RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 KLHL4Q9C0H6 718 aa6.44□□□□□ -1.38
CDK5RAP3-209ENST00000578663 RPF2Q9H7B2 306 aaKnown RBP6.44□□□□□ -1.38
CDK5RAP3-209ENST00000578663 ZNF696Q9H7X3 374 aa6.44□□□□□ -1.38
CDK5RAP3-209ENST00000578663 MED4Q9NPJ6 270 aa6.44□□□□□ -1.38
CDK5RAP3-209ENST00000578663 HEY2Q9UBP5 337 aa6.44□□□□□ -1.38
CDK5RAP3-209ENST00000578663 PHF11Q9UIL8 331 aa6.44□□□□□ -1.38
CDK5RAP3-209ENST00000578663 PROCRQ9UNN8 238 aa6.44□□□□□ -1.38
CDK5RAP3-209ENST00000578663 MAGED1Q9Y5V3 778 aaPredicted RBP6.44□□□□□ -1.38
CDK5RAP3-209ENST00000578663 SNX8Q9Y5X2 465 aa6.44□□□□□ -1.38
CDK5RAP3-209ENST00000578663 SACSQ9NZJ4 4579 aa6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 PRAMEF25A6NGN4 478 aa6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 NPHS1O60500 1241 aa6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 ICOSLGO75144 302 aa6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 TNFRSF21O75509 655 aa6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 CLDN9O95484 217 aa6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 ESRRBO95718 433 aa6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 GPR75O95800 540 aa6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 OTCP00480 354 aa6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 ABCB1P08183 1280 aaPredicted RBP6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 IGHV4-31P0DP07 118 aa6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 PCNAP12004 261 aa6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 NEFHP12036 1026 aa6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 PEPDP12955 493 aa6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 ZNF16P17020 682 aaPredicted RBP6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 SERPINB1P30740 379 aa6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 TLX1P31314 330 aaPredicted RBP6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 CDKN1AP38936 164 aa6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 PTGDSP41222 190 aa6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 CASP2P42575 452 aa6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 SSR2P43308 183 aa6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 GZMKP49863 264 aa6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 HTR6P50406 440 aa6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 FOXA1P55317 472 aa6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 ABCE1P61221 599 aaKnown RBP6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 SIRPAP78324 504 aa6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 BST1Q10588 318 aa6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 CPSF6Q16630 551 aaKnown RBP eCLIP6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 ZNF672Q499Z4 452 aaPredicted RBP6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 GGTA1PQ4G0N0 100 aa6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 ARL13AQ5H913 290 aaPredicted RBP6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 LIPJQ5W064 366 aa6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 ANKRD34AQ69YU3 496 aa6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 NUP54Q7Z3B4 507 aa6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 PLCZ1Q86YW0 608 aa6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 OR4N5Q8IXE1 308 aa6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 LAS2Q8IYD9 372 aa6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 CDYL2Q8N8U2 506 aa6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 WDSUB1Q8N9V3 476 aa6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 OR6K3Q8NGY3 331 aa6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 LILRB1Q8NHL6 650 aaPredicted RBP6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 ZFAND2BQ8WV99 257 aa6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 RIT1Q92963 219 aa6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 HGDQ93099 445 aa6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 ADIPOR1Q96A54 375 aa6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 PPWD1Q96BP3 646 aaKnown RBP6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 F2RL3Q96RI0 385 aa6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 TACO1Q9BSH4 297 aaKnown RBP6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 TRAF4Q9BUZ4 470 aaPredicted RBP6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 MS4A8Q9BY19 250 aa6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 ACTR6Q9GZN1 396 aa6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 C20orf27Q9GZN8 174 aa6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 ALG2Q9H553 416 aa6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 MID1IP1Q9NPA3 183 aa6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 NGBQ9NPG2 151 aa6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 INTS9Q9NV88 658 aaKnown RBP6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 FAIMQ9NVQ4 179 aa6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 ZNF490Q9ULM2 529 aaPredicted RBP6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 KCNS2Q9ULS6 477 aa6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 GPR52Q9Y2T5 361 aa6.43□□□□□ -1.38
CDK5RAP3-209ENST00000578663 FAM234BA2RU67 622 aa6.42□□□□□ -1.38
CDK5RAP3-209ENST00000578663 TMEM114B3SHH9 223 aa6.42□□□□□ -1.38
CDK5RAP3-209ENST00000578663 TMEM233B4DJY2 109 aa6.42□□□□□ -1.38
CDK5RAP3-209ENST00000578663 H0YIV9 168 aa6.42□□□□□ -1.38
CDK5RAP3-209ENST00000578663 LINC01387J3KSC0 135 aa6.42□□□□□ -1.38
CDK5RAP3-209ENST00000578663 ACOX3O15254 700 aa6.42□□□□□ -1.38
CDK5RAP3-209ENST00000578663 TCF21O43680 179 aa6.42□□□□□ -1.38
CDK5RAP3-209ENST00000578663 UGDHO60701 494 aa6.42□□□□□ -1.38
CDK5RAP3-209ENST00000578663 NDUFS7O75251 213 aa6.42□□□□□ -1.38
CDK5RAP3-209ENST00000578663 SH3BGRLO75368 114 aa6.42□□□□□ -1.38
CDK5RAP3-209ENST00000578663 AIFM1O95831 613 aa6.42□□□□□ -1.38
CDK5RAP3-209ENST00000578663 ENO1P06733 434 aaKnown RBP6.42□□□□□ -1.38
CDK5RAP3-209ENST00000578663 CD3EP07766 207 aa6.42□□□□□ -1.38
CDK5RAP3-209ENST00000578663 CSF3P09919 207 aa6.42□□□□□ -1.38
CDK5RAP3-209ENST00000578663 SLC35E2P0CK97 266 aa6.42□□□□□ -1.38
CDK5RAP3-209ENST00000578663 IL11P20809 199 aa6.42□□□□□ -1.38
CDK5RAP3-209ENST00000578663 BUD31P41223 144 aaPredicted RBP6.42□□□□□ -1.38
CDK5RAP3-209ENST00000578663 SLC1A6P48664 564 aa6.42□□□□□ -1.38
CDK5RAP3-209ENST00000578663 STARP49675 285 aa6.42□□□□□ -1.38
CDK5RAP3-209ENST00000578663 COMPP49747 757 aaPredicted RBP6.42□□□□□ -1.38
CDK5RAP3-209ENST00000578663 NEK2P51955 445 aa6.42□□□□□ -1.38
CDK5RAP3-209ENST00000578663 ARFIP1P53367 373 aa6.42□□□□□ -1.38
CDK5RAP3-209ENST00000578663 NUDT6P53370 316 aa6.42□□□□□ -1.38
CDK5RAP3-209ENST00000578663 PKNOX1P55347 436 aa6.42□□□□□ -1.38
CDK5RAP3-209ENST00000578663 NAA20P61599 178 aa6.42□□□□□ -1.38
CDK5RAP3-209ENST00000578663 STX3Q13277 289 aa6.42□□□□□ -1.38
CDK5RAP3-209ENST00000578663 LAPTM5Q13571 262 aa6.42□□□□□ -1.38
CDK5RAP3-209ENST00000578663 DDX39BQ13838 428 aaKnown RBP6.42□□□□□ -1.38
CDK5RAP3-209ENST00000578663 AP5B1Q2VPB7 878 aa6.42□□□□□ -1.38
CDK5RAP3-209ENST00000578663 PGGHGQ32M88 737 aa6.42□□□□□ -1.38
CDK5RAP3-209ENST00000578663 FBLN7Q53RD9 439 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms