RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 B4DGG1 531 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 M0R129 80 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 CYR61O00622 381 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 FGF17O60258 216 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 FMO6PO60774 539 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 ENTPD6O75354 484 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 NADKO95544 446 aaPredicted RBP9.27□□□□□ -0.93
VPS25-202ENST00000589219 CER1O95813 267 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 EIF2S1P05198 315 aaKnown RBP9.27□□□□□ -0.93
VPS25-202ENST00000589219 C1QTNF9P0C862 333 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 ZNF883P0CG24 379 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 DBTP11182 482 aaKnown RBP9.27□□□□□ -0.93
VPS25-202ENST00000589219 PVRP15151 417 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 NME1P15531 152 aaKnown RBP9.27□□□□□ -0.93
VPS25-202ENST00000589219 SPINK2P20155 84 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 NT5EP21589 574 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 CDH3P22223 829 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 FPR3P25089 353 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 CD27P26842 260 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 CSTF2P33240 577 aaKnown RBP eCLIP9.27□□□□□ -0.93
VPS25-202ENST00000589219 LIPAP38571 399 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 STAT5AP42229 794 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 CAPZBP47756 277 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 FASLGP48023 281 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 BMXP51813 675 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 VSX2P58304 361 aaPredicted RBP9.27□□□□□ -0.93
VPS25-202ENST00000589219 VBP1P61758 197 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 EEF1A1P68104 462 aaKnown RBP9.27□□□□□ -0.93
VPS25-202ENST00000589219 ZNF155Q12901 538 aaPredicted RBP9.27□□□□□ -0.93
VPS25-202ENST00000589219 NCF4Q15080 339 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 TRIP6Q15654 476 aaKnown RBP9.27□□□□□ -0.93
VPS25-202ENST00000589219 DUSP5Q16690 384 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 C6orf132Q5T0Z8 1188 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 DCST2Q5T1A1 773 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.27□□□□□ -0.93
VPS25-202ENST00000589219 C16orf87Q6PH81 154 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 ZNF730Q6ZMV8 503 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 ZNF836Q6ZNA1 936 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 OLIG3Q7RTU3 272 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 ZER1Q7Z7L7 766 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 MRGPREQ86SM8 312 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 GKN2Q86XP6 184 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 NLGN4XQ8N0W4 816 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 CYP4Z2PQ8N1L4 340 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 CLDN22Q8N7P3 220 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 COX18Q8N8Q8 333 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 SLC16A11Q8NCK7 471 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 WDR36Q8NI36 951 aaKnown RBP9.27□□□□□ -0.93
VPS25-202ENST00000589219 SLC9A6Q92581 669 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 COL26A1Q96A83 441 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 LGALS12Q96DT0 336 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 TMEM80Q96HE8 168 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 PLEKHA8Q96JA3 519 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 SLC38A2Q96QD8 506 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 ORAI3Q9BRQ5 295 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 MND1Q9BWT6 205 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.27□□□□□ -0.93
VPS25-202ENST00000589219 SAP130Q9H0E3 1048 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 KLHL25Q9H0H3 589 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 AKIP1Q9NQ31 210 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 C14orf105Q9NVL8 296 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 TBCCD1Q9NVR7 557 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 MAT2BQ9NZL9 334 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 OSGIN1Q9UJX0 560 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.27□□□□□ -0.93
VPS25-202ENST00000589219 MRPS33Q9Y291 106 aaKnown RBP9.27□□□□□ -0.93
VPS25-202ENST00000589219 MRPS2Q9Y399 296 aaKnown RBP9.27□□□□□ -0.93
VPS25-202ENST00000589219 MSRB2Q9Y3D2 182 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 PCDHGA3Q9Y5H0 932 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 CFAP47Q6ZTR5 3102 aa9.27□□□□□ -0.93
VPS25-202ENST00000589219 A0A087WUU8 490 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 AGAP5A6NIR3 686 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 CPSF4LA6NMK7 179 aaKnown RBP9.26□□□□□ -0.93
VPS25-202ENST00000589219 CCRL2O00421 344 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 HYAL3O43820 417 aaPredicted RBP9.26□□□□□ -0.93
VPS25-202ENST00000589219 SRPX2O60687 465 aaPredicted RBP9.26□□□□□ -0.93
VPS25-202ENST00000589219 STX11O75558 287 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 ZIC2O95409 532 aaPredicted RBP9.26□□□□□ -0.93
VPS25-202ENST00000589219 SLC35E2P0CK97 266 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 NID1P14543 1247 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 TNNI3P19429 210 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 ENDOUP21128 410 aaKnown RBP9.26□□□□□ -0.93
VPS25-202ENST00000589219 NR4A1P22736 598 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 GADD45AP24522 165 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 OPRL1P41146 370 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 AVPR1BP47901 424 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 AFF3P51826 1226 aaKnown RBP9.26□□□□□ -0.93
VPS25-202ENST00000589219 NCS1P62166 190 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 POU6F2P78424 691 aaPredicted RBP9.26□□□□□ -0.93
VPS25-202ENST00000589219 CDK5Q00535 292 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 C1DQ13901 141 aaKnown RBP9.26□□□□□ -0.93
VPS25-202ENST00000589219 GINS1Q14691 196 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 NR1D2Q14995 579 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 ZSWIM7Q19AV6 140 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 PRICKLE4Q2TBC4 344 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 PRTGQ2VWP7 1150 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 ARMCX4Q5H9R4 360 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 SLC27A4Q6P1M0 643 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 MBOAT2Q6ZWT7 520 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 RRM2BQ7LG56 351 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms