RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 CCDC124Q96CT7 223 aaKnown RBP14.26□□□□□ -0.13
SS18-216ENST00000580751 LRGUKQ96M69 825 aa14.26□□□□□ -0.13
SS18-216ENST00000580751 COL21A1Q96P44 957 aa14.26□□□□□ -0.13
SS18-216ENST00000580751 DENND2DQ9H6A0 471 aaPredicted RBP14.26□□□□□ -0.13
SS18-216ENST00000580751 KLHL1Q9NR64 748 aa14.26□□□□□ -0.13
SS18-216ENST00000580751 SACM1LQ9NTJ5 587 aa14.26□□□□□ -0.13
SS18-216ENST00000580751 CALML5Q9NZT1 146 aa14.26□□□□□ -0.13
SS18-216ENST00000580751 CNIH4Q9P003 139 aa14.26□□□□□ -0.13
SS18-216ENST00000580751 PCDHGA10Q9Y5H3 936 aa14.26□□□□□ -0.13
SS18-216ENST00000580751 GSTA4O15217 222 aa14.25□□□□□ -0.13
SS18-216ENST00000580751 HS6ST1O60243 411 aa14.25□□□□□ -0.13
SS18-216ENST00000580751 TSPAN2O60636 221 aa14.25□□□□□ -0.13
SS18-216ENST00000580751 SORBS2O94875 1100 aaKnown RBP14.25□□□□□ -0.13
SS18-216ENST00000580751 IFNA14P01570 189 aa14.25□□□□□ -0.13
SS18-216ENST00000580751 P04436 131 aa14.25□□□□□ -0.13
SS18-216ENST00000580751 ARAFP10398 606 aa14.25□□□□□ -0.13
SS18-216ENST00000580751 TCN1P20061 433 aaPredicted RBP14.25□□□□□ -0.13
SS18-216ENST00000580751 MAN2A2P49641 1150 aa14.25□□□□□ -0.13
SS18-216ENST00000580751 PNLIPRP2P54317 469 aa14.25□□□□□ -0.13
SS18-216ENST00000580751 RPS26P62854 115 aaKnown RBP14.25□□□□□ -0.13
SS18-216ENST00000580751 POU6F2P78424 691 aaPredicted RBP14.25□□□□□ -0.13
SS18-216ENST00000580751 ELF3P78545 371 aaPredicted RBP14.25□□□□□ -0.13
SS18-216ENST00000580751 MS4A2Q01362 244 aa14.25□□□□□ -0.13
SS18-216ENST00000580751 TBCELQ5QJ74 424 aa14.25□□□□□ -0.13
SS18-216ENST00000580751 ATAD3BQ5T9A4 648 aa14.25□□□□□ -0.13
SS18-216ENST00000580751 AP1ARQ63HQ0 302 aa14.25□□□□□ -0.13
SS18-216ENST00000580751 SLC22A10Q63ZE4 541 aa14.25□□□□□ -0.13
SS18-216ENST00000580751 AAGABQ6PD74 315 aa14.25□□□□□ -0.13
SS18-216ENST00000580751 CCDC80Q76M96 950 aa14.25□□□□□ -0.13
SS18-216ENST00000580751 GALNTL5Q7Z4T8 443 aa14.25□□□□□ -0.13
SS18-216ENST00000580751 IFNEQ86WN2 208 aa14.25□□□□□ -0.13
SS18-216ENST00000580751 PTOV1Q86YD1 416 aa14.25□□□□□ -0.13
SS18-216ENST00000580751 BCORP1Q8N888 145 aa14.25□□□□□ -0.13
SS18-216ENST00000580751 Q8NA96 180 aa14.25□□□□□ -0.13
SS18-216ENST00000580751 OR4N2Q8NGD1 307 aa14.25□□□□□ -0.13
SS18-216ENST00000580751 OR5M3Q8NGP4 307 aa14.25□□□□□ -0.13
SS18-216ENST00000580751 PIK3R3Q92569 461 aa14.25□□□□□ -0.13
SS18-216ENST00000580751 DIO2Q92813 273 aa14.25□□□□□ -0.13
SS18-216ENST00000580751 CDS1Q92903 461 aa14.25□□□□□ -0.13
SS18-216ENST00000580751 TMCO6Q96DC7 493 aa14.25□□□□□ -0.13
SS18-216ENST00000580751 RMND5BQ96G75 393 aaPredicted RBP14.25□□□□□ -0.13
SS18-216ENST00000580751 RNF145Q96MT1 663 aa14.25□□□□□ -0.13
SS18-216ENST00000580751 OR7D2Q96RA2 312 aa14.25□□□□□ -0.13
SS18-216ENST00000580751 ADOQ96SZ5 270 aa14.25□□□□□ -0.13
SS18-216ENST00000580751 BTBD2Q9BX70 525 aa14.25□□□□□ -0.13
SS18-216ENST00000580751 SH2D2AQ9NP31 389 aa14.25□□□□□ -0.13
SS18-216ENST00000580751 EXD2Q9NVH0 621 aa14.25□□□□□ -0.13
SS18-216ENST00000580751 LUZP4Q9P127 313 aa14.25□□□□□ -0.13
SS18-216ENST00000580751 P2RX2Q9UBL9 471 aa14.25□□□□□ -0.13
SS18-216ENST00000580751 CHCHD2Q9Y6H1 151 aaPredicted RBP14.25□□□□□ -0.13
SS18-216ENST00000580751 EXPH5Q8NEV8 1989 aa14.25□□□□□ -0.13
SS18-216ENST00000580751 GXYLT2A0PJZ3 443 aa14.24□□□□□ -0.13
SS18-216ENST00000580751 KLRC4-KLRK1H3BQV0 150 aa14.24□□□□□ -0.13
SS18-216ENST00000580751 HMGN4O00479 90 aa14.24□□□□□ -0.13
SS18-216ENST00000580751 CXCR6O00574 342 aa14.24□□□□□ -0.13
SS18-216ENST00000580751 ARPC2O15144 300 aa14.24□□□□□ -0.13
SS18-216ENST00000580751 UGT2B11O75310 529 aa14.24□□□□□ -0.13
SS18-216ENST00000580751 FKBP6O75344 327 aa14.24□□□□□ -0.13
SS18-216ENST00000580751 PDE9AO76083 593 aa14.24□□□□□ -0.13
SS18-216ENST00000580751 IL33O95760 270 aa14.24□□□□□ -0.13
SS18-216ENST00000580751 TFPTP0C1Z6 253 aa14.24□□□□□ -0.13
SS18-216ENST00000580751 CCL3P10147 92 aa14.24□□□□□ -0.13
SS18-216ENST00000580751 UMPSP11172 480 aa14.24□□□□□ -0.13
SS18-216ENST00000580751 ETFAP13804 333 aa14.24□□□□□ -0.13
SS18-216ENST00000580751 CDK6Q00534 326 aa14.24□□□□□ -0.13
SS18-216ENST00000580751 COX20Q5RI15 118 aa14.24□□□□□ -0.13
SS18-216ENST00000580751 GLYATQ6IB77 296 aa14.24□□□□□ -0.13
SS18-216ENST00000580751 ZFP1Q6P2D0 407 aa14.24□□□□□ -0.13
SS18-216ENST00000580751 HIPK4Q8NE63 616 aa14.24□□□□□ -0.13
SS18-216ENST00000580751 OR5D16Q8NGK9 328 aa14.24□□□□□ -0.13
SS18-216ENST00000580751 PNPT1Q8TCS8 783 aaKnown RBP14.24□□□□□ -0.13
SS18-216ENST00000580751 SPPL2AQ8TCT8 520 aa14.24□□□□□ -0.13
SS18-216ENST00000580751 WDR60Q8WVS4 1066 aa14.24□□□□□ -0.13
SS18-216ENST00000580751 HGDQ93099 445 aa14.24□□□□□ -0.13
SS18-216ENST00000580751 EFHD2Q96C19 240 aaPredicted RBP14.24□□□□□ -0.13
SS18-216ENST00000580751 OTUB1Q96FW1 271 aaPredicted RBP14.24□□□□□ -0.13
SS18-216ENST00000580751 DUS3LQ96G46 650 aaKnown RBP14.24□□□□□ -0.13
SS18-216ENST00000580751 NSMCE2Q96MF7 247 aa14.24□□□□□ -0.13
SS18-216ENST00000580751 G6PC3Q9BUM1 346 aa14.24□□□□□ -0.13
SS18-216ENST00000580751 HES7Q9BYE0 225 aa14.24□□□□□ -0.13
SS18-216ENST00000580751 TRIM8Q9BZR9 551 aa14.24□□□□□ -0.13
SS18-216ENST00000580751 RASSF4Q9H2L5 321 aa14.24□□□□□ -0.13
SS18-216ENST00000580751 OR51I1Q9H343 314 aa14.24□□□□□ -0.13
SS18-216ENST00000580751 SERHL2Q9H4I8 314 aa14.24□□□□□ -0.13
SS18-216ENST00000580751 BCL2L10Q9HD36 194 aa14.24□□□□□ -0.13
SS18-216ENST00000580751 OLAHQ9NV23 265 aa14.24□□□□□ -0.13
SS18-216ENST00000580751 ANGPT4Q9Y264 503 aa14.24□□□□□ -0.13
SS18-216ENST00000580751 ANKRD33BA6NCL7 494 aa14.23□□□□□ -0.13
SS18-216ENST00000580751 KCNK2O95069 426 aa14.23□□□□□ -0.13
SS18-216ENST00000580751 RASAL1O95294 804 aa14.23□□□□□ -0.13
SS18-216ENST00000580751 GPIP06744 558 aa14.23□□□□□ -0.13
SS18-216ENST00000580751 C8BP07358 591 aa14.23□□□□□ -0.13
SS18-216ENST00000580751 LCN1P31025 176 aa14.23□□□□□ -0.13
SS18-216ENST00000580751 RFX3P48380 749 aa14.23□□□□□ -0.13
SS18-216ENST00000580751 SCARB2Q14108 478 aa14.23□□□□□ -0.13
SS18-216ENST00000580751 KPNB1Q14974 876 aaKnown RBP14.23□□□□□ -0.13
SS18-216ENST00000580751 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.23□□□□□ -0.13
SS18-216ENST00000580751 DCST2Q5T1A1 773 aa14.23□□□□□ -0.13
SS18-216ENST00000580751 HEPHL1Q6MZM0 1159 aa14.23□□□□□ -0.13
SS18-216ENST00000580751 REEP3Q6NUK4 255 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms