RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 DOCK9Q9BZ29 2069 aa13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 C2orf92A0A1B0GVN3 265 aa13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 FAM240BA0A1B0GVZ2 78 aa13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 GSAPA4D1B5 854 aa13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 CD8B2A6NJW9 211 aa13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 OR52A4PA6NMU1 304 aa13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 SGK494L7N484 410 aa13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 PIP5K1CO60331 668 aa13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 SNRNP200O75643 2136 aaKnown RBP13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 SLC2A10O95528 541 aa13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 HMGN1P05114 100 aa13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 CD8BP10966 210 aa13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 ERP29P30040 261 aaKnown RBP13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 ATP6V1E1P36543 226 aa13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 CAMK1Q14012 370 aa13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 KRT33BQ14525 404 aa13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 IRF4Q15306 451 aa13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 FAM78AQ5JUQ0 283 aa13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 TRILQ7L0X0 811 aa13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 CACUL1Q86Y37 369 aa13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 KLBQ86Z14 1044 aa13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 YIPF7Q8N8F6 280 aa13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 TOR1AIP2Q8NFQ8 470 aa13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 KAT2AQ92830 837 aa13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 TIMM29Q9BSF4 260 aa13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 MARVELD1Q9BSK0 173 aa13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 TRIM45Q9H8W5 580 aaPredicted RBP13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 HINT3Q9NQE9 182 aaKnown RBP13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 H2AFY2Q9P0M6 372 aaPredicted RBP13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 NLKQ9UBE8 527 aa13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 TNFRSF10DQ9UBN6 386 aa13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 APOBEC3BQ9UH17 382 aaKnown RBP13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 IL20RAQ9UHF4 553 aa13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 ALG5Q9Y673 324 aa13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 ZNF780BQ9Y6R6 833 aa13.26□□□□□ -0.29
CDK5RAP3-237ENST00000585163 MDC1Q14676 2089 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP3-237ENST00000585163 OR6C70A6NIJ9 312 aa13.25□□□□□ -0.29
CDK5RAP3-237ENST00000585163 CDC42EP2O14613 210 aa13.25□□□□□ -0.29
CDK5RAP3-237ENST00000585163 NDUFV2P19404 249 aa13.25□□□□□ -0.29
CDK5RAP3-237ENST00000585163 CLDN20P56880 219 aa13.25□□□□□ -0.29
CDK5RAP3-237ENST00000585163 BDH1Q02338 343 aa13.25□□□□□ -0.29
CDK5RAP3-237ENST00000585163 FAPQ12884 760 aa13.25□□□□□ -0.29
CDK5RAP3-237ENST00000585163 SF3A2Q15428 464 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP3-237ENST00000585163 LTB4RQ15722 352 aa13.25□□□□□ -0.29
CDK5RAP3-237ENST00000585163 FRRS1Q6ZNA5 592 aa13.25□□□□□ -0.29
CDK5RAP3-237ENST00000585163 CPOQ8IVL8 374 aa13.25□□□□□ -0.29
CDK5RAP3-237ENST00000585163 SIRT6Q8N6T7 355 aa13.25□□□□□ -0.29
CDK5RAP3-237ENST00000585163 GRPEL2Q8TAA5 225 aa13.25□□□□□ -0.29
CDK5RAP3-237ENST00000585163 ADAMTS15Q8TE58 950 aa13.25□□□□□ -0.29
CDK5RAP3-237ENST00000585163 UPRTQ96BW1 309 aa13.25□□□□□ -0.29
CDK5RAP3-237ENST00000585163 ACOXLQ9NUZ1 547 aa13.25□□□□□ -0.29
CDK5RAP3-237ENST00000585163 THAP10Q9P2Z0 257 aaPredicted RBP13.25□□□□□ -0.29
CDK5RAP3-237ENST00000585163 ZMAT5Q9UDW3 170 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP3-237ENST00000585163 ADAM30Q9UKF2 790 aa13.25□□□□□ -0.29
CDK5RAP3-237ENST00000585163 CLCA3PQ9Y6N3 262 aa13.25□□□□□ -0.29
CDK5RAP3-237ENST00000585163 C5orf42Q9H799 3197 aa13.25□□□□□ -0.29
CDK5RAP3-237ENST00000585163 DUXAA6NLW8 204 aa13.24□□□□□ -0.29
CDK5RAP3-237ENST00000585163 SOCS6O14544 535 aa13.24□□□□□ -0.29
CDK5RAP3-237ENST00000585163 MID1O15344 667 aa13.24□□□□□ -0.29
CDK5RAP3-237ENST00000585163 SLC19A2O60779 497 aa13.24□□□□□ -0.29
CDK5RAP3-237ENST00000585163 FOSL1P15407 271 aa13.24□□□□□ -0.29
CDK5RAP3-237ENST00000585163 TEAD1P28347 426 aa13.24□□□□□ -0.29
CDK5RAP3-237ENST00000585163 PEBP1P30086 187 aaKnown RBP13.24□□□□□ -0.29
CDK5RAP3-237ENST00000585163 RNF144AP50876 292 aaPredicted RBP13.24□□□□□ -0.29
CDK5RAP3-237ENST00000585163 EFR3AQ14156 821 aa13.24□□□□□ -0.29
CDK5RAP3-237ENST00000585163 FAM214AQ32MH5 1076 aa13.24□□□□□ -0.29
CDK5RAP3-237ENST00000585163 SNAP47Q5SQN1 464 aa13.24□□□□□ -0.29
CDK5RAP3-237ENST00000585163 MFSD9Q8NBP5 474 aa13.24□□□□□ -0.29
CDK5RAP3-237ENST00000585163 SLC16A11Q8NCK7 471 aa13.24□□□□□ -0.29
CDK5RAP3-237ENST00000585163 GANCQ8TET4 914 aa13.24□□□□□ -0.29
CDK5RAP3-237ENST00000585163 OTULINQ96BN8 352 aa13.24□□□□□ -0.29
CDK5RAP3-237ENST00000585163 C6orf106Q9H6K1 298 aaPredicted RBP13.24□□□□□ -0.29
CDK5RAP3-237ENST00000585163 IL23AQ9NPF7 189 aa13.24□□□□□ -0.29
CDK5RAP3-237ENST00000585163 PHPT1Q9NRX4 125 aaPredicted RBP13.24□□□□□ -0.29
CDK5RAP3-237ENST00000585163 SPHK1Q9NYA1 384 aa13.24□□□□□ -0.29
CDK5RAP3-237ENST00000585163 ZNF443Q9Y2A4 671 aaPredicted RBP13.24□□□□□ -0.29
CDK5RAP3-237ENST00000585163 PLEKHM1Q9Y4G2 1056 aa13.24□□□□□ -0.29
CDK5RAP3-237ENST00000585163 PRR19A6NJB7 356 aa13.24□□□□□ -0.29
CDK5RAP3-237ENST00000585163 ALX3O95076 343 aa13.24□□□□□ -0.29
CDK5RAP3-237ENST00000585163 PAK4O96013 591 aaPredicted RBP13.24□□□□□ -0.29
CDK5RAP3-237ENST00000585163 ASGR2P07307 311 aa13.24□□□□□ -0.29
CDK5RAP3-237ENST00000585163 GCGRP47871 477 aa13.24□□□□□ -0.29
CDK5RAP3-237ENST00000585163 CTBP2P56545 445 aa13.24□□□□□ -0.29
CDK5RAP3-237ENST00000585163 COL9A2Q14055 689 aaPredicted RBP13.24□□□□□ -0.29
CDK5RAP3-237ENST00000585163 FGL2Q14314 439 aa13.24□□□□□ -0.29
CDK5RAP3-237ENST00000585163 MFSD12Q6NUT3 480 aa13.24□□□□□ -0.29
CDK5RAP3-237ENST00000585163 NRROSQ86YC3 692 aa13.24□□□□□ -0.29
CDK5RAP3-237ENST00000585163 ZFAND1Q8TCF1 268 aa13.24□□□□□ -0.29
CDK5RAP3-237ENST00000585163 SP7Q8TDD2 431 aaPredicted RBP13.24□□□□□ -0.29
CDK5RAP3-237ENST00000585163 ACOT12Q8WYK0 555 aa13.24□□□□□ -0.29
CDK5RAP3-237ENST00000585163 SAMD8Q96LT4 415 aa13.24□□□□□ -0.29
CDK5RAP3-237ENST00000585163 GON7Q9BXV9 100 aa13.24□□□□□ -0.29
CDK5RAP3-237ENST00000585163 UBQLN3Q9H347 655 aa13.24□□□□□ -0.29
CDK5RAP3-237ENST00000585163 MTHFD2LQ9H903 347 aaPredicted RBP13.24□□□□□ -0.29
CDK5RAP3-237ENST00000585163 ISG20L2Q9H9L3 353 aaKnown RBP13.24□□□□□ -0.29
CDK5RAP3-237ENST00000585163 NTMQ9P121 344 aa13.24□□□□□ -0.29
CDK5RAP3-237ENST00000585163 GTPBP1O00178 669 aaKnown RBP13.23□□□□□ -0.29
CDK5RAP3-237ENST00000585163 DVL2O14641 736 aa13.23□□□□□ -0.29
CDK5RAP3-237ENST00000585163 SLC43A1O75387 559 aa13.23□□□□□ -0.29
CDK5RAP3-237ENST00000585163 POU2F2P09086 479 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms