RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 OR2M3Q8NG83 312 aa11.95□□□□□ -0.5
H3F3B-213ENST00000593254 OR4K17Q8NGC6 315 aa11.95□□□□□ -0.5
H3F3B-213ENST00000593254 CLHC1Q8NHS4 586 aa11.95□□□□□ -0.5
H3F3B-213ENST00000593254 ZFP28Q8NHY6 868 aa11.95□□□□□ -0.5
H3F3B-213ENST00000593254 RNASE6Q93091 150 aaKnown RBP11.95□□□□□ -0.5
H3F3B-213ENST00000593254 LRRC46Q96FV0 321 aa11.95□□□□□ -0.5
H3F3B-213ENST00000593254 SFXN2Q96NB2 322 aa11.95□□□□□ -0.5
H3F3B-213ENST00000593254 G6PC3Q9BUM1 346 aa11.95□□□□□ -0.5
H3F3B-213ENST00000593254 TMEM109Q9BVC6 243 aa11.95□□□□□ -0.5
H3F3B-213ENST00000593254 RTN4RQ9BZR6 473 aa11.95□□□□□ -0.5
H3F3B-213ENST00000593254 ACSS1Q9NUB1 689 aaPredicted RBP11.95□□□□□ -0.5
H3F3B-213ENST00000593254 FAM120CQ9NX05 1096 aaKnown RBP11.95□□□□□ -0.5
H3F3B-213ENST00000593254 FLRT3Q9NZU0 649 aa11.95□□□□□ -0.5
H3F3B-213ENST00000593254 NTMQ9P121 344 aa11.95□□□□□ -0.5
H3F3B-213ENST00000593254 PPP4R1LQ9P1A2 415 aa11.95□□□□□ -0.5
H3F3B-213ENST00000593254 BAIAP2L1Q9UHR4 511 aa11.95□□□□□ -0.5
H3F3B-213ENST00000593254 FOXD3Q9UJU5 478 aaPredicted RBP11.95□□□□□ -0.5
H3F3B-213ENST00000593254 MRTO4Q9UKD2 239 aaKnown RBP11.95□□□□□ -0.5
H3F3B-213ENST00000593254 ANK3Q12955 4377 aaKnown RBP11.95□□□□□ -0.5
H3F3B-213ENST00000593254 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.94□□□□□ -0.5
H3F3B-213ENST00000593254 UQCRHLA0A096LP55 91 aa11.94□□□□□ -0.5
H3F3B-213ENST00000593254 TYROBPO43914 113 aa11.94□□□□□ -0.5
H3F3B-213ENST00000593254 NKX2-2O95096 273 aa11.94□□□□□ -0.5
H3F3B-213ENST00000593254 CREB1P16220 341 aa11.94□□□□□ -0.5
H3F3B-213ENST00000593254 GABRA3P34903 492 aa11.94□□□□□ -0.5
H3F3B-213ENST00000593254 GPC1P35052 558 aa11.94□□□□□ -0.5
H3F3B-213ENST00000593254 OPRM1P35372 400 aa11.94□□□□□ -0.5
H3F3B-213ENST00000593254 ETV4P43268 484 aa11.94□□□□□ -0.5
H3F3B-213ENST00000593254 STARP49675 285 aa11.94□□□□□ -0.5
H3F3B-213ENST00000593254 MANFP55145 182 aaKnown RBP11.94□□□□□ -0.5
H3F3B-213ENST00000593254 B3GALT5-AS1P59052 145 aa11.94□□□□□ -0.5
H3F3B-213ENST00000593254 SRYQ05066 204 aa11.94□□□□□ -0.5
H3F3B-213ENST00000593254 GANABQ14697 944 aaKnown RBP11.94□□□□□ -0.5
H3F3B-213ENST00000593254 FLYWCH1Q4VC44 716 aa11.94□□□□□ -0.5
H3F3B-213ENST00000593254 MTERF4Q7Z6M4 381 aaKnown RBP11.94□□□□□ -0.5
H3F3B-213ENST00000593254 MREGQ8N565 214 aa11.94□□□□□ -0.5
H3F3B-213ENST00000593254 OR6Y1Q8NGX8 325 aa11.94□□□□□ -0.5
H3F3B-213ENST00000593254 NUDT8Q8WV74 236 aa11.94□□□□□ -0.5
H3F3B-213ENST00000593254 MTERF3Q96E29 417 aa11.94□□□□□ -0.5
H3F3B-213ENST00000593254 GIMAP5Q96F15 307 aa11.94□□□□□ -0.5
H3F3B-213ENST00000593254 PPP3R2Q96LZ3 170 aa11.94□□□□□ -0.5
H3F3B-213ENST00000593254 ZFP3Q96NJ6 502 aa11.94□□□□□ -0.5
H3F3B-213ENST00000593254 TM9SF2Q99805 663 aa11.94□□□□□ -0.5
H3F3B-213ENST00000593254 DSN1Q9H410 356 aa11.94□□□□□ -0.5
H3F3B-213ENST00000593254 C3orf14Q9HBI5 128 aa11.94□□□□□ -0.5
H3F3B-213ENST00000593254 EQTNQ9NQ60 294 aa11.94□□□□□ -0.5
H3F3B-213ENST00000593254 JKAMPQ9P055 326 aa11.94□□□□□ -0.5
H3F3B-213ENST00000593254 SH3BP4Q9P0V3 963 aa11.94□□□□□ -0.5
H3F3B-213ENST00000593254 CLCF1Q9UBD9 225 aa11.94□□□□□ -0.5
H3F3B-213ENST00000593254 GXYLT2A0PJZ3 443 aa11.93□□□□□ -0.5
H3F3B-213ENST00000593254 CLCA1A8K7I4 914 aa11.93□□□□□ -0.5
H3F3B-213ENST00000593254 FAM171A2A8MVW0 826 aa11.93□□□□□ -0.5
H3F3B-213ENST00000593254 RCBTB2O95199 551 aa11.93□□□□□ -0.5
H3F3B-213ENST00000593254 KCNH1O95259 989 aa11.93□□□□□ -0.5
H3F3B-213ENST00000593254 SLU7O95391 586 aaKnown RBP11.93□□□□□ -0.5
H3F3B-213ENST00000593254 IGKV1D-16P01601 117 aa11.93□□□□□ -0.5
H3F3B-213ENST00000593254 BPGMP07738 259 aa11.93□□□□□ -0.5
H3F3B-213ENST00000593254 TMIGD3P0DMS9 266 aaPredicted RBP11.93□□□□□ -0.5
H3F3B-213ENST00000593254 RFX3P48380 749 aa11.93□□□□□ -0.5
H3F3B-213ENST00000593254 AGFG1P52594 562 aaKnown RBP11.93□□□□□ -0.5
H3F3B-213ENST00000593254 DAZAP2Q15038 168 aaPredicted RBP11.93□□□□□ -0.5
H3F3B-213ENST00000593254 BCL2A1Q16548 175 aa11.93□□□□□ -0.5
H3F3B-213ENST00000593254 VPS26BQ4G0F5 336 aa11.93□□□□□ -0.5
H3F3B-213ENST00000593254 LRIG3Q6UXM1 1119 aa11.93□□□□□ -0.5
H3F3B-213ENST00000593254 R3HCC1LQ7Z5L2 792 aaKnown RBP11.93□□□□□ -0.5
H3F3B-213ENST00000593254 CDRT4Q8N9R6 151 aa11.93□□□□□ -0.5
H3F3B-213ENST00000593254 NUP43Q8NFH3 380 aa11.93□□□□□ -0.5
H3F3B-213ENST00000593254 CEP70Q8NHQ1 597 aa11.93□□□□□ -0.5
H3F3B-213ENST00000593254 AGR3Q8TD06 166 aa11.93□□□□□ -0.5
H3F3B-213ENST00000593254 FAM222BQ8WU58 562 aa11.93□□□□□ -0.5
H3F3B-213ENST00000593254 PIK3R3Q92569 461 aa11.93□□□□□ -0.5
H3F3B-213ENST00000593254 WNT2BQ93097 391 aa11.93□□□□□ -0.5
H3F3B-213ENST00000593254 MS4A4EQ96PG1 132 aa11.93□□□□□ -0.5
H3F3B-213ENST00000593254 SFXN3Q9BWM7 321 aa11.93□□□□□ -0.5
H3F3B-213ENST00000593254 SDHAF3Q9NRP4 125 aa11.93□□□□□ -0.5
H3F3B-213ENST00000593254 MED11Q9P086 117 aa11.93□□□□□ -0.5
H3F3B-213ENST00000593254 GIMAP2Q9UG22 337 aa11.93□□□□□ -0.5
H3F3B-213ENST00000593254 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.93□□□□□ -0.5
H3F3B-213ENST00000593254 ATP6V1HQ9UI12 483 aa11.93□□□□□ -0.5
H3F3B-213ENST00000593254 V9GYY5 206 aaPredicted RBP11.93□□□□□ -0.5
H3F3B-213ENST00000593254 SONP18583 2426 aaKnown RBP11.92□□□□□ -0.5
H3F3B-213ENST00000593254 IGLV3-32A0A0A0MS00 114 aa11.92□□□□□ -0.5
H3F3B-213ENST00000593254 TMEM114B3SHH9 223 aa11.92□□□□□ -0.5
H3F3B-213ENST00000593254 EEF1E1-BLOC1S5C9J1V9 151 aa11.92□□□□□ -0.5
H3F3B-213ENST00000593254 SCAMP2O15127 329 aaKnown RBP11.92□□□□□ -0.5
H3F3B-213ENST00000593254 CTIFO43310 598 aaKnown RBP11.92□□□□□ -0.5
H3F3B-213ENST00000593254 EEF1E1O43324 174 aaKnown RBP11.92□□□□□ -0.5
H3F3B-213ENST00000593254 HCRTR2O43614 444 aa11.92□□□□□ -0.5
H3F3B-213ENST00000593254 PEX11AO75192 247 aa11.92□□□□□ -0.5
H3F3B-213ENST00000593254 UTS2O95399 124 aa11.92□□□□□ -0.5
H3F3B-213ENST00000593254 LY6G6DO95868 133 aa11.92□□□□□ -0.5
H3F3B-213ENST00000593254 ACP2P11117 423 aa11.92□□□□□ -0.5
H3F3B-213ENST00000593254 TCEA1P23193 301 aaKnown RBP11.92□□□□□ -0.5
H3F3B-213ENST00000593254 MAPK1P28482 360 aa11.92□□□□□ -0.5
H3F3B-213ENST00000593254 HPCAL1P37235 193 aa11.92□□□□□ -0.5
H3F3B-213ENST00000593254 CLK3P49761 638 aaKnown RBP11.92□□□□□ -0.5
H3F3B-213ENST00000593254 PRKAG1P54619 331 aa11.92□□□□□ -0.5
H3F3B-213ENST00000593254 PRR5P85299 388 aa11.92□□□□□ -0.5
H3F3B-213ENST00000593254 FOXF2Q12947 444 aa11.92□□□□□ -0.5
H3F3B-213ENST00000593254 STX5Q13190 355 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms