RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 CRCPO75575 148 aa21.5■■□□□ 1.03
LSM4-202ENST00000593564 KCNH1O95259 989 aa21.5■■□□□ 1.03
LSM4-202ENST00000593564 ANGPTL1O95841 491 aa21.5■■□□□ 1.03
LSM4-202ENST00000593564 GABRA3P34903 492 aa21.5■■□□□ 1.03
LSM4-202ENST00000593564 FAM214BQ7L5A3 538 aa21.5■■□□□ 1.03
LSM4-202ENST00000593564 ZNF550Q7Z398 422 aa21.5■■□□□ 1.03
LSM4-202ENST00000593564 ZNF610Q8N9Z0 462 aa21.5■■□□□ 1.03
LSM4-202ENST00000593564 HOXB13Q92826 284 aaPredicted RBP21.5■■□□□ 1.03
LSM4-202ENST00000593564 CAVIN3Q969G5 261 aa21.5■■□□□ 1.03
LSM4-202ENST00000593564 UBTD1Q9HAC8 227 aa21.5■■□□□ 1.03
LSM4-202ENST00000593564 GXYLT2A0PJZ3 443 aa21.49■■□□□ 1.03
LSM4-202ENST00000593564 GLRA3O75311 464 aa21.49■■□□□ 1.03
LSM4-202ENST00000593564 HEXAP06865 529 aa21.49■■□□□ 1.03
LSM4-202ENST00000593564 KIAA0040Q15053 153 aa21.49■■□□□ 1.03
LSM4-202ENST00000593564 GRAMD1BQ3KR37 738 aa21.49■■□□□ 1.03
LSM4-202ENST00000593564 PRSS57Q6UWY2 283 aa21.49■■□□□ 1.03
LSM4-202ENST00000593564 APOOLQ6UXV4 268 aa21.49■■□□□ 1.03
LSM4-202ENST00000593564 C20orf204Q6ZNR8 217 aa21.49■■□□□ 1.03
LSM4-202ENST00000593564 ZNF551Q7Z340 670 aaPredicted RBP21.49■■□□□ 1.03
LSM4-202ENST00000593564 GGNQ86UU5 652 aa21.49■■□□□ 1.03
LSM4-202ENST00000593564 IFT20Q8IY31 132 aa21.49■■□□□ 1.03
LSM4-202ENST00000593564 ZNF764Q96H86 408 aaPredicted RBP21.49■■□□□ 1.03
LSM4-202ENST00000593564 COX4I2Q96KJ9 171 aa21.49■■□□□ 1.03
LSM4-202ENST00000593564 EGLN2Q96KS0 407 aa21.49■■□□□ 1.03
LSM4-202ENST00000593564 CCL19Q99731 98 aa21.49■■□□□ 1.03
LSM4-202ENST00000593564 TXLNGYQ9BZA5 131 aa21.49■■□□□ 1.03
LSM4-202ENST00000593564 STOML1Q9UBI4 398 aa21.49■■□□□ 1.03
LSM4-202ENST00000593564 TBK1Q9UHD2 729 aa21.49■■□□□ 1.03
LSM4-202ENST00000593564 CCL27Q9Y4X3 112 aa21.49■■□□□ 1.03
LSM4-202ENST00000593564 FN1P02751 2386 aaKnown RBP21.49■■□□□ 1.03
LSM4-202ENST00000593564 PCNX3Q9H6A9 2034 aa21.48■■□□□ 1.03
LSM4-202ENST00000593564 AQP8O94778 261 aa21.48■■□□□ 1.03
LSM4-202ENST00000593564 IGKV1D-16P01601 117 aa21.48■■□□□ 1.03
LSM4-202ENST00000593564 PROCP04070 461 aa21.48■■□□□ 1.03
LSM4-202ENST00000593564 ZNF17P17021 662 aa21.48■■□□□ 1.03
LSM4-202ENST00000593564 PRPH2P23942 346 aa21.48■■□□□ 1.03
LSM4-202ENST00000593564 LOXP28300 417 aaPredicted RBP21.48■■□□□ 1.03
LSM4-202ENST00000593564 MAP3K8P41279 467 aa21.48■■□□□ 1.03
LSM4-202ENST00000593564 DNAJB13P59910 316 aa21.48■■□□□ 1.03
LSM4-202ENST00000593564 SLC29A2Q14542 456 aa21.48■■□□□ 1.03
LSM4-202ENST00000593564 SGCBQ16585 318 aa21.48■■□□□ 1.03
LSM4-202ENST00000593564 PIK3R3Q92569 461 aa21.48■■□□□ 1.03
LSM4-202ENST00000593564 ARSGQ96EG1 525 aa21.48■■□□□ 1.03
LSM4-202ENST00000593564 HS3ST6Q96QI5 342 aa21.48■■□□□ 1.03
LSM4-202ENST00000593564 HHATLQ9HCP6 504 aa21.48■■□□□ 1.03
LSM4-202ENST00000593564 TNFRSF12AQ9NP84 129 aa21.48■■□□□ 1.03
LSM4-202ENST00000593564 A0A1W2PPM1 405 aa21.47■■□□□ 1.03
LSM4-202ENST00000593564 SHISA8B8ZZ34 492 aa21.47■■□□□ 1.03
LSM4-202ENST00000593564 NPIPB8E9PQR5 432 aa21.47■■□□□ 1.03
LSM4-202ENST00000593564 NGFRP08138 427 aa21.47■■□□□ 1.03
LSM4-202ENST00000593564 UROSP10746 265 aa21.47■■□□□ 1.03
LSM4-202ENST00000593564 PRPS2P11908 318 aa21.47■■□□□ 1.03
LSM4-202ENST00000593564 TBXA2RP21731 343 aa21.47■■□□□ 1.03
LSM4-202ENST00000593564 HSPB3Q12988 150 aa21.47■■□□□ 1.03
LSM4-202ENST00000593564 VPS26BQ4G0F5 336 aa21.47■■□□□ 1.03
LSM4-202ENST00000593564 CFAP157Q5JU67 520 aa21.47■■□□□ 1.03
LSM4-202ENST00000593564 C22orf34Q6ZV56 151 aa21.47■■□□□ 1.03
LSM4-202ENST00000593564 GPR151Q8TDV0 419 aa21.47■■□□□ 1.03
LSM4-202ENST00000593564 ZC3HAV1LQ96H79 300 aaKnown RBP21.47■■□□□ 1.03
LSM4-202ENST00000593564 EQTNQ9NQ60 294 aa21.47■■□□□ 1.03
LSM4-202ENST00000593564 VDAC3Q9Y277 283 aa21.47■■□□□ 1.03
LSM4-202ENST00000593564 EMC9Q9Y3B6 208 aa21.47■■□□□ 1.03
LSM4-202ENST00000593564 A0A087WZY1 265 aa21.46■■□□□ 1.03
LSM4-202ENST00000593564 ALG1L2C9J202 215 aa21.46■■□□□ 1.03
LSM4-202ENST00000593564 PDPK1O15530 556 aa21.46■■□□□ 1.03
LSM4-202ENST00000593564 GMFGO60234 142 aa21.46■■□□□ 1.03
LSM4-202ENST00000593564 SEC22BO75396 215 aa21.46■■□□□ 1.03
LSM4-202ENST00000593564 NKX2-2O95096 273 aa21.46■■□□□ 1.03
LSM4-202ENST00000593564 FAM153BP0C7A2 387 aa21.46■■□□□ 1.03
LSM4-202ENST00000593564 EIF1AXP47813 144 aaKnown RBP21.46■■□□□ 1.03
LSM4-202ENST00000593564 CCDC153Q494R4 210 aa21.46■■□□□ 1.03
LSM4-202ENST00000593564 FAM153CQ494X1 144 aa21.46■■□□□ 1.03
LSM4-202ENST00000593564 SH2D5Q6ZV89 423 aa21.46■■□□□ 1.03
LSM4-202ENST00000593564 CDRT4Q8N9R6 151 aa21.46■■□□□ 1.03
LSM4-202ENST00000593564 OR6K3Q8NGY3 331 aa21.46■■□□□ 1.03
LSM4-202ENST00000593564 Q96MF0 132 aa21.46■■□□□ 1.03
LSM4-202ENST00000593564 KLHL4Q9C0H6 718 aa21.46■■□□□ 1.03
LSM4-202ENST00000593564 PLSCR4Q9NRQ2 329 aa21.46■■□□□ 1.03
LSM4-202ENST00000593564 PAQR5Q9NXK6 330 aaPredicted RBP21.46■■□□□ 1.03
LSM4-202ENST00000593564 ROS1P08922 2347 aa21.46■■□□□ 1.03
LSM4-202ENST00000593564 H7C1Q1 480 aa21.45■■□□□ 1.02
LSM4-202ENST00000593564 EIF1AYO14602 144 aaKnown RBP21.45■■□□□ 1.02
LSM4-202ENST00000593564 PLIN3O60664 434 aa21.45■■□□□ 1.02
LSM4-202ENST00000593564 OXSR1O95747 527 aaPredicted RBP21.45■■□□□ 1.02
LSM4-202ENST00000593564 GPC1P35052 558 aa21.45■■□□□ 1.02
LSM4-202ENST00000593564 SLC6A8P48029 635 aa21.45■■□□□ 1.02
LSM4-202ENST00000593564 CPEB4Q17RY0 729 aaKnown RBP eCLIP21.45■■□□□ 1.02
LSM4-202ENST00000593564 ANKRD34AQ69YU3 496 aa21.45■■□□□ 1.02
LSM4-202ENST00000593564 YTHDF3Q7Z739 585 aaKnown RBP21.45■■□□□ 1.02
LSM4-202ENST00000593564 EXOC3L1Q86VI1 746 aa21.45■■□□□ 1.02
LSM4-202ENST00000593564 CIARTQ8N365 385 aaPredicted RBP21.45■■□□□ 1.02
LSM4-202ENST00000593564 GTPBP8Q8N3Z3 284 aaPredicted RBP21.45■■□□□ 1.02
LSM4-202ENST00000593564 CEP70Q8NHQ1 597 aa21.45■■□□□ 1.02
LSM4-202ENST00000593564 CIDECQ96AQ7 238 aaPredicted RBP21.45■■□□□ 1.02
LSM4-202ENST00000593564 GMPPAQ96IJ6 420 aaPredicted RBP21.45■■□□□ 1.02
LSM4-202ENST00000593564 ADGRG7Q96K78 797 aa21.45■■□□□ 1.02
LSM4-202ENST00000593564 PRRG4Q9BZD6 226 aa21.45■■□□□ 1.02
LSM4-202ENST00000593564 IQCGQ9H095 443 aaKnown RBP21.45■■□□□ 1.02
LSM4-202ENST00000593564 C1orf109Q9NX04 203 aa21.45■■□□□ 1.02
LSM4-202ENST00000593564 NTMQ9P121 344 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms