RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 AKR7A2O43488 359 aa12.79□□□□□ -0.36
NDEL1-204ENST00000578172 KLHL18O94889 574 aa12.79□□□□□ -0.36
NDEL1-204ENST00000578172 GABRA3P34903 492 aa12.79□□□□□ -0.36
NDEL1-204ENST00000578172 CRYBB2P43320 205 aa12.79□□□□□ -0.36
NDEL1-204ENST00000578172 MAGEB1P43366 347 aa12.79□□□□□ -0.36
NDEL1-204ENST00000578172 EPHA5P54756 1037 aa12.79□□□□□ -0.36
NDEL1-204ENST00000578172 PCBP3P57721 371 aaKnown RBP12.79□□□□□ -0.36
NDEL1-204ENST00000578172 TRAM2Q15035 370 aa12.79□□□□□ -0.36
NDEL1-204ENST00000578172 BCL2L15Q5TBC7 163 aa12.79□□□□□ -0.36
NDEL1-204ENST00000578172 CXXC5Q7LFL8 322 aaKnown RBP12.79□□□□□ -0.36
NDEL1-204ENST00000578172 CDK20Q8IZL9 346 aa12.79□□□□□ -0.36
NDEL1-204ENST00000578172 OR13C2Q8NGS9 318 aa12.79□□□□□ -0.36
NDEL1-204ENST00000578172 OR4K13Q8NH42 304 aa12.79□□□□□ -0.36
NDEL1-204ENST00000578172 SLC41A3Q96GZ6 507 aa12.79□□□□□ -0.36
NDEL1-204ENST00000578172 HOXD1Q9GZZ0 328 aa12.79□□□□□ -0.36
NDEL1-204ENST00000578172 FGF22Q9HCT0 170 aa12.79□□□□□ -0.36
NDEL1-204ENST00000578172 REV1Q9UBZ9 1251 aa12.79□□□□□ -0.36
NDEL1-204ENST00000578172 KLK4Q9Y5K2 254 aa12.79□□□□□ -0.36
NDEL1-204ENST00000578172 RP1P56715 2156 aa12.78□□□□□ -0.36
NDEL1-204ENST00000578172 FAM172BPA6NC97 362 aa12.78□□□□□ -0.36
NDEL1-204ENST00000578172 RAD1O60671 282 aa12.78□□□□□ -0.36
NDEL1-204ENST00000578172 OR2B3O76000 313 aa12.78□□□□□ -0.36
NDEL1-204ENST00000578172 ATP12AP54707 1039 aa12.78□□□□□ -0.36
NDEL1-204ENST00000578172 SNRPNP63162 240 aaKnown RBP12.78□□□□□ -0.36
NDEL1-204ENST00000578172 NDUFAF6Q330K2 333 aa12.78□□□□□ -0.36
NDEL1-204ENST00000578172 TP53I3Q53FA7 332 aa12.78□□□□□ -0.36
NDEL1-204ENST00000578172 PRPF38BQ5VTL8 546 aaKnown RBP12.78□□□□□ -0.36
NDEL1-204ENST00000578172 KIAA1211LQ6NV74 962 aa12.78□□□□□ -0.36
NDEL1-204ENST00000578172 KIF18BQ86Y91 864 aa12.78□□□□□ -0.36
NDEL1-204ENST00000578172 KLHL36Q8N4N3 616 aa12.78□□□□□ -0.36
NDEL1-204ENST00000578172 NANOGP1Q8N7R0 232 aa12.78□□□□□ -0.36
NDEL1-204ENST00000578172 SLC37A3Q8NCC5 494 aa12.78□□□□□ -0.36
NDEL1-204ENST00000578172 IL17RDQ8NFM7 739 aa12.78□□□□□ -0.36
NDEL1-204ENST00000578172 SETD7Q8WTS6 366 aaKnown RBP12.78□□□□□ -0.36
NDEL1-204ENST00000578172 KATNB1Q9BVA0 655 aa12.78□□□□□ -0.36
NDEL1-204ENST00000578172 ING4Q9UNL4 249 aa12.78□□□□□ -0.36
NDEL1-204ENST00000578172 OR6C74A6NCV1 312 aa12.78□□□□□ -0.36
NDEL1-204ENST00000578172 VEGFDO43915 354 aa12.78□□□□□ -0.36
NDEL1-204ENST00000578172 SRPRAP08240 638 aaKnown RBP12.78□□□□□ -0.36
NDEL1-204ENST00000578172 SLC35G6P0C7Q6 338 aa12.78□□□□□ -0.36
NDEL1-204ENST00000578172 GJA4P35212 333 aa12.78□□□□□ -0.36
NDEL1-204ENST00000578172 UGT2B10P36537 528 aa12.78□□□□□ -0.36
NDEL1-204ENST00000578172 HTR3AP46098 478 aa12.78□□□□□ -0.36
NDEL1-204ENST00000578172 MAP2K3P46734 347 aa12.78□□□□□ -0.36
NDEL1-204ENST00000578172 SOX2P48431 317 aa12.78□□□□□ -0.36
NDEL1-204ENST00000578172 MLF2Q15773 248 aaPredicted RBP12.78□□□□□ -0.36
NDEL1-204ENST00000578172 AKIRIN2Q53H80 203 aa12.78□□□□□ -0.36
NDEL1-204ENST00000578172 UBE3DQ7Z6J8 389 aa12.78□□□□□ -0.36
NDEL1-204ENST00000578172 OR5H6Q8NGV6 325 aa12.78□□□□□ -0.36
NDEL1-204ENST00000578172 RASSF5Q8WWW0 418 aa12.78□□□□□ -0.36
NDEL1-204ENST00000578172 NDOR1Q9UHB4 597 aa12.78□□□□□ -0.36
NDEL1-204ENST00000578172 PPP1R3DO95685 299 aa12.78□□□□□ -0.36
NDEL1-204ENST00000578172 EML2O95834 649 aa12.78□□□□□ -0.36
NDEL1-204ENST00000578172 RECKO95980 971 aa12.78□□□□□ -0.36
NDEL1-204ENST00000578172 CSF3P09919 207 aa12.78□□□□□ -0.36
NDEL1-204ENST00000578172 GABRB1P18505 474 aa12.78□□□□□ -0.36
NDEL1-204ENST00000578172 ATP5A1P25705 553 aaKnown RBP12.78□□□□□ -0.36
NDEL1-204ENST00000578172 CLDN12P56749 244 aa12.78□□□□□ -0.36
NDEL1-204ENST00000578172 PSPHP78330 225 aa12.78□□□□□ -0.36
NDEL1-204ENST00000578172 RGS1Q08116 209 aa12.78□□□□□ -0.36
NDEL1-204ENST00000578172 DSG2Q14126 1118 aa12.78□□□□□ -0.36
NDEL1-204ENST00000578172 ANKRD33Q7Z3H0 272 aa12.78□□□□□ -0.36
NDEL1-204ENST00000578172 CEACAM19Q7Z692 300 aa12.78□□□□□ -0.36
NDEL1-204ENST00000578172 NRSN1Q8IZ57 195 aa12.78□□□□□ -0.36
NDEL1-204ENST00000578172 PROKR2Q8NFJ6 384 aa12.78□□□□□ -0.36
NDEL1-204ENST00000578172 OR2A1Q8NGT9 310 aa12.78□□□□□ -0.36
NDEL1-204ENST00000578172 EFHD2Q96C19 240 aaPredicted RBP12.78□□□□□ -0.36
NDEL1-204ENST00000578172 PLCXD1Q9NUJ7 323 aa12.78□□□□□ -0.36
NDEL1-204ENST00000578172 CCDC59Q9P031 241 aaKnown RBP12.78□□□□□ -0.36
NDEL1-204ENST00000578172 APOBEC3BQ9UH17 382 aaKnown RBP12.78□□□□□ -0.36
NDEL1-204ENST00000578172 RABL2BQ9UNT1 228 aa12.78□□□□□ -0.36
NDEL1-204ENST00000578172 TP53BP1Q12888 1972 aaPredicted RBP12.78□□□□□ -0.36
NDEL1-204ENST00000578172 SNRNP200O75643 2136 aaKnown RBP12.77□□□□□ -0.36
NDEL1-204ENST00000578172 ZNF670-ZNF695F2Z2N8 137 aa12.77□□□□□ -0.36
NDEL1-204ENST00000578172 HNRNPFP52597 415 aaKnown RBP12.77□□□□□ -0.36
NDEL1-204ENST00000578172 CCDC58Q4VC31 144 aa12.77□□□□□ -0.36
NDEL1-204ENST00000578172 C11orf88Q6PI97 169 aa12.77□□□□□ -0.36
NDEL1-204ENST00000578172 SUN3Q8TAQ9 357 aa12.77□□□□□ -0.36
NDEL1-204ENST00000578172 TMEM168Q9H0V1 697 aa12.77□□□□□ -0.36
NDEL1-204ENST00000578172 MED28Q9H204 178 aa12.77□□□□□ -0.36
NDEL1-204ENST00000578172 OR10H1Q9Y4A9 318 aa12.77□□□□□ -0.36
NDEL1-204ENST00000578172 A0A0G2JMP0 313 aa12.77□□□□□ -0.37
NDEL1-204ENST00000578172 A0A0X1KG70 313 aa12.77□□□□□ -0.37
NDEL1-204ENST00000578172 TEX46H3BTG2 121 aa12.77□□□□□ -0.37
NDEL1-204ENST00000578172 ICMTO60725 284 aa12.77□□□□□ -0.37
NDEL1-204ENST00000578172 HCN1O60741 890 aa12.77□□□□□ -0.37
NDEL1-204ENST00000578172 UBXN7O94888 489 aa12.77□□□□□ -0.37
NDEL1-204ENST00000578172 NUDT14O95848 222 aa12.77□□□□□ -0.37
NDEL1-204ENST00000578172 TBX6O95947 436 aaPredicted RBP12.77□□□□□ -0.37
NDEL1-204ENST00000578172 SLC1A3P43003 542 aa12.77□□□□□ -0.37
NDEL1-204ENST00000578172 VSX2P58304 361 aaPredicted RBP12.77□□□□□ -0.37
NDEL1-204ENST00000578172 EEF1A2Q05639 463 aaKnown RBP12.77□□□□□ -0.37
NDEL1-204ENST00000578172 YIPF7Q8N8F6 280 aa12.77□□□□□ -0.37
NDEL1-204ENST00000578172 OR4M2Q8NGB6 313 aa12.77□□□□□ -0.37
NDEL1-204ENST00000578172 AP3S1Q92572 193 aa12.77□□□□□ -0.37
NDEL1-204ENST00000578172 HINT3Q9NQE9 182 aaKnown RBP12.77□□□□□ -0.37
NDEL1-204ENST00000578172 ENAMQ9NRM1 1142 aa12.77□□□□□ -0.37
NDEL1-204ENST00000578172 CNOT2Q9NZN8 540 aaKnown RBP12.77□□□□□ -0.37
NDEL1-204ENST00000578172 ANAPC1Q9H1A4 1944 aa12.77□□□□□ -0.37
NDEL1-204ENST00000578172 TRIM64BA6NI03 449 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms