RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 FOXA1P55317 472 aa10.44□□□□□ -0.74
LIG3-207ENST00000586119 SLC18A2Q05940 514 aa10.44□□□□□ -0.74
LIG3-207ENST00000586119 C2orf80Q0P641 193 aa10.44□□□□□ -0.74
LIG3-207ENST00000586119 ZNF155Q12901 538 aaPredicted RBP10.44□□□□□ -0.74
LIG3-207ENST00000586119 CAPRIN1Q14444 709 aaKnown RBP10.44□□□□□ -0.74
LIG3-207ENST00000586119 GUSBP1Q15486 140 aa10.44□□□□□ -0.74
LIG3-207ENST00000586119 TNFAIP8L3Q5GJ75 292 aa10.44□□□□□ -0.74
LIG3-207ENST00000586119 OR2A2Q6IF42 318 aa10.44□□□□□ -0.74
LIG3-207ENST00000586119 TMEM107Q6UX40 140 aa10.44□□□□□ -0.74
LIG3-207ENST00000586119 GALNT10Q86SR1 603 aa10.44□□□□□ -0.74
LIG3-207ENST00000586119 FAM9CQ8IZT9 166 aa10.44□□□□□ -0.74
LIG3-207ENST00000586119 MEIOBQ8N635 442 aa10.44□□□□□ -0.74
LIG3-207ENST00000586119 CDC26Q8NHZ8 85 aa10.44□□□□□ -0.74
LIG3-207ENST00000586119 METTL6Q8TCB7 284 aa10.44□□□□□ -0.74
LIG3-207ENST00000586119 IGFBPL1Q8WX77 278 aa10.44□□□□□ -0.74
LIG3-207ENST00000586119 C11orf24Q96F05 449 aaPredicted RBP10.44□□□□□ -0.74
LIG3-207ENST00000586119 BDH2Q9BUT1 245 aa10.44□□□□□ -0.74
LIG3-207ENST00000586119 NMRK1Q9NWW6 199 aa10.44□□□□□ -0.74
LIG3-207ENST00000586119 ELOVL5Q9NYP7 299 aa10.44□□□□□ -0.74
LIG3-207ENST00000586119 ACTL7BQ9Y614 415 aa10.44□□□□□ -0.74
LIG3-207ENST00000586119 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.43□□□□□ -0.74
LIG3-207ENST00000586119 MYO1GB0I1T2 1018 aa10.43□□□□□ -0.74
LIG3-207ENST00000586119 ULK1O75385 1050 aa10.43□□□□□ -0.74
LIG3-207ENST00000586119 CNOT4O95628 575 aaKnown RBP10.43□□□□□ -0.74
LIG3-207ENST00000586119 NTN1O95631 604 aa10.43□□□□□ -0.74
LIG3-207ENST00000586119 KRT6AP02538 564 aa10.43□□□□□ -0.74
LIG3-207ENST00000586119 KRT6BP04259 564 aa10.43□□□□□ -0.74
LIG3-207ENST00000586119 CD8BP10966 210 aa10.43□□□□□ -0.74
LIG3-207ENST00000586119 PYGBP11216 843 aa10.43□□□□□ -0.74
LIG3-207ENST00000586119 KRT4P19013 534 aa10.43□□□□□ -0.74
LIG3-207ENST00000586119 FPR1P21462 350 aa10.43□□□□□ -0.74
LIG3-207ENST00000586119 HMOX2P30519 316 aa10.43□□□□□ -0.74
LIG3-207ENST00000586119 TIA1P31483 386 aaKnown RBP eCLIP10.43□□□□□ -0.74
LIG3-207ENST00000586119 CRHR1P34998 444 aa10.43□□□□□ -0.74
LIG3-207ENST00000586119 KRT6CP48668 564 aa10.43□□□□□ -0.74
LIG3-207ENST00000586119 NCBP2P52298 156 aaKnown RBP eCLIP10.43□□□□□ -0.74
LIG3-207ENST00000586119 ACSM2AQ08AH3 577 aa10.43□□□□□ -0.74
LIG3-207ENST00000586119 CSTF3Q12996 717 aaKnown RBP10.43□□□□□ -0.74
LIG3-207ENST00000586119 ACSM2BQ68CK6 577 aa10.43□□□□□ -0.74
LIG3-207ENST00000586119 PPP4R4Q6NUP7 873 aa10.43□□□□□ -0.74
LIG3-207ENST00000586119 PRSS57Q6UWY2 283 aa10.43□□□□□ -0.74
LIG3-207ENST00000586119 GPRIN3Q6ZVF9 776 aa10.43□□□□□ -0.74
LIG3-207ENST00000586119 GGNQ86UU5 652 aa10.43□□□□□ -0.74
LIG3-207ENST00000586119 EXOC3L1Q86VI1 746 aa10.43□□□□□ -0.74
LIG3-207ENST00000586119 MAPK1IP1LQ8NDC0 245 aa10.43□□□□□ -0.74
LIG3-207ENST00000586119 C1GALT1C1Q96EU7 318 aa10.43□□□□□ -0.74
LIG3-207ENST00000586119 BBS4Q96RK4 519 aa10.43□□□□□ -0.74
LIG3-207ENST00000586119 SLC39A3Q9BRY0 314 aa10.43□□□□□ -0.74
LIG3-207ENST00000586119 GLIPR2Q9H4G4 154 aa10.43□□□□□ -0.74
LIG3-207ENST00000586119 SSU72Q9NP77 194 aaKnown RBP10.43□□□□□ -0.74
LIG3-207ENST00000586119 TAS2R9Q9NYW1 312 aa10.43□□□□□ -0.74
LIG3-207ENST00000586119 GRID1Q9ULK0 1009 aa10.43□□□□□ -0.74
LIG3-207ENST00000586119 PROCRQ9UNN8 238 aa10.43□□□□□ -0.74
LIG3-207ENST00000586119 NUP214P35658 2090 aaPredicted RBP10.43□□□□□ -0.74
LIG3-207ENST00000586119 CR1P17927 2039 aa10.43□□□□□ -0.74
LIG3-207ENST00000586119 CHD3Q12873 2000 aaKnown RBP10.43□□□□□ -0.74
LIG3-207ENST00000586119 SONP18583 2426 aaKnown RBP10.43□□□□□ -0.74
LIG3-207ENST00000586119 CADP27708 2225 aa10.42□□□□□ -0.74
LIG3-207ENST00000586119 FBN1P35555 2871 aaKnown RBP10.42□□□□□ -0.74
LIG3-207ENST00000586119 FAM171A2A8MVW0 826 aa10.42□□□□□ -0.74
LIG3-207ENST00000586119 GOLGA8RI6L899 631 aa10.42□□□□□ -0.74
LIG3-207ENST00000586119 UBFD1O14562 309 aaKnown RBP10.42□□□□□ -0.74
LIG3-207ENST00000586119 COPEO14579 308 aa10.42□□□□□ -0.74
LIG3-207ENST00000586119 ATP8B1O43520 1251 aa10.42□□□□□ -0.74
LIG3-207ENST00000586119 UTS2O95399 124 aa10.42□□□□□ -0.74
LIG3-207ENST00000586119 ANXA4P09525 319 aaPredicted RBP10.42□□□□□ -0.74
LIG3-207ENST00000586119 HSD3B1P14060 373 aa10.42□□□□□ -0.74
LIG3-207ENST00000586119 IMPDH1P20839 514 aa10.42□□□□□ -0.74
LIG3-207ENST00000586119 HSD3B2P26439 372 aa10.42□□□□□ -0.74
LIG3-207ENST00000586119 MPIP34949 423 aa10.42□□□□□ -0.74
LIG3-207ENST00000586119 PCYT1AP49585 367 aa10.42□□□□□ -0.74
LIG3-207ENST00000586119 HEPACAMQ14CZ8 416 aa10.42□□□□□ -0.74
LIG3-207ENST00000586119 SGCBQ16585 318 aa10.42□□□□□ -0.74
LIG3-207ENST00000586119 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.42□□□□□ -0.74
LIG3-207ENST00000586119 TMEM44Q2T9K0 475 aa10.42□□□□□ -0.74
LIG3-207ENST00000586119 CTU2Q2VPK5 515 aaKnown RBP10.42□□□□□ -0.74
LIG3-207ENST00000586119 GRAMD1BQ3KR37 738 aa10.42□□□□□ -0.74
LIG3-207ENST00000586119 CCDC153Q494R4 210 aa10.42□□□□□ -0.74
LIG3-207ENST00000586119 ALKBH2Q6NS38 261 aa10.42□□□□□ -0.74
LIG3-207ENST00000586119 STAC2Q6ZMT1 411 aa10.42□□□□□ -0.74
LIG3-207ENST00000586119 BANPQ8N9N5 519 aa10.42□□□□□ -0.74
LIG3-207ENST00000586119 PIK3R3Q92569 461 aa10.42□□□□□ -0.74
LIG3-207ENST00000586119 SLC9A6Q92581 669 aa10.42□□□□□ -0.74
LIG3-207ENST00000586119 ERP27Q96DN0 273 aa10.42□□□□□ -0.74
LIG3-207ENST00000586119 ELP4Q96EB1 424 aa10.42□□□□□ -0.74
LIG3-207ENST00000586119 APOPT1Q96IL0 206 aa10.42□□□□□ -0.74
LIG3-207ENST00000586119 ZNF382Q96SR6 550 aa10.42□□□□□ -0.74
LIG3-207ENST00000586119 GSX2Q9BZM3 304 aa10.42□□□□□ -0.74
LIG3-207ENST00000586119 TMBIM4Q9HC24 238 aa10.42□□□□□ -0.74
LIG3-207ENST00000586119 TNFRSF12AQ9NP84 129 aa10.42□□□□□ -0.74
LIG3-207ENST00000586119 PLSCR4Q9NRQ2 329 aa10.42□□□□□ -0.74
LIG3-207ENST00000586119 GIMAP4Q9NUV9 329 aa10.42□□□□□ -0.74
LIG3-207ENST00000586119 MID2Q9UJV3 735 aa10.42□□□□□ -0.74
LIG3-207ENST00000586119 C19orf53Q9UNZ5 99 aaPredicted RBP10.42□□□□□ -0.74
LIG3-207ENST00000586119 VDAC3Q9Y277 283 aa10.42□□□□□ -0.74
LIG3-207ENST00000586119 POLR3HQ9Y535 204 aaPredicted RBP10.42□□□□□ -0.74
LIG3-207ENST00000586119 ABCA1O95477 2261 aa10.41□□□□□ -0.74
LIG3-207ENST00000586119 EIF1AYO14602 144 aaKnown RBP10.41□□□□□ -0.74
LIG3-207ENST00000586119 PSMG1O95456 288 aa10.41□□□□□ -0.74
LIG3-207ENST00000586119 IL33O95760 270 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms