RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 PDK4Q16654 411 aa6.74□□□□□ -1.33
SMARCE1-217ENST00000580654 HIST2H2ACQ16777 129 aaPredicted RBP6.74□□□□□ -1.33
SMARCE1-217ENST00000580654 SWI5Q1ZZU3 235 aa6.74□□□□□ -1.33
SMARCE1-217ENST00000580654 TRMT12Q53H54 448 aaKnown RBP6.74□□□□□ -1.33
SMARCE1-217ENST00000580654 PAGE2BQ5JRK9 111 aa6.74□□□□□ -1.33
SMARCE1-217ENST00000580654 HIST2H2AA3Q6FI13 130 aa6.74□□□□□ -1.33
SMARCE1-217ENST00000580654 ZNF544Q6NX49 715 aa6.74□□□□□ -1.33
SMARCE1-217ENST00000580654 MED27Q6P2C8 311 aa6.74□□□□□ -1.33
SMARCE1-217ENST00000580654 DRICH1Q6PGQ1 229 aaPredicted RBP6.74□□□□□ -1.33
SMARCE1-217ENST00000580654 SLC22A25Q6T423 547 aa6.74□□□□□ -1.33
SMARCE1-217ENST00000580654 NPSR1Q6W5P4 371 aa6.74□□□□□ -1.33
SMARCE1-217ENST00000580654 TUSC5Q8IXB3 177 aa6.74□□□□□ -1.33
SMARCE1-217ENST00000580654 SVOPLQ8N434 492 aa6.74□□□□□ -1.33
SMARCE1-217ENST00000580654 RNF10Q8N5U6 811 aaKnown RBP6.74□□□□□ -1.33
SMARCE1-217ENST00000580654 ANKS4BQ8N8V4 417 aa6.74□□□□□ -1.33
SMARCE1-217ENST00000580654 ZDHHC22Q8N966 263 aa6.74□□□□□ -1.33
SMARCE1-217ENST00000580654 NUP43Q8NFH3 380 aa6.74□□□□□ -1.33
SMARCE1-217ENST00000580654 OR4N2Q8NGD1 307 aa6.74□□□□□ -1.33
SMARCE1-217ENST00000580654 OR4K14Q8NGD5 310 aa6.74□□□□□ -1.33
SMARCE1-217ENST00000580654 OR52R1Q8NGF1 315 aa6.74□□□□□ -1.33
SMARCE1-217ENST00000580654 HUS1BQ8NHY5 278 aa6.74□□□□□ -1.33
SMARCE1-217ENST00000580654 ABHD3Q8WU67 409 aa6.74□□□□□ -1.33
SMARCE1-217ENST00000580654 KCTD4Q8WVF5 259 aa6.74□□□□□ -1.33
SMARCE1-217ENST00000580654 MTBPQ96DY7 904 aa6.74□□□□□ -1.33
SMARCE1-217ENST00000580654 RADILQ96JH8 1075 aa6.74□□□□□ -1.33
SMARCE1-217ENST00000580654 LRRC1Q9BTT6 524 aa6.74□□□□□ -1.33
SMARCE1-217ENST00000580654 PIF1Q9H611 641 aa6.74□□□□□ -1.33
SMARCE1-217ENST00000580654 ANKRA2Q9H9E1 313 aa6.74□□□□□ -1.33
SMARCE1-217ENST00000580654 TPSG1Q9NRR2 321 aa6.74□□□□□ -1.33
SMARCE1-217ENST00000580654 PRSS50Q9UI38 385 aa6.74□□□□□ -1.33
SMARCE1-217ENST00000580654 POU2F3Q9UKI9 436 aa6.74□□□□□ -1.33
SMARCE1-217ENST00000580654 MCTS1Q9ULC4 181 aaKnown RBP6.74□□□□□ -1.33
SMARCE1-217ENST00000580654 CFL2Q9Y281 166 aa6.74□□□□□ -1.33
SMARCE1-217ENST00000580654 HEATR1Q9H583 2144 aaKnown RBP6.74□□□□□ -1.33
SMARCE1-217ENST00000580654 AKR1B15C9JRZ8 316 aaPredicted RBP6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 TNFSF11O14788 317 aa6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 ADAMDEC1O15204 470 aa6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 STK16O75716 305 aa6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 PGM3O95394 542 aa6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 CLDN9O95484 217 aa6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 STAMBPO95630 424 aa6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 TPM1P09493 284 aa6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 DHRS4L1P0CG22 281 aa6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 HKR1P10072 659 aa6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 PORP16435 677 aaPredicted RBP6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 PSMA4P25789 261 aaKnown RBP6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 CD40P25942 277 aa6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 APEX1P27695 318 aaKnown RBP6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 EVI2BP34910 448 aa6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 VPS41P49754 854 aa6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 ARFIP1P53367 373 aa6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 PNLIPRP2P54317 469 aa6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 MRPS35P82673 323 aaKnown RBP6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 SARNPP82979 210 aaKnown RBP6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 TAGLNQ01995 201 aaKnown RBP6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 STX5Q13190 355 aa6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 EFR3AQ14156 821 aa6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 CRYMQ14894 314 aa6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 LTB4RQ15722 352 aa6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 GLYR1Q49A26 553 aaPredicted RBP6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 FBLN7Q53RD9 439 aa6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 TIMM23BQ5SRD1 257 aa6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 LGSNQ5TDP6 509 aa6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 FAM45BPQ6NSW5 357 aa6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 LARP4Q71RC2 724 aaKnown RBP eCLIP6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 GALNT7Q86SF2 657 aa6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 ADAMTSL2Q86TH1 951 aa6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 TBC1D1Q86TI0 1168 aaPredicted RBP6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 TDRPQ86YL5 185 aa6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 CNGA4Q8IV77 575 aa6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 CCDC170Q8IYT3 715 aa6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 OR2W6PQ8NHA6 318 aa6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 FAM45AQ8TCE6 357 aa6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 RNF128Q8TEB7 428 aa6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 FBF1Q8TES7 1133 aa6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 EFHD2Q96C19 240 aaPredicted RBP6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 GBP4Q96PP9 640 aa6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 MTERF1Q99551 399 aaKnown RBP6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 PKP2Q99959 881 aa6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 INPP5KQ9BT40 448 aa6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 WDR41Q9HAD4 459 aa6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 PLAC1Q9HBJ0 212 aa6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 SAYSD1Q9NPB0 183 aa6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 CTNNAL1Q9UBT7 734 aa6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 CES1P1Q9UKY3 287 aa6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 MGAT4BQ9UQ53 548 aa6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 SPEF1Q9Y4P9 236 aa6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 FKBP7Q9Y680 259 aa6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 PMF1-BGLAPU3KQ54 211 aa6.73□□□□□ -1.33
SMARCE1-217ENST00000580654 NPIPA5A0A0B4J1W7 369 aa6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 NPIPA7E9PJI5 369 aa6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 GOLGA6L19H0YKK7 550 aa6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 WISP3O95389 354 aaPredicted RBP6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 SLU7O95391 586 aaKnown RBP6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 SYNGR4O95473 234 aa6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 MBD3O95983 291 aa6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 S100BP04271 92 aaPredicted RBP6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 ATP1B1P05026 303 aa6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 TPM3P06753 285 aa6.72□□□□□ -1.33
SMARCE1-217ENST00000580654 NPIPA8P0DM63 369 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms