RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 RIMKLAQ8IXN7 391 aa18.63■□□□□ 0.57
CIRBP-226ENST00000590171 FAM110BQ8TC76 370 aa18.63■□□□□ 0.57
CIRBP-226ENST00000590171 PPP1R36Q96LQ0 422 aa18.63■□□□□ 0.57
CIRBP-226ENST00000590171 UCN2Q96RP3 112 aa18.63■□□□□ 0.57
CIRBP-226ENST00000590171 PTGES2Q9H7Z7 377 aa18.63■□□□□ 0.57
CIRBP-226ENST00000590171 ACTL7BQ9Y614 415 aa18.63■□□□□ 0.57
CIRBP-226ENST00000590171 MED12Q93074 2177 aa18.62■□□□□ 0.57
CIRBP-226ENST00000590171 HMGN2P05204 90 aaKnown RBP18.62■□□□□ 0.57
CIRBP-226ENST00000590171 TUBBP07437 444 aa18.62■□□□□ 0.57
CIRBP-226ENST00000590171 ALOX5P09917 674 aa18.62■□□□□ 0.57
CIRBP-226ENST00000590171 TMIGD3P0DMS9 266 aaPredicted RBP18.62■□□□□ 0.57
CIRBP-226ENST00000590171 PRIM2P49643 509 aa18.62■□□□□ 0.57
CIRBP-226ENST00000590171 DIO3P55073 304 aa18.62■□□□□ 0.57
CIRBP-226ENST00000590171 EMX2Q04743 252 aa18.62■□□□□ 0.57
CIRBP-226ENST00000590171 C17orf67Q0P5P2 114 aa18.62■□□□□ 0.57
CIRBP-226ENST00000590171 FOXF2Q12947 444 aa18.62■□□□□ 0.57
CIRBP-226ENST00000590171 GANABQ14697 944 aaKnown RBP18.62■□□□□ 0.57
CIRBP-226ENST00000590171 BCL2A1Q16548 175 aa18.62■□□□□ 0.57
CIRBP-226ENST00000590171 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.62■□□□□ 0.57
CIRBP-226ENST00000590171 ZCCHC12Q6PEW1 402 aa18.62■□□□□ 0.57
CIRBP-226ENST00000590171 OR5M1Q8NGP8 315 aa18.62■□□□□ 0.57
CIRBP-226ENST00000590171 OR4C3Q8NH37 302 aa18.62■□□□□ 0.57
CIRBP-226ENST00000590171 PSMA8Q8TAA3 256 aa18.62■□□□□ 0.57
CIRBP-226ENST00000590171 OR5P2Q8WZ92 322 aa18.62■□□□□ 0.57
CIRBP-226ENST00000590171 JADE3Q92613 823 aa18.62■□□□□ 0.57
CIRBP-226ENST00000590171 RNASE6Q93091 150 aaKnown RBP18.62■□□□□ 0.57
CIRBP-226ENST00000590171 WNT2BQ93097 391 aa18.62■□□□□ 0.57
CIRBP-226ENST00000590171 COQ8BQ96D53 544 aa18.62■□□□□ 0.57
CIRBP-226ENST00000590171 C1GALT1C1Q96EU7 318 aa18.62■□□□□ 0.57
CIRBP-226ENST00000590171 PGM2Q96G03 612 aa18.62■□□□□ 0.57
CIRBP-226ENST00000590171 SORT1Q99523 831 aa18.62■□□□□ 0.57
CIRBP-226ENST00000590171 CXorf36Q9H7Y0 433 aa18.62■□□□□ 0.57
CIRBP-226ENST00000590171 KCNK9Q9NPC2 374 aa18.62■□□□□ 0.57
CIRBP-226ENST00000590171 ATAD3AQ9NVI7 634 aa18.62■□□□□ 0.57
CIRBP-226ENST00000590171 FBXO34Q9NWN3 711 aa18.62■□□□□ 0.57
CIRBP-226ENST00000590171 EIF3LQ9Y262 564 aaKnown RBP18.62■□□□□ 0.57
CIRBP-226ENST00000590171 RAP2CQ9Y3L5 183 aa18.62■□□□□ 0.57
CIRBP-226ENST00000590171 SNX8Q9Y5X2 465 aa18.62■□□□□ 0.57
CIRBP-226ENST00000590171 INTS1Q8N201 2190 aaKnown RBP18.61■□□□□ 0.57
CIRBP-226ENST00000590171 IGLV3-32A0A0A0MS00 114 aa18.61■□□□□ 0.57
CIRBP-226ENST00000590171 ALG1L2C9J202 215 aa18.61■□□□□ 0.57
CIRBP-226ENST00000590171 HCRTR2O43614 444 aa18.61■□□□□ 0.57
CIRBP-226ENST00000590171 GMFGO60234 142 aa18.61■□□□□ 0.57
CIRBP-226ENST00000590171 ZWINTO95229 277 aa18.61■□□□□ 0.57
CIRBP-226ENST00000590171 OXSR1O95747 527 aaPredicted RBP18.61■□□□□ 0.57
CIRBP-226ENST00000590171 C6orf47O95873 294 aa18.61■□□□□ 0.57
CIRBP-226ENST00000590171 IL18BPO95998 194 aa18.61■□□□□ 0.57
CIRBP-226ENST00000590171 PRPS1L1P21108 318 aa18.61■□□□□ 0.57
CIRBP-226ENST00000590171 BGNP21810 368 aa18.61■□□□□ 0.57
CIRBP-226ENST00000590171 OPRM1P35372 400 aa18.61■□□□□ 0.57
CIRBP-226ENST00000590171 MAD2L1Q13257 205 aaPredicted RBP18.61■□□□□ 0.57
CIRBP-226ENST00000590171 LASP1Q14847 261 aaKnown RBP18.61■□□□□ 0.57
CIRBP-226ENST00000590171 CCNJQ5T5M9 372 aa18.61■□□□□ 0.57
CIRBP-226ENST00000590171 UBQLNLQ8IYU4 475 aa18.61■□□□□ 0.57
CIRBP-226ENST00000590171 NATD1Q8N6N6 113 aa18.61■□□□□ 0.57
CIRBP-226ENST00000590171 COX18Q8N8Q8 333 aa18.61■□□□□ 0.57
CIRBP-226ENST00000590171 TM9SF2Q99805 663 aa18.61■□□□□ 0.57
CIRBP-226ENST00000590171 ASIC5Q9NY37 505 aa18.61■□□□□ 0.57
CIRBP-226ENST00000590171 OR2M5A3KFT3 312 aa18.6■□□□□ 0.57
CIRBP-226ENST00000590171 EEF1E1-BLOC1S5C9J1V9 151 aa18.6■□□□□ 0.57
CIRBP-226ENST00000590171 EEF1E1O43324 174 aaKnown RBP18.6■□□□□ 0.57
CIRBP-226ENST00000590171 RCBTB2O95199 551 aa18.6■□□□□ 0.57
CIRBP-226ENST00000590171 NGFRP08138 427 aa18.6■□□□□ 0.57
CIRBP-226ENST00000590171 MYZAPP0CAP1 466 aa18.6■□□□□ 0.57
CIRBP-226ENST00000590171 PEPDP12955 493 aa18.6■□□□□ 0.57
CIRBP-226ENST00000590171 POU3F2P20265 443 aaPredicted RBP18.6■□□□□ 0.57
CIRBP-226ENST00000590171 SLC1A6P48664 564 aa18.6■□□□□ 0.57
CIRBP-226ENST00000590171 CLDN15P56746 228 aa18.6■□□□□ 0.57
CIRBP-226ENST00000590171 C21orf58P58505 322 aa18.6■□□□□ 0.57
CIRBP-226ENST00000590171 SMU1Q2TAY7 513 aa18.6■□□□□ 0.57
CIRBP-226ENST00000590171 CROCCP2Q86T23 111 aa18.6■□□□□ 0.57
CIRBP-226ENST00000590171 TMEM200AQ86VY9 491 aa18.6■□□□□ 0.57
CIRBP-226ENST00000590171 ZZZ3Q8IYH5 903 aa18.6■□□□□ 0.57
CIRBP-226ENST00000590171 GCNT2Q8N0V5 402 aa18.6■□□□□ 0.57
CIRBP-226ENST00000590171 LRRC46Q96FV0 321 aa18.6■□□□□ 0.57
CIRBP-226ENST00000590171 ZFP3Q96NJ6 502 aa18.6■□□□□ 0.57
CIRBP-226ENST00000590171 PRPF18Q99633 342 aaKnown RBP18.6■□□□□ 0.57
CIRBP-226ENST00000590171 DUSP26Q9BV47 211 aa18.6■□□□□ 0.57
CIRBP-226ENST00000590171 BHLHE41Q9C0J9 482 aaPredicted RBP18.6■□□□□ 0.57
CIRBP-226ENST00000590171 AKTIPQ9H8T0 292 aa18.6■□□□□ 0.57
CIRBP-226ENST00000590171 DUSP22Q9NRW4 184 aa18.6■□□□□ 0.57
CIRBP-226ENST00000590171 NOP53Q9NZM5 478 aaKnown RBP18.6■□□□□ 0.57
CIRBP-226ENST00000590171 JKAMPQ9P055 326 aa18.6■□□□□ 0.57
CIRBP-226ENST00000590171 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.6■□□□□ 0.57
CIRBP-226ENST00000590171 ZNF337Q9Y3M9 751 aa18.6■□□□□ 0.57
CIRBP-226ENST00000590171 H0YC42 278 aa18.59■□□□□ 0.57
CIRBP-226ENST00000590171 NDUFB5O43674 189 aa18.59■□□□□ 0.57
CIRBP-226ENST00000590171 TGM6O95932 706 aa18.59■□□□□ 0.57
CIRBP-226ENST00000590171 TBXA2RP21731 343 aa18.59■□□□□ 0.57
CIRBP-226ENST00000590171 PEX19P40855 299 aa18.59■□□□□ 0.57
CIRBP-226ENST00000590171 KIR2DL3P43628 341 aa18.59■□□□□ 0.57
CIRBP-226ENST00000590171 CCT3P49368 545 aaKnown RBP18.59■□□□□ 0.57
CIRBP-226ENST00000590171 RPL14P50914 215 aaKnown RBP18.59■□□□□ 0.57
CIRBP-226ENST00000590171 TPD52P55327 224 aaPredicted RBP18.59■□□□□ 0.57
CIRBP-226ENST00000590171 CLDN8P56748 225 aa18.59■□□□□ 0.57
CIRBP-226ENST00000590171 POU6F2P78424 691 aaPredicted RBP18.59■□□□□ 0.57
CIRBP-226ENST00000590171 TP53BP2Q13625 1128 aa18.59■□□□□ 0.57
CIRBP-226ENST00000590171 LSM12Q3MHD2 195 aaKnown RBP18.59■□□□□ 0.57
CIRBP-226ENST00000590171 CDC73Q6P1J9 531 aa18.59■□□□□ 0.57
CIRBP-226ENST00000590171 CAMKMTQ7Z624 323 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms