.41■□□□□ 0.06
LIG1-206ENST00000594067 DBPQ10586 325 aaPredicted RBP15.41■□□□□ 0.06
LIG1-206ENST00000594067 CAMK1Q14012 370 aa15.41■□□□□ 0.06
LIG1-206ENST00000594067 C6orf132Q5T0Z8 1188 aa15.41■□□□□ 0.06
LIG1-206ENST00000594067 RTL10Q7L3V2 364 aa15.41■□□□□ 0.06
LIG1-206ENST00000594067 DGLUCYQ7Z3D6 616 aa15.41■□□□□ 0.06
LIG1-206ENST00000594067 CCDC28AQ8IWP9 274 aa15.41■□□□□ 0.06
LIG1-206ENST00000594067 RFKQ969G6 155 aa15.41■□□□□ 0.06
LIG1-206ENST00000594067 MOAP1Q96BY2 351 aa15.41■□□□□ 0.06
LIG1-206ENST00000594067 CLIP3Q96DZ5 547 aa15.41■□□□□ 0.06
LIG1-206ENST00000594067 PAWRQ96IZ0 340 aaKnown RBP15.41■□□□□ 0.06
LIG1-206ENST00000594067 SECISBP2Q96T21 854 aaKnown RBP15.41■□□□□ 0.06
LIG1-206ENST00000594067 MCHR1Q99705 422 aa15.41■□□□□ 0.06
LIG1-206ENST00000594067 SLC23A1Q9UHI7 598 aa15.41■□□□□ 0.06
LIG1-206ENST00000594067 A0A1W2PQ72 361 aa15.4■□□□□ 0.06
LIG1-206ENST00000594067 FAM183AA6NL82 134 aa15.4■□□□□ 0.06
LIG1-206ENST00000594067 ISM1B1AKI9 464 aa15.4■□□□□ 0.06
LIG1-206ENST00000594067 SGK494L7N484 410 aa15.4■□□□□ 0.06
LIG1-206ENST00000594067 AGFG1P52594 562 aaKnown RBP15.4■□□□□ 0.06
LIG1-206ENST00000594067 CLDN2P57739 230 aa15.4■□□□□ 0.06
LIG1-206ENST00000594067 DSG2Q14126 1118 aa15.4■□□□□ 0.06
LIG1-206ENST00000594067 AGBL4Q5VU57 503 aa15.4■□□□□ 0.06
LIG1-206ENST00000594067 KLBQ86Z14 1044 aa15.4■□□□□ 0.06
LIG1-206ENST00000594067 KLHL36Q8N4N3 616 aa15.4■□□□□ 0.06
LIG1-206ENST00000594067 ACOT11Q8WXI4 607 aaPredicted RBP15.4■□□□□ 0.06
LIG1-206ENST00000594067 SMG7Q92540 1137 aaKnown RBP15.4■□□□□ 0.06
LIG1-206ENST00000594067 OSTF1Q92882 214 aa15.4■□□□□ 0.06
LIG1-206ENST00000594067 SLC35A4Q96G79 324 aa15.4■□□□□ 0.06
LIG1-206ENST00000594067 ZNF649Q9BS31 505 aa15.4■□□□□ 0.06
LIG1-206ENST00000594067 CRISPLD2Q9H0B8 497 aa15.4■□□□□ 0.06
LIG1-206ENST00000594067 INMT-MINDY4F8WBC2 141 aa15.4■□□□□ 0.06
LIG1-206ENST00000594067 HLA-DPB1P04440 258 aa15.4■□□□□ 0.06
LIG1-206ENST00000594067 IFNA8P32881 189 aa15.4■□□□□ 0.06
LIG1-206ENST00000594067 STAT5AP42229 794 aa15.4■□□□□ 0.06
LIG1-206ENST00000594067 FGL2Q14314 439 aa15.4■□□□□ 0.06
LIG1-206ENST00000594067 PGGHGQ32M88 737 aa15.4■□□□□ 0.06
LIG1-206ENST00000594067 PRAMEF8Q5VWM4 474 aa15.4■□□□□ 0.06
LIG1-206ENST00000594067 PRAMEF7Q5VXH5 474 aa15.4■□□□□ 0.06
LIG1-206ENST00000594067 GDF7Q7Z4P5 450 aa15.4■□□□□ 0.06
LIG1-206ENST00000594067 AMIGO1Q86WK6 493 aa15.4■□□□□ 0.06
LIG1-206ENST00000594067 OR2L3Q8NG85 312 aa15.4■□□□□ 0.06
LIG1-206ENST00000594067 ZFPM2Q8WW38 1151 aa15.4■□□□□ 0.06
LIG1-206ENST00000594067 ARMC5Q96C12 935 aa15.4■□□□□ 0.06
LIG1-206ENST00000594067 SLC41A3Q96GZ6 507 aa15.4■□□□□ 0.06
LIG1-206ENST00000594067 ART5Q96L15 291 aa15.4■□□□□ 0.06
LIG1-206ENST00000594067 KLHL28Q9NXS3 571 aa15.4■□□□□ 0.06
LIG1-206ENST00000594067 MUC22E2RYF6 1773 aaPredicted RBP15.4■□□□□ 0.06
LIG1-206ENST00000594067 DOCK9Q9BZ29 2069 aa15.4■□□□□ 0.06
LIG1-206ENST00000594067 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.4■□□□□ 0.06
LIG1-206ENST00000594067 LOC105371267A0A1B0GV96 52 aa15.4■□□□□ 0.06
LIG1-206ENST00000594067 AKAP8O43823 692 aaKnown RBP15.4■□□□□ 0.06
LIG1-206ENST00000594067 NOS1APO75052 506 aaPredicted RBP15.4■□□□□ 0.06
LIG1-206ENST00000594067 FPR3P25089 353 aa15.4■□□□□ 0.06
LIG1-206ENST00000594067 PEBP1P30086 187 aaKnown RBP15.4■□□□□ 0.06
LIG1-206ENST00000594067 RAB25P57735 213 aa15.4■□□□□ 0.06
LIG1-206ENST00000594067 LRRC32Q14392 662 aa15.4■□□□□ 0.06
LIG1-206ENST00000594067 ESCO2Q56NI9 601 aa15.4■□□□□ 0.06
LIG1-206ENST00000594067 COL26A1Q96A83 441 aa15.4■□□□□ 0.06
LIG1-206ENST00000594067 GIMAP5Q96F15 307 aa15.4■□□□□ 0.06
LIG1-206ENST00000594067 SAMD8Q96LT4 415 aa15.4■□□□□ 0.06
LIG1-206ENST00000594067 BTBD1Q9H0C5 482 aa15.4■□□□□ 0.06
LIG1-206ENST00000594067 IL23AQ9NPF7 189 aa15.4■□□□□ 0.06
LIG1-206ENST00000594067 ATP13A2Q9NQ11 1180 aa15.4■□□□□ 0.06
LIG1-206ENST00000594067 IL20Q9NYY1 176 aa15.4■□□□□ 0.06
LIG1-206ENST00000594067 TEKT2Q9UIF3 430 aa15.4■□□□□ 0.06
LIG1-206ENST00000594067 CBLCQ9ULV8 474 aa15.4■□□□□ 0.06
LIG1-206ENST00000594067 LEUTXA8MZ59 168 aa15.39■□□□□ 0.05
LIG1-206ENST00000594067 NUDT1P36639 197 aa15.39■□□□□ 0.05
LIG1-206ENST00000594067 BTN3A2P78410 334 aa15.39■□□□□ 0.05
LIG1-206ENST00000594067 TCEA2Q15560 299 aa15.39■□□□□ 0.05
LIG1-206ENST00000594067 DECR1Q16698 335 aa15.39■□□□□ 0.05
LIG1-206ENST00000594067 WDR45BQ5MNZ6 344 aa15.39■□□□□ 0.05
LIG1-206ENST00000594067 VASNQ6EMK4 673 aa15.39■□□□□ 0.05
LIG1-206ENST00000594067 FAM111BQ6SJ93 734 aa15.39■□□□□ 0.05
LIG1-206ENST00000594067 ZNF620Q6ZNG0 422 aa15.39■□□□□ 0.05
LIG1-206ENST00000594067 CPOQ8IVL8 374 aa15.39■□□□□ 0.05
LIG1-206ENST00000594067 GJD3Q8N144 294 aa15.39■□□□□ 0.05
LIG1-206ENST00000594067 SLC37A3Q8NCC5 494 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms