RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 EQTNQ9NQ60 294 aa14.58□□□□□ -0.08
VAPA-204ENST00000577901 ZCCHC3Q9NUD5 404 aaKnown RBP14.58□□□□□ -0.08
VAPA-204ENST00000577901 GOLGA8QA0A0J9YX86 632 aa14.57□□□□□ -0.08
VAPA-204ENST00000577901 GOLGA8OA6NCC3 632 aa14.57□□□□□ -0.08
VAPA-204ENST00000577901 PRAMEF25A6NGN4 478 aa14.57□□□□□ -0.08
VAPA-204ENST00000577901 AHRRA9YTQ3 701 aa14.57□□□□□ -0.08
VAPA-204ENST00000577901 GOLGA8NF8WBI6 632 aa14.57□□□□□ -0.08
VAPA-204ENST00000577901 ICOSLGO75144 302 aa14.57□□□□□ -0.08
VAPA-204ENST00000577901 KCNH1O95259 989 aa14.57□□□□□ -0.08
VAPA-204ENST00000577901 GDF1P27539 372 aa14.57□□□□□ -0.08
VAPA-204ENST00000577901 DGKQP52824 942 aa14.57□□□□□ -0.08
VAPA-204ENST00000577901 CLNS1AP54105 237 aaKnown RBP14.57□□□□□ -0.08
VAPA-204ENST00000577901 SPDYE7PQ495Y7 208 aa14.57□□□□□ -0.08
VAPA-204ENST00000577901 ACSF3Q4G176 576 aaPredicted RBP14.57□□□□□ -0.08
VAPA-204ENST00000577901 NXNQ6DKJ4 435 aa14.57□□□□□ -0.08
VAPA-204ENST00000577901 DESI1Q6ICB0 168 aa14.57□□□□□ -0.08
VAPA-204ENST00000577901 NAXEQ8NCW5 288 aa14.57□□□□□ -0.08
VAPA-204ENST00000577901 VPS37AQ8NEZ2 397 aa14.57□□□□□ -0.08
VAPA-204ENST00000577901 TNIP2Q8NFZ5 429 aa14.57□□□□□ -0.08
VAPA-204ENST00000577901 OR1J4Q8NGS1 313 aa14.57□□□□□ -0.08
VAPA-204ENST00000577901 MOAP1Q96BY2 351 aa14.57□□□□□ -0.08
VAPA-204ENST00000577901 EFHD2Q96C19 240 aaPredicted RBP14.57□□□□□ -0.08
VAPA-204ENST00000577901 ALPK1Q96QP1 1244 aa14.57□□□□□ -0.08
VAPA-204ENST00000577901 WDR55Q9H6Y2 383 aaPredicted RBP14.57□□□□□ -0.08
VAPA-204ENST00000577901 NEUROD4Q9HD90 331 aa14.57□□□□□ -0.08
VAPA-204ENST00000577901 INTS9Q9NV88 658 aaKnown RBP14.57□□□□□ -0.08
VAPA-204ENST00000577901 PCDHGB4Q9UN71 923 aa14.57□□□□□ -0.08
VAPA-204ENST00000577901 PRRC2AP48634 2157 aaKnown RBP14.57□□□□□ -0.08
VAPA-204ENST00000577901 C15orf38-AP3S2A0A0A6YYH1 394 aa14.56□□□□□ -0.08
VAPA-204ENST00000577901 KDM4EB2RXH2 506 aaPredicted RBP14.56□□□□□ -0.08
VAPA-204ENST00000577901 TRAPPC6AO75865 159 aa14.56□□□□□ -0.08
VAPA-204ENST00000577901 SASH3O75995 380 aa14.56□□□□□ -0.08
VAPA-204ENST00000577901 C6orf47O95873 294 aa14.56□□□□□ -0.08
VAPA-204ENST00000577901 EPPINO95925 133 aa14.56□□□□□ -0.08
VAPA-204ENST00000577901 ALOX5P09917 674 aa14.56□□□□□ -0.08
VAPA-204ENST00000577901 EPHA3P29320 983 aa14.56□□□□□ -0.08
VAPA-204ENST00000577901 CEACAM8P31997 349 aaPredicted RBP14.56□□□□□ -0.08
VAPA-204ENST00000577901 CCT3P49368 545 aaKnown RBP14.56□□□□□ -0.08
VAPA-204ENST00000577901 CLK3P49761 638 aaKnown RBP14.56□□□□□ -0.08
VAPA-204ENST00000577901 WNT3P56703 355 aa14.56□□□□□ -0.08
VAPA-204ENST00000577901 TOMM20Q15388 145 aa14.56□□□□□ -0.08
VAPA-204ENST00000577901 FBXL19-AS1Q494R0 122 aa14.56□□□□□ -0.08
VAPA-204ENST00000577901 ANXA8L1Q5VT79 327 aa14.56□□□□□ -0.08
VAPA-204ENST00000577901 TIGD3Q6B0B8 471 aa14.56□□□□□ -0.08
VAPA-204ENST00000577901 BHLHB9Q6PI77 547 aa14.56□□□□□ -0.08
VAPA-204ENST00000577901 ANGPTL8Q6UXH0 198 aa14.56□□□□□ -0.08
VAPA-204ENST00000577901 OR8J2Q8NGG1 315 aa14.56□□□□□ -0.08
VAPA-204ENST00000577901 OR56A1Q8NGH5 318 aa14.56□□□□□ -0.08
VAPA-204ENST00000577901 PSMA8Q8TAA3 256 aa14.56□□□□□ -0.08
VAPA-204ENST00000577901 NUDT8Q8WV74 236 aa14.56□□□□□ -0.08
VAPA-204ENST00000577901 SLC9A6Q92581 669 aa14.56□□□□□ -0.08
VAPA-204ENST00000577901 HOXB13Q92826 284 aaPredicted RBP14.56□□□□□ -0.08
VAPA-204ENST00000577901 MBD6Q96DN6 1003 aa14.56□□□□□ -0.08
VAPA-204ENST00000577901 FAM120BQ96EK7 910 aaKnown RBP14.56□□□□□ -0.08
VAPA-204ENST00000577901 DTNBP1Q96EV8 351 aa14.56□□□□□ -0.08
VAPA-204ENST00000577901 C7orf26Q96N11 449 aa14.56□□□□□ -0.08
VAPA-204ENST00000577901 GNRHR2Q96P88 292 aa14.56□□□□□ -0.08
VAPA-204ENST00000577901 GSX1Q9H4S2 264 aaPredicted RBP14.56□□□□□ -0.08
VAPA-204ENST00000577901 DLL4Q9NR61 685 aa14.56□□□□□ -0.08
VAPA-204ENST00000577901 SIRT3Q9NTG7 399 aaPredicted RBP14.56□□□□□ -0.08
VAPA-204ENST00000577901 ZNF629Q9UEG4 869 aaPredicted RBP14.56□□□□□ -0.08
VAPA-204ENST00000577901 C15orf41Q9Y2V0 281 aa14.56□□□□□ -0.08
VAPA-204ENST00000577901 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.55□□□□□ -0.08
VAPA-204ENST00000577901 C2orf72A6NCS6 295 aa14.55□□□□□ -0.08
VAPA-204ENST00000577901 RNASET2O00584 256 aaKnown RBP14.55□□□□□ -0.08
VAPA-204ENST00000577901 GNB5O14775 395 aa14.55□□□□□ -0.08
VAPA-204ENST00000577901 SOX30O94993 753 aa14.55□□□□□ -0.08
VAPA-204ENST00000577901 NKX2-2O95096 273 aa14.55□□□□□ -0.08
VAPA-204ENST00000577901 IL33O95760 270 aa14.55□□□□□ -0.08
VAPA-204ENST00000577901 CYP4B1P13584 511 aa14.55□□□□□ -0.08
VAPA-204ENST00000577901 TIMP3P35625 211 aa14.55□□□□□ -0.08
VAPA-204ENST00000577901 PTGDSP41222 190 aa14.55□□□□□ -0.08
VAPA-204ENST00000577901 RFX3P48380 749 aa14.55□□□□□ -0.08
VAPA-204ENST00000577901 ADAM8P78325 824 aa14.55□□□□□ -0.08
VAPA-204ENST00000577901 CRYZQ08257 329 aaKnown RBP14.55□□□□□ -0.08
VAPA-204ENST00000577901 DAZAP2Q15038 168 aaPredicted RBP14.55□□□□□ -0.08
VAPA-204ENST00000577901 DPY19L1Q2PZI1 675 aa14.55□□□□□ -0.08
VAPA-204ENST00000577901 OR4F3Q6IEY1 312 aa14.55□□□□□ -0.08
VAPA-204ENST00000577901 MFSD12Q6NUT3 480 aa14.55□□□□□ -0.08
VAPA-204ENST00000577901 POMZP3Q6PJE2 187 aa14.55□□□□□ -0.08
VAPA-204ENST00000577901 PAMR1Q6UXH9 720 aa14.55□□□□□ -0.08
VAPA-204ENST00000577901 LACC1Q8IV20 430 aa14.55□□□□□ -0.08
VAPA-204ENST00000577901 ACTRT2Q8TDY3 377 aa14.55□□□□□ -0.08
VAPA-204ENST00000577901 TESCQ96BS2 214 aa14.55□□□□□ -0.08
VAPA-204ENST00000577901 NTNG2Q96CW9 530 aa14.55□□□□□ -0.08
VAPA-204ENST00000577901 GIMAP5Q96F15 307 aa14.55□□□□□ -0.08
VAPA-204ENST00000577901 MAELQ96JY0 434 aaKnown RBP14.55□□□□□ -0.08
VAPA-204ENST00000577901 ZBTB18Q99592 522 aa14.55□□□□□ -0.08
VAPA-204ENST00000577901 TIMP4Q99727 224 aa14.55□□□□□ -0.08
VAPA-204ENST00000577901 GALNT9Q9HCQ5 603 aa14.55□□□□□ -0.08
VAPA-204ENST00000577901 SDHAF3Q9NRP4 125 aa14.55□□□□□ -0.08
VAPA-204ENST00000577901 AIG1Q9NVV5 245 aa14.55□□□□□ -0.08
VAPA-204ENST00000577901 FOXD3Q9UJU5 478 aaPredicted RBP14.55□□□□□ -0.08
VAPA-204ENST00000577901 FAF1Q9UNN5 650 aaPredicted RBP14.55□□□□□ -0.08
VAPA-204ENST00000577901 USH1CQ9Y6N9 552 aa14.55□□□□□ -0.08
VAPA-204ENST00000577901 PRSS51A0A1B0GVH4 220 aa14.54□□□□□ -0.08
VAPA-204ENST00000577901 SNPHO15079 494 aa14.54□□□□□ -0.08
VAPA-204ENST00000577901 ANKRD28O15084 1053 aa14.54□□□□□ -0.08
VAPA-204ENST00000577901 CBR3O75828 277 aa14.54□□□□□ -0.08
VAPA-204ENST00000577901 IL2RAP01589 272 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms